Esox lucius (northern pike): 105013814
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Entry
105013814 CDS
T04894
Symbol
lrif1
Name
(RefSeq) ligand-dependent nuclear receptor-interacting factor 1 isoform X1
KO
K23220
ligand-dependent nuclear receptor-interacting factor 1
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
els03036
]
105013814 (lrif1)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105013814 (lrif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRIF1
Motif
Other DBs
NCBI-GeneID:
105013814
NCBI-ProteinID:
XP_010873909
UniProt:
A0A3P8XPS9
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Position
LG12:21569041..21585452
Genome browser
AA seq
1050 aa
AA seq
DB search
MSNLKQVSYNNQGKTTASQGAGLSGTGVFYQAMPAVGTDGRNVMKLIPVQKVNGQFVRLP
TNTIKGTEHQGDLTLNLSSMSKGNTPTSGSTARGQFRNKSPTPQILSTSPKPPSLTTGIY
PSVRIHTPIVTSKLTQQTGPLTSPELTCKKTLGVTLKKQLPVTVKSPVLPNGQYLQIPPN
AQVKTLPASALPPAIKRQIFTSSMTCVSKSPMVLYVSPVQTMKQGGTPLCSTSQKAVLSL
SRIQGSSGQTVSTCSTQCSTTSKDSRPPVTPIKWVIEEADGSPAPCLVPVKSTSVTSEIL
KTLAKMENAQKTGENPPKMSLSTQESETKIGQAKDNALVMYNGKVYFVAKKTPELCNRPS
EPLEGSRNVGDSSTHTTESLGFNQKILPPSIPPTSSFGSQLSSATRRDPNHIVIPDDIID
LCDDDPQDDLTCQAVSTKDVTEQSFTRSEVDEDEDSNVIFVSYLPPKKVSKVGEDKVVTH
MLDDLETEQEVFQCNLNNLVEDSQNKVSVVSAERCRSVGKAQEIAGCQRTAAVQELISHQ
QNIIATGLKNIKGDATSLERGSSQPSGSNQEMVNVQSDATDQGIRNNSAATQENIPGNTS
LQLEMEALKEKSSSDFIHEQRRSMLNQDSLKTCDRLLKQMFGIKSDVKICLERVDAKPLA
IPKVFPWIGTTNKRTIEAIRKLLQGSKIVVKKREHKETELHATKNNDSFVKDAKIQKIEK
VEKASENLGKSLNCPQLDMQLHSSPTPQLDMQILISPTPQLDLDVLTNPTPQQDMDVLTN
PAPQQEMDVLTNPTPQQDMDVLINPTPQQDMDVLTNPTPQQDMDVLTNPAPQLERQHLTS
MSPQLDMLSDAEQIFGYEEPTVSELISNTIKEVSSKPLTDHHPVHISKRSSNTPVPSIHT
ETNIEAMDSLPGLCCSTANNIKTNSRRRGKGRRCTACPCGVIGTLVPEKAMCSLSTSHED
PGSFKPVKQKGRKSIKFQIEDKESPSVEVQFPSTVTKHGSSTAGEIPMNYFCSAAPMDPE
EIKRYEKIKRLKELLKEKEAALAMIRKNMG
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacttgaagcaggtgtcatacaataatcaaggtaaaacaacggcatctcaaggc
gctggtctcagtgggacaggtgtcttttaccaagccatgccagctgtgggaactgatggg
agaaatgttatgaaactgatccctgtccaaaaagtgaatgggcagtttgttcgattacca
acaaataccataaagggcactgaacatcaaggagatttgaccttaaatctgtcatcaatg
tcaaagggtaatacacctacttcggggtccacagctagaggacaatttaggaataaatcg
ccaactcctcaaatccttagtacctccccaaaacctcccagtctgacaaccggaatatat
ccttctgtgcgcatccacactcctatagtaacatcaaagttaacccaacaaacaggaccc
ttgacgtcacctgagctgacctgcaagaagacattaggcgtaacacttaaaaaacagctg
ccagtcactgtgaaatccccagtgcttccaaatggacagtatcttcaaattccccctaat
gctcaagtcaaaaccctcccagcatctgcactccccccagctataaaaagacagatattt
acttcatcaatgacctgtgtctcaaaatcaccaatggttctttatgtgtcccctgtccaa
accatgaaacaaggtggtactccactgtgttcaacatcacagaaggcagtcctctccctc
