Esox lucius (northern pike): 105013188
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Entry
105013188 CDS
T04894
Name
(RefSeq) nucleosome-remodeling factor subunit BPTF isoform X1
KO
K11728
nucleosome-remodeling factor subunit BPTF
Organism
els
Esox lucius (northern pike)
Pathway
els03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105013188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
els03036
]
105013188
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
105013188
NuRF complex (fruit fly)
105013188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
PHD
DDT
WSD
Pentapeptide_4
PHD_5
WHIM1
Arc_PepC_II
Motif
Other DBs
NCBI-GeneID:
105013188
NCBI-ProteinID:
XP_028979013
LinkDB
All DBs
Position
LG11:19665610..19694719
Genome browser
AA seq
3064 aa
AA seq
DB search
MRGRRGRPPKTLLMQEPSSGSERGLRPRRGLRAKGRGSAEVDSESPKRGNNPSTRGKRKV
GSTVSRGRGRGRGGGGGRGRGRRSIARSVVYDDHESDEDDDAVSLRSEEDELIEEEPITD
EEEEALNEESDPLEEILEDDDDASYCTESSFRSQSTHGSTPGRRRTRVHRPRSPIFEEKE
IPPLVLPRSSEDLMVPSEELLNVSSIYEVLRNFSAVLRLSPFRFEDFCAALVSQEQCTLM
AETHTALMKAILREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVVRAYCESDQEYHHV
LPYQEIEDYPYGPLDSKIKVLQFLVDQFLTTNIAREELMSEGVVQYDDHCRVCHRLGDLL
CCETCSAVYHLECVKPPLEEVPEDEWQCEICAAHKVPGVVDCLTEMQKNKPYIRQEPIGY
DRHRRKYWFLNRRIVVEEDGEQDKKNIWYYSTKVQLVELIDCLDKEYWENDLCAVLEEMR
EEVHAHMDITEDLTNKARGNNKTFLTAANEEILERVQSKQERPTGEQAGVAEQAGADDSS
NTNSTKTDRETPPESSARPDHGALKDSQSKEEPSSQARAPAAGKDSTTIHPEPPVSGSST
QDHTLPKPESPKPAEVSRSAPSGSGESGEVPMEPEQQRPDNKPVDSESRGDPPPPVHPPT
HTAAENSNSSHTSVPGGLRGPAEPNAVDGSSQVSISSQEDTGEDNETLNDELSGRGNNRM
VTRLRNPDSKLNLLKTNGDGSPAPKDSVETSLPSSESEASRLGAVRKELVGKGNLNGFFK
LGQEGKYRVYQNQYSTNPLGLNKHQHREDHDKRRHLSHKFSLTPAGEFKWNGSIHGSKVL
TISTLRLTIIQLENNVPAPFLHPNWASHRNNWIKAVQMCSKAREFALALAILECAIKPVV
MLPVWKDSLGHTRLHRMTSIEREEKEKVKKREKKLEDEETMQQATWVKYTIPIKHQVWKQ
KGEEYRVTGYGGWSWISKTHVHRFVPKLPGNTNVNYRLALEAAKPTKGNAASGPNKRKVL
PKAVINSETHEKKVFTPVTEEKEQEQPFTMESSGEGRAMKEEEDEENMITEKVEVEEKTE
DKMDVDPSVTETCLTEEKGKKDSIGSSSATDSGVKEEYREGDKPKQEDSKAHLRPFNWDV
VNVSEGFQLRTAYKRKVKTSKLDGLLERRVKQFTLEEKQRLERLKQQSALAKHTVSKERI
HTGTSAAVRTDAYTANRKLEELAATPSLSLKAEGQAEPVVKDSVVKRLSFDQEQQVKSKT
SGETDNLDVRLGSVCNPPAAGASGLTLGVQGNGSSQMELNGTSQKSIELSGKANSTSKEP
PSDVANPPKADMTTAGENGKMQGYKQLEQDSGQRDNEILEVIQSKANPAQVNGKEVVDNK
