Esox lucius (northern pike): 105023438
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Entry
105023438 CDS
T04894
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
els
Esox lucius (northern pike)
Pathway
els03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105023438 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105023438 (arid2)
03021 Transcription machinery [BR:
els03021
]
105023438 (arid2)
03036 Chromosome and associated proteins [BR:
els03036
]
105023438 (arid2)
Transcription factors [BR:
els03000
]
Eukaryotic type
Helix-turn-helix
ARID
105023438 (arid2)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105023438 (arid2)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
105023438 (arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
Pox_D5
Motif
Other DBs
NCBI-GeneID:
105023438
NCBI-ProteinID:
XP_010890936
LinkDB
All DBs
Position
LG23:complement(10902343..10932904)
Genome browser
AA seq
1653 aa
AA seq
DB search
MANSTGKNLLDQRRKGLAFLDELRQFHQSRGSPFKKIPIVGGKELDLNALYIRVISLGGF
AKVSDKNQWSELGEDFNFPRSCSNAAFVLKQYYLRYLEKYEKVHHFGEDDEEVQPGNPKP
SLPIGAIPCSYNYQQHTVSDYLRQSYGLSMEFTPPCDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHAMQLEKDPKLITLLLAHAGVFDDSLGSFSSVFGMDWKEQTSRDFVKFWKDV
VEDSEVRDLIWDKTTQTQDGTTGDEHWGSLFHPPRNLGIGDIEGQRVQQVGVILRNLSFE
EANVKLLAANRTCLRFLLLCAHCHFISLRQLGLDTLGNVAGELQLDPVDFRTTHLMFHTI
TKCLMSRDRFLKMRAMEILGNLSKAEDNSVLICEYVDQESYREVISLLSLPDLMLLMSSL
EVLYLLAQLGEIPCSKIASIDRSIDLLVRLVSVDLHTFGPDALTAVRLMEHQAAGQSQVS
EVRPQLVEQLPAPLQGGPGSAARVPAQSTPPPPGIVELDGEKFTVQWLNAHFETSAEGSV
SRSEMYSEYLAACSKMGRAGVLASQGFLKCLRTIFPNHTVKRLEDTKPNAQAHIHVVGVK
RRSIPLPIQLYYQQQASPSLGSKHEVPVDQPPTPSGIVPGHAGLARPPVPSLTSNPAAPP
VAFTTQDGVAHPHTFQTVPRPALQPQATSPQQPHTAPQSRPGDILKTAMVQSSIPTSGAV
IQNHSPNMTQPLHHQQVMAPTGTPVTLFQPVPQGHIFTARVQGVTLPHTPPSTVSQGPQQ
DTAVFSAPQHYAAVSATCSSIQNFQVSGGQVFTIAGVPNAQGSRVTFQNIAPKPAPSQAS
APPTTAHNQQQSSVVIVSPNPQQNQAYAPAIHQIVLANPSSIPGGQAMQLAGQPPAPSNP
SPCPPASAPLSQGLPSPSNPQPQMQGPATVSQMLSVKRQQFNPQQQFQIQPQPLSQQQPS
PHPTSAESSLIKQLLLPKRPSTPGGKLILPAPQVLPPPCSTHAPGQQVLYQVAPPGQPQP
LNVQLVPGQLQSPGGALQTVQLISTSSPAAIIQGPASGGQVTFTVVPNTGFTTSASAAAA
QVSQGAAAPGLPAVQTGNTLHGPPAPFRGDKIICQKEEEAKDATGLHIHERKIEVMENSS
LADGAVTKTSNGDLVGGNAPGAKLLNGRKCMDSSLPPYHSGNSQGASANGPVSESCPTNG
KQASGLANPQEGHVDPKKALVNGVCDFEKGDNSPGAHLSKNIPNHIASKHLGNGEVGPPQ
KLHGTPLEPSAPQQDTAKAEQAERLANGPQTTGPFSNGPMGPGPNYALPALRQQLFPTVT
