Esox lucius (northern pike): 105021377
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Entry
105021377 CDS
T04894
Symbol
slit1
Name
(RefSeq) slit homolog 1 protein isoform X1
KO
K06838
slit 1
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
els00536
]
105021377 (slit1)
Glycosaminoglycan binding proteins [BR:
els00536
]
Heparan sulfate / Heparin
Axon guidance molecules
105021377 (slit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
hEGF
Laminin_G_1
LRR_1
LRRNT
LRR_9
LRRCT
DL-JAG_EGF-like
JAG1-like_EGF2
EGF_3
Motif
Other DBs
NCBI-GeneID:
105021377
NCBI-ProteinID:
XP_010887308
LinkDB
All DBs
Position
LG06:10383707..10491374
Genome browser
AA seq
1567 aa
AA seq
DB search
MPGSGACSGAGLGRLPGYWPCVLVLCTLVTGYANACPALCTCSGTTVDCHGLGIKTMPRN
IPRNTERLELNGNNLTRITKSDFAGLKYLRVLQLMENQIGVVERGAFDDMKELERLRLNR
NQLQQLPELLFQKNPALSRLDLSENNILSIPRKAFRGATDIKNLQLDKNHISCIEDGAFR
ALRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLHCDCHLSWLAQWLRQRPTIGL
FTQCTAPPPLRGLNVAEIQKHEFTCSGQSENSGLQPCNLGGGSCPAMCSCSNNIVDCRGK
GLTAIPANLPDTMAEIRLEQNGIKSVPPGAFSPYKKLRRIDLSNNQIAEIAPDAFQGLRS
LNSLVLYGNKITELPKGVFDGLYALQLLLLNANKIHCVRANAFTDLQNLSLLSLYDNKIQ
TVAKGTFASLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPRRLANKRIG
QIKSKKFRCSAKEQYFIPGTEDSRLNNDCNSDPVCPPKCRCESNVVDCSNLRLNKIPEHV
PASTTELRLNNNEITTLEATGVFKTLSQLKKINLSNNKITEIEDGAFEGAGSVNELHLTA
NQLDSVRSGMFKGLEGLRMLMLRNNKISCIHNNSFTGLYNVRLLSLYDNQLTTITPGAFD
TLQTLSTLNLLANSFNCDCRLAWLGDWLRSRKIVTGNPRCQRPAFLKEIPLQDVALPDFR
CEDGVETMSCVPRPQCPSECTCLETVVRCSNKHLRVLPKGIPRNVTELYLDGNQFSVVPK
ELSTFKYLQLVDLSNNKINSLTNSSFSNMTQLTTLILSYNSLRCIPSLAFGGLRSLRLLS
LHGNEISELPDGIFSDVASLSHLAIGANPLYCDCRLRWLSDWVKTGYKEPGIARCAGPTG
MEGKLLLTTPAKKFECHGAVDSGVLAKCNPCLSSPCVNQGICVSDLVEIYRCSCPPGFKG
RNCETALNACVNSPCANGGTCQLNELEEGAFTCDCPLGFEGPACQTNTDDCEDNNCENGA
TCIDGVNQYTCLCPLYYTGEMCEEMEDVCAPGRSPCQHQSTCLITSNGPQCVCSPGYVGD
DCSTDYDDCEESRCQNGAQCVDELNGYTCSCPDNYSGQLCEVPPSPRSLCELADCQNDAP
CVERSGRALCQCLPGFGGPRCEKLVSVNFVDRDSYLLLSDLKNWPQANITLQVSNISLQV
STAEENGILLYNGDNDHIAVELYQGHVKVSYDPGSQPGHAIYSTETINDGQFHTVELVTF
DQMVNLSIDGGLPTTMDSLRGVRPLNGEAPLYVGGRGPLQNTPTSSSSAAGMPVDVHSAA
FRLWQIQNGSSFHGCIQNLYINNELQDFTKTQMKPGVVPGCEPCRKIYCLHGICQPDGAQ
GPVCHCQPGWSGPHCDQLVTNPCQGSKCVHGKCIPLDLQSYRCECVEGYRGALCNQQGEL
FNPCRSRNCKHGRCQISDTGDAYCHCEAGYTGALCDADQEVTRPKPTTESECQGEPVRDF
YQVQRGYAICQTTRMVSWVECSGACDTGACCASQRMKRRKYTFDCSDGTSFSEEVEKTVK
CGCVGCM
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggagtggagcttgttctggtgcaggcttggggaggttgcctgggtactggcca