APVQTKMHLDSRVENKTLLKTLDDEIKALPVKEPVKSLMNGTIPQDGLKVSSSVLATNTA
MADVEKVVVSELDYRPPQKVARLENNGKILADSTVTSSLLGPTPGVVTVCNSNTSEPVDI
GPTAPNNINPPPVPSAEGSSSSNDTTENHSSGSVKTVSQTTTTTTVSTESRTVQIAHVSS
SSKPSESRAVSTLTTMTKTTTTTRVSCPALGAAVSQETKTVVTATVTDAKSGPSGTLVSS
MTVSKEYSTRDRVRLLKFSRSKKTRSGTALPSYRKFVTKSSKKSIFVLPNDDLKKLARRG
GIREVPVFNYNAKPAMDIWPYPSPRPTFGITWRYRLQTVKSLAGVSLMLRLLWACLRWDD
MAVKPSPAVATTRTESSETEITTTEIIKRRDVGPYGIRSEYCIRKIICPIGVTEAPKETP
TPQRKGLRSSALRPKKPEPAKQTGPVVIETWVAEEELEIWEIRAFSERVEREKAQAADQV
KVSRTLKTAEEVKAQLEAQLKQQRLAAQQKRLEQQKPSAAATSTTTAAISTPTSTLSTSA
FGTPASQSSQVTPGTKLVVATKLGKPVTFQQNKNFHQSFASWVKQGQGSPASTGSVATVT
NSMVTSSGQTFQIATSPVSMAGQVITAKLPIPANSKIVTVNMPTTQGGMVQVQQNVLGII
PSSTPGNQRTYSSFQNRTATINIRPSTSTSTTAQQVITTGAQIRPGMTVIRTPLQQGTPM
GKTIIRTPLMVQQGTLPASQVIRGQPVSTAVSGPSPVQSNAGQRLLGTAPSPRTGTPAPG
QTPAPPTPQGARPQQGQVKLTLAQLTQLTQGAQGGNQGLTVVIQGQGQTTGQLQVIPPGV
TVIPNPGQQLMQAAMPNGQMQRFLFTPGAPAPAPASASVTPVTATATTPSVPALSQLQVQ
TPAPQAQASVQPPLKAVTPVQPPALTSAPPPVSTSQTQLPQTQLPQTQLPQTQLPQTQLP
QTQLPQTQLPQTQLPQTQLPQTQLPQTQLPQTQLPQTQLPQTQLPQTQLPQTQLPQTQLP
QTQLPQTQLPQTQLPQTQLPQTQLPQTQLPQTQLPQTQLPQTQLPQTQLPQTQLPQTQLP
QTQLPQTQVHIPLQSPPTLPMQHLAQIPTSPQQVHMKSLSISTTVSKATVRPIQAQAQIR
PQQLQLHPQPQLITVPGLQQQVQVLGTIQSHVAAQLQAQQGGVVPQQIKLQLPIQIQQAG
GQVQAHQIQNVVTIQTASVQEQLHRIQQLREQQQLKKKQQEAKKEQSLQASSPADIIQKQ
VAMKQNAVIEHLKQRRTMTPTEREENQRMIVCNQVMKFILDKIDKDEKQAAKKRKKEESV
EQKRSKQNASKLSALLFKHKEQLKAEILKKRALLDKELQLEVQEELRRDISRLRKEKEKA
QAAASQAAAAAAQAASSISPTVALPSSAYKRKRDEERDLSSAKPKKKKMISTTSKDHKKE
VKLYCVCKTPYDESKFYIGCDLCSNWFHGACVGITEKEAKKMDDYVCNGCKRGQDSQDSE
GATEELYCICRTPYDEAQFYIGCDRCQNWYHGRCVGILQSEATHIDEYMCPQCQSTEDAM
TVLTPLTDKDYEGLRRILRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEDRLQ
KRYYNKLTEFVADMTKIFDNCRYYNPSDSPFFQCAEVLESFFVQKLKGFKASRSHNNKLQ
SSAS
NT seq
9195 nt
NT seq
+upstream
nt +downstream
nt
atgagggggagaagaggcaggccgcccaaaaccctgctgatgcaggagccatcctccggc
tcggagcgtggcttgagacccaggagggggttgagggcaaagggtagaggtagtgctgaa
gtcgattccgagagtcccaagaggggaaacaatccttcaacaaggggcaagaggaaagtg
ggatctacggtatctcgcggtaggggaagaggcaggggtggtggtggcggcagaggaagg
ggcagacggtcaatcgctaggtctgtggtttatgatgatcatgaaagtgatgaagatgat
gatgctgtgagtttaagatctgaggaggacgagctcatagaggaagagccgataacggac
gaggaagaagaggccctcaatgaggagtcagacccgcttgaggaaatactagaggatgat
gatgatgccagctactgtactgagagcagctttcggagtcagagcactcatggcagtact
