Esox lucius (northern pike): 105020031
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Entry
105020031 CDS
T04894
Name
(RefSeq) collagen alpha-1(XXVIII) chain
KO
K23619
collagen type XXVIII alpha
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
els01002
]
105020031
Peptidases and inhibitors [BR:
els01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
105020031
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
105020031
NCBI-ProteinID:
XP_012995463
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Position
LG22:complement(4030940..4054372)
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AA seq
1222 aa
AA seq
DB search
MSPSLPWLLLLCGLYSLQAQEDDEDYDERTVSRKAKNKPLTTNAIPVLEDCSLELAFLVD
SSESAKDNHAQEKRFTTDVVDRLPGIQLQTGRGLSSRAALLQYSSHVIIEQTFKEWRGVA
NFKSRIAPVAYIGHGTYTTYAITNLTKMYLEESGPGSIKVAIMLTDGVSHPRNPDIFSAL
ADAKNQGVRFFMVGITPAANEATNVAQLRLLASSPPNRYLHNLQDRGIVDKVIKEITELA
DEGCPLAQKCACEKGERGPGGPAGKKGRPGDDGNPGVKGSKGESGLSGLPGRDGIEGKPG
YKGEQGDRGECGMPGIKGDRGPEGPVGTRGNRGLQGLPGPNGDVGPEGPPGKKGERGISG
PPGIQGENGIGLPGPKGDVGFQGRHGPPGSPGLGEPGLPGPQGPQGVQGEKGPPGEGFAG
PKGDRGLEGPRGPRGQPGAGIKGDKGEFGTPGFPGPIGRPGQGIQGEKGVEGPRGPPGGR
GPPGDGYPGPKGDQGLPGEIGSTGERGAGEPGAKGEPGSSGLAGFPGLPGEDGAPGQKGE
TGAAGLRGPEGTPGIGIQGEKGDQGQRGIRGLAGPPGIAGPSGSKGEPGVPGRLGMPGLP
GRGIVGPKGDLGPPGPPGALGETGYGLPGPKGDRGDPGPSGPFGPKGEGFPGPMGTPGLP
GPSGEPGPEGQGVQGPKGEVGFRGLPGLPGPPGEGIQGLPGGVGRPGPPGPTGPPGQGIQ
GPKGEAGSQGVTGPRGPPGEGFSGAKGDRGSGGERGLKGIKGDLGDPGVPGQSGRPGIKG
EMGLTREDIIKMIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIVKDFVTALVDRVT
VGRNATRIGLVLYSLEVQLVFDLARYLTKQDVKQAIRKILYMGEGTNTATAIRRATQDAF
HSARTGVSKVAIVITDGQTDKREPLKLEIAVREAHAANIEMYALGIVNSSDPTQSEFLRE
LNLIASDPDAEHMYLIDDFNTLPALESKLVSQFCEDENGALIYNRLTNGFANNGHRNGNN
WNQGNGNHGNGYATTTTTNRVDFNGGRQTGTGADTETYGQGGRIDITQPVNPGSTAVQTG
PRDGVQKGGRLSPDWATGRVDTPTINRNSSSSSKESSSSSTAGSSSSSSSSSSSGTSSSS
GSVQVVTALRPALPKEFAPLDPRCALVLDQGPCRDYNIRWYYDKQANACAQFWYGGCEGN
QNRFDTEEECQRTCVVSRDASV
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccctctctgccctggttgctgctgctctgtggactctacagtctccaggctcag
gaggacgacgaggactatgacgagaggaccgttagcaggaaagctaaaaacaagccactg
acaaccaacgccataccggtgctagaagactgcagcctggagctggcgtttctggttgac
agctctgagagtgcaaaagacaaccacgcccaggagaagaggttcaccacagatgtggtt
gaccgtctgccgggcatccagctccagacaggccggggtctcagctcacgggccgccctc
ctgcagtacagtagccacgtaatcatcgagcagaccttcaaggagtggcgcggcgtggcg
aatttcaagtcccgcattgcgccggtcgcatacatcggccacggcacctacaccacctac
gccatcaccaacctgaccaagatgtacctggaggagtcgggcccgggaagcatcaaggtg
gccataatgctaacggacggcgtgtcgcaccctagaaacccggacatcttctccgcattg
gctgacgccaagaaccagggtgtgaggttcttcatggtgggcatcacacccgcggccaac
gaggccacgaacgtggctcagctccggctgctggccagctccccgcccaatcgctacctc
cataacctgcaagacaggggcatcgtggacaaggtcatcaaggaaatcacggagctggcg
gatgaggggtgtcctctggcccagaagtgtgcgtgcgagaagggagagcgaggaccagga
ggccctgcgggcaagaagggtcgccctggcgatgatggaaacccaggtgttaaaggatcg
aagggtgaaagcgggctgagtggacttcctgggcgagatgggatagagggaaagcctgga