agccgtatccaagggtcatctggccagacggtttctacatgctcaacacagtgttcaacg
acttccaaggatagcagaccaccagtcactcctattaagtgggtgattgaggaggcggat
ggctcacctgctccatgccttgttcctgtgaaatccacttcagtgacctcagaaattctg
aaaactctggcaaaaatggaaaacgcccaaaaaactggtgaaaacccaccaaaaatgtct
ttgtctacccaagagagtgagacaaaaattggccaagcgaaggacaatgccttggtgatg
tacaatgggaaggtgtattttgtggccaaaaaaactcctgagctttgtaaccgaccctca
gaacctttggagggcagtagaaatgtgggtgattcctccacacatacaactgaaagtctt
ggattcaaccagaaaatcttaccaccctccataccaccaacctcctcatttggatcacaa
ttgtctagtgcaaccagacgagacccaaatcacattgtcataccagatgacataattgac
ttatgtgacgatgacccccaggatgatctcacatgccaggcagtatcaacaaaggacgta
acagagcaatcttttacacggtctgaagttgatgaggatgaagactccaatgtaatattt
gtatcataccttccacccaaaaaagtctctaaagtaggggaggacaaagtagtgactcat
atgctagatgacttagaaaccgaacaagaagtgttccaatgtaatttgaataacctggta
gaggacagtcagaacaaagtatccgttgtttcagcagaaaggtgtcggagcgttggcaag
gcacaagaaattgcaggctgtcaaaggactgcagcagttcaagaattaatctcccatcag
caaaacataattgctacaggactaaagaatattaaaggtgatgccaccagcttggaaagg
ggaagcagtcagcccagtggctctaaccaagaaatggtgaatgtccagagtgatgccact
gaccagggaattcgaaacaacagtgctgccacacaagaaaatattcctggaaatacctct
cttcagctagaaatggaggcactcaaagaaaaaagctcatcagacttcatccacgagcag
cgaagatccatgttgaaccaggactccctgaaaacctgtgatcgcctgctgaaacagatg
tttgggatcaaatccgatgtgaaaatatgtttggagagggttgatgctaaacctttggct
atccccaaggtgtttccttggattggaacaacaaacaaacgtaccatagaggctattcgc
aaactgttacagggatccaaaatcgtggtaaaaaaaagggaacataaggaaacagagctt
catgcaactaagaacaatgatagttttgtaaaagatgctaaaatacagaaaatagaaaaa
gttgaaaaagcatctgaaaatttaggaaagtcccttaattgtcctcagttggacatgcag
ctccactctagtccaactcctcagctggacatgcagatcctcatcagtccaactcctcag
ctagacctggatgtcctaaccaatccaactcctcagcaagacatggatgtcctaaccaat
ccagctcctcagcaagaaatggatgtcctaaccaacccaactcctcagcaagacatggat
gtcctaatcaatccaactcctcagcaagacatggatgtcctaaccaatccaactccacag
caagacatggatgtcctaactaatccagctccacagctggagaggcagcacctcaccagt
atgagtccccagttggacatgttatctgatgctgaacagatatttggctatgaggaacca
acggtcagtgaattaatttccaacacaatcaaagaggtctcttccaaacctctaacagat
caccatccagttcatatttcaaaaagaagctcaaacacaccggttccatctatccacaca
gaaacaaacattgaagctatggattctctgcctgggctctgctgtagcacagcaaataat
attaagacaaactctagaagaaggggaaaagggagaagatgcacagcgtgtccatgtggg
gtgattggaacactagtgccagaaaaagcaatgtgctcattatccacttcacatgaggat
cctggttcatttaaaccagtgaaacaaaagggtaggaagtccataaagtttcaaatagaa
gataaagagtcaccatctgtggaagtgcagtttccttcaactgttactaagcatggaagt
agtacagctggagagatcccaatgaattacttctgctctgcagcacccatggaccctgaa
gaaatcaagcgatatgagaaaatcaaacgactgaaagagctcttgaaggagaaggaggct
gctctcgccatgattaggaagaacatgggctaa
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