cctgggcgcagaaggacgcgggtacaccgcccacgctcacccatctttgaggaaaaagag
atccctcctcttgtgctgcctagatcctcggaggacctcatggttcccagtgaggagctg
cttaacgtctcctccatctacgaggtgctgcggaacttcagcgcagtgctgcgcctttca
cccttccgcttcgaggacttctgtgctgccctggtgagccaagagcagtgcacgctgatg
gcggagacccacacagctctgatgaaagccatcctgcgcgaggaggatacctccaacacc
acatttggccctgccgaccttaaggacagcgtcaactccaccctctacttcatcgacggc
atgacgtggcccgaggtggtgcgtgcctactgcgagagcgatcaggagtaccatcacgtc
ctgccctaccaggagatcgaggactacccctacggcccactggacagtaagatcaaggta
ttgcagttcctggtcgaccagttcctcaccacgaacatcgcacgcgaggagctgatgtcg
gagggcgtggtgcagtatgatgaccactgcagggtgtgccacaggttaggggatctgctt
tgttgtgagacctgctctgctgtctaccacctcgagtgcgtaaagccgccgctggaggag
gtgccggaggatgagtggcagtgtgagatctgtgcggcgcacaaggtgcccggcgtggtt
gactgtttgacggagatgcagaagaacaaaccctatatccgccaggaacccattggctac
gatcgccaccggaggaaatactggttcctgaaccggcggatagttgttgaggaggacggg
gagcaggacaagaaaaacatctggtactacagcacaaaggtccagctggtggaactgatt
gactgtctggacaaggagtactgggagaacgatctctgtgctgtccttgaggagatgagg
gaggaggtgcacgctcacatggacatcaccgaggacctcaccaacaaggcccgtggcaac
aacaagaccttcctcacagcagctaacgaggagatcctggaacgtgtgcagtccaagcag
gagcgtccgacgggggagcaggcaggagtggcagagcaggcaggagctgacgacagctca
aatacgaactccaccaagactgaccgtgagacccccccagagtcctctgcacgaccagac
cacggagcgcttaaagactcacagtccaaagaggagcccagctcacaagctagagctcct
gctgctggaaaagatagcaccaccatccatcctgagccccctgtgtctggctcatctacc
caggaccacactctccctaaacctgaatcccctaagcctgctgaggtgtctcgctcggcc
ccctctgggagcggggagagtggggaggtgcccatggagcctgagcaacagaggccagat
aataagccagtagactcagagtcccgcggagaccctccacccccggtccaccctccaaca
catactgcagcggagaacagcaacagcagccacacctcagtgcccgggggcctccggggg
ccggcggagcccaacgctgtcgacgggtcgtctcaggtctccatcagcagccaggaagac
actggtgaagacaatgagacattgaatgatgagctgtcgggacggggtaacaatcgcatg
gtgactcgtctgcgtaacccggacagcaagctaaacctgctgaagaccaatggagacggg
agcccagcacccaaggacagcgtggagacatctcttcccagctctgagagcgaagcgtcc
cgtttgggcgctgtgaggaaagaattggtggggaagggcaacctgaacggtttcttcaag
ctaggacaggagggcaagtatcgtgtctaccagaaccagtacagcaccaacccactgggc
ctcaacaagcaccaacatcgcgaggaccacgacaagcgccgccacctctcccacaaattc
agcctgactcccgccggggaattcaagtggaacgggtccatccacggctccaaggtgctg
accatctccaccctgcggctgaccatcatccagctggagaacaacgtccctgcccccttc
ctgcaccccaactgggcctcgcacaggaacaactggataaaggcggtgcaaatgtgcagt