tgtgtgctggttctctgtaccctggtaacaggctatgccaacgcgtgccctgccctttgt
acttgcagtggcaccacagttgattgccacgggctaggcatcaaaaccatgccccggaat
ataccacgcaatacagagagactggaactgaatgggaataacctaacacgcatcaccaag
agtgacttcgctggactcaagtacctccgcgtgctgcagctgatggagaatcagatcgga
gtcgtagagcgtggagcgtttgacgacatgaaggagctggagagactgcgtctgaatagg
aatcaactgcagcagcttccagaactactgttccagaagaaccctgccctgtcacgcctg
gacctgagtgagaacaacatcctttcaatccccaggaaggctttcagaggagctacagac
atcaagaaccttcagctggataagaaccacattagctgcatcgaggacggggccttccga
gctctgagggggctggaagtactgactctgaacaacaacaacatcagcagcatcccagtg
tccagcttcaaccacatgcccaaactacgtacctttcgtctgcactccaacaacctgcac
tgtgactgtcacctgtcctggttggcccagtggttaagacaaaggcccacgattggtctg
ttcacccagtgcactgccccacccccgcttagaggactcaacgtggccgagatccagaag
catgagtttacctgctcaggtcagtcggagaactccggcttgcagccttgcaaccttggg
ggaggttcatgtcctgccatgtgttcctgcagtaacaacatcgtggactgccgtgggaaa
ggcctgaccgctataccagccaaccttcctgacaccatggcagagattcgcctggagcag
aatggaataaagtcagttcctccaggcgccttctctccctacaagaagctgcgcagaata
gacctgagtaataaccagatagcagagatagctccggatgccttccagggcctgagatcc
ctcaactcacttgtcctgtatgggaataagatcacagagcttcccaaaggagtgtttgac
ggactttatgcactgcagctcctgttgttgaatgccaataagatccactgtgtccgggcc
aatgccttcaccgacctgcagaacctctctctactgtctctctatgacaacaagatccaa
actgtggccaagggcaccttcgcttccctcagagctatacagacacttcacctggcccag
aacccattcatctgtgactgtaacctgaagtggctggcggactacctgaggtccaacccc
atagagaccagcggtgcccgctgtgccagccccagacgactggccaacaaacgcatcggg
cagatcaagagcaagaagttccgctgctctgccaaggaacaatacttcatcccaggcaca
gaggacagccgcctgaataacgactgtaacagtgatcctgtgtgccctcccaaatgtcgc
tgtgagtccaacgtggttgactgttccaacctccgtctgaacaagataccagaacacgtc
ccagcttctaccactgaacttcgtctgaacaacaatgagatcaccacactcgaagctaca
ggtgtcttcaagaccctctcccagctcaaaaagattaacctaagcaacaataaaatcaca
gaaatcgaagatggagcattcgagggggcggggtctgtcaatgaacttcacctcactgcc
aatcaactggactctgtccgcagtggaatgttcaaaggactggagggactacgcatgcta
atgttgaggaacaacaagatcagctgtatccataataacagtttcaccgggctgtacaac
gttcgtctgctgtctctttatgacaaccagctgaccaccatcactccgggagccttcgac
actcttcagacactgtccacacttaacctcctggctaactccttcaactgtgactgtcgt
ttggcctggcttggggattggctgaggagcaggaagatcgtcactggcaaccctcgatgt
cagcgccctgccttcctcaaagagatcccgctacaggatgtggcactccctgacttccgc
tgtgaagacggcgtggagacgatgagctgcgtgccaaggcctcagtgtcccagtgagtgc
acctgtctggagacggtggtgcgctgcagtaacaaacacctccgcgtgcttcccaaaggg
atccccagaaacgtcaccgagctatacctagatggaaaccagttcagcgtggtgccaaag
gagctgtctacctttaaataccttcaattggtagaccttagcaacaacaagatcaactct