tacaaaggagagcagggggacagaggagaatgtggcatgcctggaattaaaggagacagg
ggcccggaggggcccgttggcaccaggggaaaccgagggctgcaggggttacccggtcca
aacggggacgtcggcccggagggtccccctgggaagaaaggtgagcggggaatttctgga
ccacctggaatccaaggggaaaatggaatcggtcttcctggaccaaagggtgatgtgggt
ttccaggggcgacatggacctccagggtcaccgggcttaggggaacctggactaccgggg
cctcaaggtccgcagggggtccagggagagaagggccctccgggcgaaggcttcgccgga
cccaagggggaccgaggcctggagggacctagggggcccagaggacagcccggcgctgga
atcaaaggagacaagggggagtttggcacgccgggttttccggggcccataggccggccc
gggcagggaatccagggagagaagggtgtggagggccctcgggggccaccggggggcagg
gggccaccaggagacggataccccgggcccaagggtgaccagggattaccaggggagatc
ggttcaacgggggagagaggggcaggtgaacccggagctaagggcgagccaggctcatcc
ggattggctggattccccggtctcccaggtgaagacggggccccgggacagaagggcgag
acgggtgctgccggtctgagggggccagagggaaccccaggcatcggcatccagggcgag
aagggcgaccagggtcagagaggtatacgaggcctggccgggcctcctgggatcgcgggg
ccttctggatcaaagggggagcctggggtgccaggtcgactgggcatgcctggactgccg
gggcggggcatcgtgggacccaagggcgatctcggccccccaggcccacctggagctttg
ggggagacgggatacgggctgcccgggcccaagggtgaccgtggagaccctggaccgtcg
ggtccattcgggcccaaaggggagggttttccaggccctatgggaacccctggcttaccg
gggccttcgggggaaccaggcccggagggacagggagtccagggaccaaagggtgaagtt
ggcttcaggggcttgccgggtttgccaggtcccccaggcgaaggaattcaaggacttccg
ggtggtgttggacggccaggacccccagggccgacaggtcccccgggacagggcatacaa
gggcccaagggcgaggcggggtctcaaggtgtgacaggccctcggggaccaccaggggaa
ggattttcaggggccaagggtgaccgtggctccggaggggagaggggcctgaagggcatc
aaaggtgatttgggcgatcccggtgttccaggacaatcaggcagaccaggaattaaaggg
gagatgggactcacaagagaagacataattaaaatgatcaaggagatttgcggctgtggc
atcaaatgcaaggagcggcccatggagcttgtgttcgtcatcgacagctcggagagcgtg
ggccccgagaactttgaaatcgtcaaggacttcgtgacggccctggtggaccgtgtgaca
gtgggtcgcaacgccacgcgcatcggcctggttctctacagcctggaggtccagctggtg
ttcgacctggcgcgctacttgaccaagcaggacgtcaaacaggccatacgcaagatcctt
tacatgggggagggcaccaacacggccaccgccattcgcagggccacccaggatgccttc
cacagcgcccgcaccggggtcagtaaggtggccatagtcatcacggacggacagacggac
aagagagagccgctgaagctggagatcgcggtgcgggaggcgcatgcggccaacatcgag
atgtacgccctggggatcgtgaacagctccgacccgacgcagtccgagttcctgagggag
ctcaacctgatcgcctcagaccccgacgcggagcacatgtacctcatcgatgacttcaac
actctgccagccctggagtccaaactagtcagccagttctgtgaagatgagaacggcgcg
ctgatatacaaccgtctcaccaacggcttcgctaacaacggccacaggaatgggaataac
tggaaccaaggcaacgggaaccatggcaacggctacgccaccaccaccaccaccaaccgc
gtggacttcaacggcgggagacaaactggcaccggcgctgacacagagacgtacggtcag
ggcggcaggatcgacataacccagcccgtcaaccctggctcgacagcagtacagacaggg
ccgcgtgacggagtgcagaagggaggtcgtctctccccggactgggcgacgggtcgcgtg
gacacgcccacgataaaccgcaactcgtcctcctcctccaaggaatcgtcgtcctccagt
accgcagggtcttcttcctcctcatcgtcgtcctcctcgtcgggaacgtcttcgtcctca
ggctcggtccaggtggtgaccgcactacgaccggctctcccgaaagaattcgcccccctg
gatcctcgctgtgctctggtcctggaccagggcccgtgccgggactacaacatccgctgg
tactacgacaagcaggccaacgcctgtgcccagttctggtacggagggtgtgaggggaac
cagaaccgttttgacacagaggaggagtgccagcggacatgcgtggtgagcagagacgct
tctgtgtag
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