aaggctcgggagtttgccttggcgctggctatcctggagtgtgcgatcaaacctgtggta
atgctcccggtctggaaagactcacttggacacacccggctccatcgcatgacttccatt
gagagggaggagaaggagaaggtgaaaaagagagaaaagaaactggaggatgaggagaca
atgcagcaggccacctgggtgaagtacaccatccccatcaaacaccaggtatggaagcag
aagggggaggagtatagggtgacagggtacgggggctggagctggatcagtaagactcat
gtccatcgcttcgtccctaagctaccagggaacaccaatgttaattaccgtctagcactt
gaggccgctaaacctaccaaaggaaatgcggcgtccggccctaacaaacgaaaagtgctg
cctaaagcagtgataaactcggaaacccatgaaaagaaagtgtttactccggttactgaa
gaaaaagaacaggagcaacccttcactatggagtcatctggagaaggccgggcaatgaaa
gaggaggaggatgaggagaacatgatcacagagaaggtggaggtggaggagaagactgag
gacaagatggatgttgacccttctgtaacagaaacttgtctcaccgaggaaaaaggtaaa
aaggacagcataggttcctcatcagctactgactccggtgtgaaggaggagtacagggaa
ggagacaaacccaagcaggaggactccaaggcccatcttcgcccattcaactgggatgtt
gtcaacgtcagcgagggcttccagctccgcacggcctacaagaggaaggtgaagacgtcc
aagctggatgggcttttggagcgcagagtgaagcagttcaccctggaggagaagcagagg
cttgagcggcttaaacagcagtcagccctggccaaacacaccgtctccaaagagagaatc
catacagggacttctgctgctgtcagaactgacgcttatacggcaaacagaaagctagag
gagttagcagcgacaccttcccttagtctgaaagctgaggggcaggcagagccagtagtt
aaagactctgtagttaaaaggctgagctttgaccaggagcagcaagtaaaatccaaaacc
tcaggagagactgataacctggatgtcagattaggttctgtgtgtaatccaccagcagca
ggagcctccggtcttacactcggtgttcagggaaatggttcatcacaaatggagctgaat
gggacctcccagaagagcatagagcttagtggtaaagccaattccacatctaaagaaccg
ccttcagatgtggccaaccctcccaaggcagacatgacaacagcgggagagaacggtaaa
atgcagggttacaagcagttagagcaggacagtggacagagggataatgaaatcctggag
gttattcaaagcaaagccaatccagcgcaggtgaacgggaaagaagtggttgacaacaag
gctcctgtgcaaacaaagatgcacttagacagcagagtggaaaacaagaccctgctaaag
acattagacgacgagatcaaagcactgccagtgaaggagcctgtaaagtctcttatgaat
ggtaccatcccgcaggacgggttaaaggtcagcagctctgtgttagccaccaacacagcc
atggcagatgtagaaaaggttgtggtgtccgagcttgactaccggcctcctcagaaggtt
gccagattggaaaataatggcaaaatactggccgactccacagtcacttcgtcacttttg
ggtccgacccctggtgtggtcactgtgtgcaacagcaacacatctgagccagtggatatt
gggccaacagcaccaaataacatcaacccaccccctgtcccctctgcagagggctccagc
tcgagtaacgacaccacagagaaccacagtagtgggtccgtgaagactgtttcccagacc
accaccaccaccaccgtgtccacagagtcccgcacagtgcagatcgcccacgtctccagc
agcagcaagccctcggagagccgagctgtgtccaccctcaccaccatgaccaagaccacc
accaccacccgggtcagctgcccagccctcggggctgccgtctcccaggagaccaagacc
gttgtcacggcaacagtgaccgacgccaagtctggcccttccggcactttggtctcatcc
