Esox lucius (northern pike): 105018834
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Entry
105018834 CDS
T04894
Name
(RefSeq) retinoic acid receptor RXR-beta-A
KO
K08524
retinoid X receptor alpha
Organism
els
Esox lucius (northern pike)
Pathway
els03320
PPAR signaling pathway
els04148
Efferocytosis
els04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105018834
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
105018834
03320 PPAR signaling pathway
105018834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105018834
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
els03310
]
105018834
Transcription factors [BR:
els03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
105018834
Nuclear receptors [BR:
els03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
105018834
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
105018834
NCBI-ProteinID:
XP_010882880
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Position
LG20:complement(13603506..13617856)
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AA seq
436 aa
AA seq
DB search
MAMSSHQPTSSASNSPTSTFGSPFSVISPSLGSPGVAPSMGYGPISSNQINSSMSVSGMH
SISSSDDVKPPFGLRPMSAHSPGIMLSQKRMCAICGDRSSGKHYGVYSCEGCKGFFKRTV
RKDLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQKSVQEERQRNRER
EEGLECSSAVNEEMPVEKILEAETSVEQRAELHSDAGSAGSSPHDAVTNICQTADKQLFA
LVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGVLLASELHRDNMHSA
GVAAIFDRESVQSAEVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDAKGLSNT
GEVELLREKVYASLESYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTP
IDTFLMEMLEAPHQLA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtcctcacatcagcccaccagttcagcctccaacagtcccaccagcaccttt
ggttctcctttttcagtcatcagcccctcactgggttcccccggtgtggctccctccatg
ggctatggacctattagtagtaaccagatcaactcttcaatgtcagtttcggggatgcac
tcgatcagcagctcagacgatgtcaaacccccatttggcttgaggcctatgtctgcacat
agccctgggataatgctctctcagaaacgcatgtgtgccatctgtggagaccgctcctct
ggcaagcactacggcgtgtacagctgtgaaggttgcaagggttttttcaaacgcacggtg
cgcaaggacctgagctacacctgccgggacaacaaggagtgtctggtggacaagcgccag
cgcaaccgctgccagtactgccgctaccagaaatgcctggctatgggcatgaagagggaa
gtggtccaagatgaacgtcagaaatcagtccaggaggagcgtcagaggaaccgggagcga
gaggagggactagagtgtagcagtgctgtgaacgaggagatgcccgtggagaagatcttg
gaggccgagacgtccgtggagcagagagctgagcttcactcggatgctggttctgcgggc
agctctcctcatgatgctgtgacaaacatctgccagactgcggacaagcagctgtttgca
ctggtcgagtgggcaaaaaggatcccccatttctctgagctgcccctggatgaccaggtc
atccttctgcgtgcagggtggaacgagcttctcatcgcctccttctcccaccgctccatt
gctgtgaaggacggtgtcctgctagcctctgagctgcatcgagacaacatgcacagtgca
ggggtggcggccatctttgaccgggagagtgtgcagagtgctgaggtgggagcaattttc
gacagggttctcactgagctggtcagcaagatgagggacatgcaaatggacaagaccgag
ctgggctgcctccgagccatcgtcctcttcaacccagatgcgaaaggtctgtccaacacc
ggggaggtggagctgctgagggagaaggtctacgcctcactggaatcctactgcaagcag
aagtaccccgagcagcagggaaggtttgctaagctccttctccggttgccagccctgcgt
tctattggcttgaagtgtctggagcacctgttctttttcaagctcattggtgacacccct
atcgacacgttccttatggaaatgcttgaagcgcctcatcagttggcgtaa
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