ctcaccaactcctccttctccaacatgacccagctcaccacgctgatcctgagttacaac
tccctgcgctgcattcccagtctggctttcggtggactacgctcccttcgattactgtct
ctccatggcaacgagatctccgagcttcccgatggcatcttcagtgacgtggcctctctg
tctcaccttgctattggtgccaaccccttgtactgtgactgccgtctgcgctggctgtct
gactgggtaaagactgggtacaaggagcctggcatcgcccgctgtgccggaccaacggga
atggagggcaaacttctgctgaccaccccggccaaaaagtttgagtgccacggtgcggtg
gacagtggggtcctggccaagtgcaacccttgtctgtccagcccctgtgtcaaccagggg
atctgtgtcagtgatctggtggagatctaccggtgcagctgtcctcctggattcaagggt
agaaactgtgagactgccctgaacgcctgtgtcaacagcccctgtgccaacggaggcacc
tgccaactcaatgagctggaggaaggggcattcacctgtgactgtccccttggatttgag
ggtccagcctgccagaccaacacagatgactgtgaagacaacaactgtgaaaacggagct
acctgtatagatggggtcaaccaatatacctgcctgtgtccactttattacacaggggag
atgtgtgaagagatggaggatgtgtgtgctccaggtcgcagcccgtgtcaacaccagtcc
acctgtctcatcacgtccaatggaccgcagtgtgtgtgttccccgggctacgttggggac
gactgcagcacggactacgacgactgtgaggagagccgctgtcagaacggtgcccagtgt
gtcgacgagctcaacgggtacacctgctcctgcccagacaactacagcggtcagttgtgt
gaggtgcccccctccccgcggtctctgtgtgaactggcggactgccagaacgacgccccg
tgcgtggaacggtccggccgggcactctgccagtgtctccccgggttcggagggcctcgc
tgtgagaagctggtcagtgtgaactttgtggacagggattcctacctgctgctgtctgac
ctcaagaactggccccaggctaacatcacactgcaggtatctaacatctcactccaggtc
tccacagcagaggagaacggtatcctgctgtataatggggacaacgatcacatcgctgtg
gagctgtaccagggtcacgttaaggtcagctacgaccctgggagccagcccggacacgct
atctacagtactgagacaatcaacgacggtcagttccacacagtggagctggtgaccttt
gaccagatggtgaacctgtcaatcgacgggggtctccccaccaccatggacagcctgagg
ggggtccggcccctcaatggggaggctccgctatacgtggggggtaggggccctctccag
aacacacctacttcctcctcctctgctgcaggaatgccggtggatgtccactcagcagca
ttccggctctggcagattcaaaatggctccagtttccacggctgcatccagaacctgtat
atcaacaacgagctacaggacttcactaagacccagatgaaacctggtgtggtgccaggc
tgtgagccctgcagaaagatctactgcctgcatggcatctgccagccggacggggcacag
ggaccggtctgccactgccaaccaggctggagcggaccacactgtgaccagctggtcact
aatccatgccagggaagcaagtgcgtgcacgggaagtgtattcccctggacctgcagtca
taccgctgtgagtgtgtggagggctaccgtggggccctgtgtaaccagcagggggagctg
ttcaacccctgccgcagtcgcaactgtaaacacggacgctgccagatctctgacacaggg
gacgcttactgccactgtgaggcgggatacaccggagcgctctgtgacgcagaccaagag
gtcacccggcccaaaccaaccacagagtcagagtgccaaggggagcccgtgagggacttc
taccaggtgcagcgtgggtacgccatctgccagactacacgcatggtctcctgggtagag
tgctccggcgcctgtgacacgggggcctgctgtgccagtcagcgaatgaaacgccggaaa
tacaccttcgactgcagcgacggaacctcgttcagcgaggaggtggagaaaaccgtcaag
tgtggctgtgtgggctgtatgtag
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integrated database retrieval system