atgacagtcagtaaggagtactccaccagagaccgtgtccggttgcttaagttctcacgc
tccaagaagacgcgctcgggcactgcgctgccctcctaccgcaagtttgtcaccaagagt
agcaagaaaagcatcttcgtgctgcccaacgatgacctgaagaagctggcaaggagaggg
gggattagagaggtgccagtcttcaactataatgccaagccagccatggacatctggccc
tacccttcacccagaccgacctttggaatcacatggagataccgtctccagacggtcaag
tccctggctggggttagtctgatgctgcggctgctttgggcctgtctgaggtgggacgac
atggccgttaagccctcccctgcagtagcaaccacccgcactgaatcctcggaaaccgag
atcaccacaacggagataatcaagcggcgggacgtgggaccgtacggcatccgctctgaa
tactgcatcaggaagatcatctgccctatcggtgttacagaggctcccaaagagacaccc
actccccagaggaaaggcctgcggtccagcgctctgaggccaaagaagcctgagccggcc
aagcagactgggcccgtcgtcatagagacgtgggtggcggaggaggagctggagatttgg
gagatcagagcattttctgaaagggtagagagggagaaggcccaggctgcagaccaggtt
aaggttagtagaacactgaagactgcagaggaggtcaaggcgcagttggaggctcagcta
aagcagcagagattggctgctcagcagaaacggttggagcaacagaagcctagtgcggcc
gccacctccacaaccaccgctgccatctccaccccaaccagcaccctttctacctcagcg
tttggtaccccagcgtctcagagcagccaggtcaccccagggactaaactggtcgtggcc
accaagctggggaaacctgtcacattccagcagaacaagaacttccatcaatcttttgct
tcctgggtcaagcagggccagggcagtccagcctccaccggctcggttgccacggtgacc
aacagcatggtcacctcttctgggcaaacgttccagatcgctaccagcccagtgtccatg
gctggccaggtcatcaccgccaagctacccatcccagccaacagcaagattgtcacggtc
aacatgccaaccacacaaggaggtatggtgcaagttcagcaaaatgtcctgggtattatt
ccatccagcaccccaggtaaccagcggacctactcatcattccagaaccgcaccgccacc
atcaacatccgacccagtacgtccacatccaccaccgctcagcaggtcatcaccactgga
gcccagatccgtccgggcatgacggtgatccgcacaccccttcagcagggtacccccatg
ggcaaaaccatcatcagaacccccttgatggtgcaacaaggtactcttccagccagccag
gtcatccgaggccagcctgtctccacagcagtgtccggtcccagccctgtgcagagcaac
gcaggccagcggttgctgggtacagccccttcccctcgcactggcacccctgccccaggg
cagaccccagcaccccccaccccccagggagcccggccccagcagggccaggttaaactc
accttggcccaactcacccagctaactcaaggggcacagggagggaaccagggtctcacg
gtggtgatccaggggcagggccagaccacaggccagctgcaggtcatccctccgggggtg
acggtcatcccaaaccctgggcagcagttaatgcaggccgctatgcccaacggccaaatg
cagcgcttcctgttcacccccggggcacctgcaccggccccagctagtgcttctgtcaca
cctgtcacagccactgccaccacaccttcagtgccagctctgtctcagcttcaggttcag
acgcctgcacctcaagcacaggcatcagtccagcctcctctaaaagctgtcactccggtc
cagccccctgctctcacttctgcgcctcctccagtctccacaagtcagacgcagctccct
cagacgcagctccctcagacgcagctccctcagacgcagctcccccagacgcagctcccc
