Esox lucius (northern pike): 105018044
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Entry
105018044 CDS
T04894
Symbol
hmbox1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105018044 (hmbox1)
Transcription factors [BR:
els03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
105018044 (hmbox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_37
HTH_31
Motif
Other DBs
NCBI-GeneID:
105018044
NCBI-ProteinID:
XP_028970389
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All DBs
Position
LG18:complement(2857789..2870247)
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AA seq
526 aa
AA seq
DB search
MLSPSLSLFARLSLHLVTRFSPFRMSHYTDEPRFTIEQIDLLQRLRRTGMTKQEILHAMD
TLDRLDREHGDKFGRRTSYGGGSSGPVSDPNSAATNTSTSNNGASGAASTSSNATSSGIS
TAVGNSNPPGDVINSTPASSSTSSIATQTQFLPARAGLSPSPSNSYDTSPPPGPPPPSAL
LPSPVSLVAMVQNGGRDSLAATPNGKLSPPRYPMNSAAAARAFGFEATEDELDIDDKVEE
LMRRDSSIVKEEIKSFLGNRRISQAVVAQVTGISQSRISHWLLQHGSDLSEQKKRAFYRW
YQLEKTSPGATLNMRPAPMALEEMEWRQTPPPISTAPGSFRLRRGSRFTWRKECLAVMES
YFNDNQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIE
ATILESHGIDVQSPGGHSNSDDIDGVDYAEQACDLPYFDKRPMPRPFNFYRLEPTSPTQD
DVTSHSDHQDPISLAVEMAAVNHTILALSRTGAGPSDIKTEALDDD
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgctatctccctccctttctctctttgcccgtctgtctctccatctcgtcacccgcttc
tcccccttcaggatgtctcactacacagatgagcctcgcttcaccatcgagcagatcgac
ctgctccagcggctgcgccgtacgggcatgaccaagcaggagatcctccacgccatggac
accctcgaccggctggaccgtgagcacggggacaagttcggccgtcgcacctcctacggc
ggaggcagcagtggccccgtgtcggaccccaacagcgccgccacaaacacctccacctcc
aacaatggtgcctccggcgccgcttccacctcctccaacgcgacgtcctcgggtatcagt
accgctgtcggtaacagtaacccccctggtgatgtcatcaactccacccccgcctcctcc
tcaacctcctccatcgccacgcagacccagttcctgcccgcacgcgcagggctctccccg
tcccctagcaacagctatgacacctctccgccgcccggcccacccccgccctccgccctc
ctcccgtccccagtgtcgttggtcgccatggtgcagaacgggggccgggacagcctggca
gcaacacccaatgggaagttgtcgccgccacggtacccgatgaacagcgctgcggctgca
agggcattcgggtttgaagccacggaggacgagctggacatcgatgacaaggtggaggag
ctgatgaggagggatagcagtatcgtgaaggaggagatcaagtctttcctggggaacaga
agaatctctcaggctgtggtggcacaggtcacaggtatcagtcaaagcaggatctctcat
tggctgcttcaacacggctctgacctcagcgaacagaagaagcgggcgttctaccgctgg
taccagctagagaagaccagcccaggtgccactctaaacatgcgccccgcccccatggct
ctggaggagatggagtggcgacagaccccgccccctataagcaccgcccccgggagcttc
aggctgcggcgcggcagccgattcacctggaggaaagaatgtctggctgtaatggagagc
tacttcaatgacaaccagtacccagatgaagccaaacgggaggagatcgccaacgcctgc
aacgccgtcatccagaaacccgggaagaagttgtctgacctggagagagtcacctccctc
aaagtctacaactggtttgccaaccgacggaaggagatcaaaagacgggctaatattgaa
gccacaatcctggagagccacggcattgacgtccagagtcctggcggacactccaacagc
gacgacatcgatggggtggactacgccgaacaggcctgtgacctgccctacttcgacaag
agacccatgccccgacctttcaacttctaccggctggagcccacttcccccacacaggac
gacgtcaccagccacagtgaccaccaggaccccatctcccttgccgtagagatggctgca
gtcaaccacaccatcctggccctgtcgcgaaccggggcgggtcccagtgacatcaagaca
gaggccctggacgatgactaa
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