Esox lucius (northern pike): 105011833
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Entry
105011833 CDS
T04894
Symbol
fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
els
Esox lucius (northern pike)
Pathway
els03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105011833 (fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105011833 (fip1l1)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105011833 (fip1l1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
105011833
NCBI-ProteinID:
XP_010870525
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Position
LG08:21203394..21223656
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AA seq
532 aa
AA seq
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MQCLATVKFLFTRGGMSTEETDKATDASGGDEEEWLYGDESEEKVEDEAPNGSVKCDSEK
PQPPAEEVHEIKDVKQDSGQEDEESDSEDDDNDVCVTIGAITTGGLCQSFSAFGSTPVNL
NIKTAGRTHASAGPKPKGLDLDAQGNVNGIPVLEVDLETLEEKPWRRPGSDLSDYFNYGF
NEDTWKAYCEKQKRLRMGYDGINHSASAAKIMVHQGRSSLGDGALPCFRSDYSSPSKPAS
SSRKSSSTIDVIGGQTGTISRVEGRRRHSVDGNNIQVLSEPSSDADPTPTKISPFYPPNI
PPPPFLPPSHNVSSAPPLIPPPRIPISIPPPGYPPGAPPPSLIPSLDCGRSGGYDGRSAP
VYPPFPPGVYPPPPPPPPGSTTASWAGVFDSAKAWEYYARRDSERERHKERDRTRDRGHD
KDREREHSPSAQACSDEERRRRRDSGERGYERHHHHRDRTTRDNEDRHREKRHRDKEERR
YKSSRSSRRRHDSEEGDSHPRHKHKKAKRSRDDKEPSQELSADQENQSEPTE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtctagcaactgtcaagttcttattcacaagaggaggcatgtccacagaagaa
acagataaagctactgatgcgagcgggggcgatgaagaagaatggttatatggagatgag
agtgaggagaaggtagaggacgaggcacctaatggttcagtgaagtgtgacagtgagaag
ccccagccgcctgctgaggaggtccatgagattaaagacgtaaagcaggattcaggccag
gaagatgaagagagtgacagtgaggatgatgataatgacgtttgtgtaaccattggagct
ataacaaccggtggcttgtgtcagtcgttcagtgccttcggatccacgcctgttaatctc
aacattaagactgcaggacgaacacatgcgtcagctggccccaaaccaaaaggactggac
ctggacgcgcagggcaacgtcaatggaatcccagtgttggaggtggacctggagactttg
gaagagaagccgtggagaaggcctggctcggacctctcggactacttcaactacggcttc
aatgaagacacctggaaagcctactgtgagaagcagaagagactacgcatggggtatgac
ggcataaaccactcggcttcagccgctaaaatcatggtccaccagggacgttcaagcctt
ggagatggggccctcccctgctttaggtcggactactcctcccccagcaaaccagcctcc
tccagtagaaagtccagcagcaccatcgatgttattggaggacaaactggtaccatcagc
cgggtagaaggacggcgacgtcacagcgttgatggaaataacatccaggttctttctgag
ccctcctctgatgctgaccctactcccactaagatatcccctttctacccccccaacatc
ccccctcctcctttcctgcctccatcccacaatgtcagctccgcccctccactcattcct
ccgccacggatccccatcagtattcctccacctggctaccctcctggggcaccccctccc
tctttgatcccttcactagactgtggacgctctggaggctacgatggtcgctcggcacca
gtgtacccccccttccctccaggtgtttaccctccgccccctcctccccccccgggcagc
accacagcctcctgggctggggttttcgacagtgccaaggcctgggagtactatgcccgt
cgggacagcgagcgggagcgccacaaggagagagatcggaccagagatcgcggacatgac
aaagaccgggagagagagcacagcccgtccgcccaggcctgcagtgacgaggagcggcgc
cggcgcagggactccggagagagaggatacgagcggcaccaccaccaccgagacagaacc
acccgggacaacgaagaccgacaccgagagaaaagacacagagacaaggaggagagaaga
tacaagtcctcacgcagcagcaggaggagacatgacagtgaggaaggggacagccatccg
aggcacaaacacaagaaggccaagaggagcagagatgacaaggagccaagccaggaactc
tccgctgaccaggagaaccagtcagagcccaccgagtga
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