cagacgcagctccctcagacgcagctcccccagacgcagctcccccagacgcagctcccc
cagacgcagctcccccagacgcagctcccccagacgcagctcccccagacgcagctcccc
cagacgcagctcccccagacgcagctcccccagacgcagctcccccagacgcagctcccc
cagacgcagctcccccagacgcagctcccccagacgcagctcccccagacgcagctcccc
cagacgcagctcccccagacgcagctcccccagacgcagctcccccagacgcagctcccc
cagacgcagctcccccagacgcagctgccccagacgcagctgccccagacgcagctgccc
cagacgcagctgccccagacgcaagtccacatccccctccagtcccccccaaccttacct
atgcagcacctggcccagatcccaacttctccacagcaggtccatatgaagtctctctcc
atctccaccaccgtctccaaagccactgtgaggcccatccaggcccaggctcagataagg
cctcagcagctgcagctccacccgcagccccagctgatcacagtgccggggcttcagcag
caggtccaggtgctgggcaccatccagtcccatgtggcggcccagctccaggcccagcag
ggcggggtggtgccccagcagatcaagctgcagctgcccatccagatccagcaggcaggg
ggtcaggtgcaggcccaccagatccagaatgtggtgaccatccagacagccagcgtgcag
gagcaactgcataggatccagcagctcagagagcagcagcagctgaaaaagaagcagcag
gaggcaaagaaagagcagagcctgcaggcctccagccccgcagacatcatccagaaacag
gtggcgatgaagcagaatgccgtgatagaacatctgaaacagaggagaaccatgacgccg
acagagcgggaagaaaaccagaggatgatcgtctgcaaccaagtgatgaagttcatcctg
gacaagattgataaagacgagaagcaggcggctaaaaagagaaagaaggaagagtccgtg
gaacagaaacgcagcaagcagaacgcctccaagctctccgcgctgctcttcaagcacaaa
gagcagctcaaggctgagatcctgaagaagagggctctactggacaaggagctgcagcta
gaagttcaggaggagctgaggagggacattagccggctgaggaaggagaaggagaaggcc
caagcagcagcctctcaggcggcggcagccgcagcccaggcagcttcgtccatctccccc
accgtggccttgccttcctctgcctacaaacgcaagagggacgaagagagagacttgtct
tccgccaagcccaagaagaagaaaatgatctctactacctcaaaggatcacaaaaaggaa
gtcaagctctactgtgtctgcaaaacgccctacgacgagtccaagttctacattgggtgt
gacttgtgttccaactggttccacggtgcatgtgtgggcatcacagagaaggaggccaag
aagatggacgactatgtctgcaacggctgcaagcggggccaggactcgcaggattcggag
ggcgccacggaggagctgtactgcatctgccggacgccatacgatgaagcgcagttttac
attggctgcgaccgctgccagaactggtatcacgggcgctgtgtgggcatcctgcagagc
gaggccacccacatagatgagtacatgtgcccacagtgccagtccacagaggacgccatg
acggtcctcacgccgctcactgacaaggactacgagggcttaagaagaatcctgcgctcc
ttacaggctcacaaaatggcgtggccgtttctggaaccggtagatcccaatgatgctcct
gattattatggggttattaaggaaccaatggacctcgccacaatggaagaccgattacag
aaacgctattacaataagctcacagagttcgtggcagatatgaccaaaatatttgacaac
tgccgctactacaatcccagcgattcgcccttctttcagtgtgcagaagttctggaatca
ttctttgtacagaagctcaaaggtttcaaagctagcaggtctcataacaacaaactacag
tcttcggcctcttag
DBGET
integrated database retrieval system
