Esox lucius (northern pike): 105016699
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Entry
105016699 CDS
T04894
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
els
Esox lucius (northern pike)
Pathway
els03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105016699 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105016699 (smarcd1)
03036 Chromosome and associated proteins [BR:
els03036
]
105016699 (smarcd1)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105016699 (smarcd1)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105016699 (smarcd1)
PBAF complex
105016699 (smarcd1)
GBAF(ncBAF) complex
105016699 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
105016699
NCBI-ProteinID:
XP_010879016
LinkDB
All DBs
Position
LG17:5416075..5430959
Genome browser
AA seq
515 aa
AA seq
DB search
MAARGSFQSAPTGGSGGGGMGPGPPVQGGGPGMGPGTPGGRMGPSSGAQNHLYRSPMPGP
GYPRPGGMPPSSRMTPQGPSMGPPGYGSSPVARPGMPGVMDPSRKRPAPQQIQQVQQQRN
QHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPR
LARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVANPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggctagaggtagttttcaatcagctccaactggaggtagtggcggcggaggaatg
ggacctggacctccggtgcaaggtggaggcccaggcatgggacctgggactcccggagga
aggatgggaccctcatcaggcgcacagaaccacctctatcgctccccgatgcctgggcct
ggatacccgagacccggtgggatgcccccatccagccgtatgaccccccaaggtccgtcc
atggggcccccaggctatggctccagccccgtggctcgtcccgggatgcctggtgtcatg
gatccctcccgcaagaggcccgcccctcagcagatccagcaggtccagcagcagcgtaac
cagcatactaagaaaaagaagatggcggataagattctacctcagcgaatcagagagctg
gtgccagagtctcaggcctacatggatctgctggccttcgagcggaagctggaccaaacc
atcatgaggaaacgtctagacatccaagaggccctcaagagacccatcaagcaaaagcga
aagcttcgcatcttcatatccaacaccttcaaccccgccaagcctgatgcagaggatgga
gaaggcactgttgcatcttgggagctccgtgttgaagggcgcctgcttgaagacactgct
gtttccaagtacgaagccaccaagcagaagagaaagttctcgtccttcttcaaatctctg
gtcatcgagctggacaaagatctgtacggtccggacaatcacttggttgagtggcacagg
accgcgaccactcaggagactgatggcttccaggtgaagcgaccgggcgatgtgggcgtc
cgttgcactgtcctgctcatgctggactaccagccccctcagtttaagctggaccctcgc
ctggctcggatgttggggatccacacccagaccaggccggtcatcatccaggccctgtgg
cagtatgtcaagacccacaagctccaggacccccacgagagagagttcatcaactgtgac
aagtatcttcagcagatctttgagacccagcggatgaagttctctgagatcccccagcgt
ctccatgctctcctgatgcctccagaacccatcatcatcaaccatgtcatcagtgtggac
cccaacgaccagaagaagacggcctgctacgacattgatgtggaggtggacgacaccctg
aagacccaaatgaactccttcctcctgtccactgccagccagcaggagatcgctggcctg
gacaacaagattcatgagactattgaaaccatcaaccagctaaagacccagagagagttc
atgctcagctttgccagagacccacaaggattcatcaacgactggcttcagtctcagtgc
agggacctcaagactatgaccgatgtggtcgctaacccagaagaggagaggagagccgag
ttctatttccaaccgtgggcccaggaagctgtgtgccgttacttctactccaaggtgcag
cagaggagacaggagctggaacaggccctgggaatccgaaacacctag
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