VNSQSSTGPGTLPANGVSGESRALKRPAEDDRGSGIPSKVGVRIITISDPNKAGCSATMV
AVPAGADPSTVAKVAIENATQQRNCSPIQATSSTPGFMPPPPPVAQPAQGVSASPDTPLS
GPEAVVVPPEQMRKAGQNFKCLWQSCKRWFETPSQVFYHAATQHGGKEVYPGQCLWEGCE
PFPRQRLSFITHLQDKHCSRDALLAALKLEQEQTQTQDPNQKTSKPQPVASSTPAPRAQK
AIVNHPSAALMALRRGSRNLVFRDFTDEKEGPMTKHIRLTAALTLKNIAKYSDCGRKLVK
RHESHLSVLALSNMEVSTTLAKCLYELTRSLQA
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacgggaaaaaatttactagatcagcgaaggaaaggactggctttccta
gacgagctgcggcaatttcaccaaagcagaggatcgccgttcaagaagattcctatcgtg
ggtgggaaagagctggatcttaatgctctctatatcagagtcatttcgttaggtggattt
gctaaggtttctgacaagaatcagtggtctgagctgggtgaagattttaactttccaagg
agttgttcaaacgctgcatttgttttaaaacagtactaccttcgatatttagaaaagtat
gaaaaagtccatcactttggagaggatgatgaagaggtacagcctgggaacccgaaacca
tctcttccaattggtgcaatcccctgctcttacaactaccagcaacacactgtatcagac
tatctccgccaaagctatgggctgtccatggagttcactccaccatgtgactacaacaaa
ctggtgctttccctcctgtcgggcttgcccaatgaagtggacttcgcgatcaatgtttgt
actctcctttccaatgagagcaaacatgccatgcagctggagaaggacccgaaactcatc
acgttgctgttggcccacgcaggtgtctttgatgactcactaggcagcttctcctctgtg
tttggaatggactggaaggagcaaacctcccgggactttgtgaagttttggaaggatgtg
gtagaggactctgaagtaagggacctcatctgggacaagaccacccagacacaagatggt
acgacgggggacgagcactggggcagcctttttcacccgccgcgcaacctgggcatcggt
gacattgaaggccagcgggtccagcaggtgggcgtcatcctccgcaacctctccttcgag
gaggccaacgtcaaactgctggctgctaaccgaacctgcctgcgcttcctcttgctgtgc
gcccactgccacttcatctctctacgacagctgggactggacacattaggcaacgtggcc
ggagagcttcagttggatccagttgactttcgaacaactcatttaatgtttcacaccatc
accaaatgcttgatgtcaagggacaggttcctgaagatgagggccatggagatactgggc
aatctgagtaaggcagaggacaacagcgttctgatctgtgagtatgtagaccaggaatcg
taccgggaggtgatcagcctgctgtcgctgcccgacctcatgctcctcatgtcctccctg
gaggtcctctacctgctggcccagctgggggagatcccatgcagcaagatcgcctccatt
gacaggagcatagatctgctggttcggctggtgtccgtggacctgcacacgttcggccct
gatgcgctgacggccgtgaggctgatggagcaccaggctgccgggcagagccaggtgtct
gaggtgcggcctcaactggtggaacagctgcctgctcccctgcagggcgggcccgggtca
gcagcaagagtccctgcccagtccactcctcctccacctggtattgttgagctagatggg
gagaagtttacagtgcagtggctgaatgcccacttcgagacgagcgcggagggctccgtc
tcccgctcagagatgtactccgagtaccttgccgcctgcagcaagatgggacgtgctggc
gtcctggcctcccaaggcttcctcaaatgtctacggaccatcttcccaaaccacacagta
aagcggctggaggacacgaagcccaacgcacaggctcacatacatgtggtgggggtcaaa
cggcggtccatccccctgcccatccagctgtactaccagcagcaggcgagcccgtcattg
gggtccaagcacgaagtcccagttgaccagcccccaacaccctcaggcattgtccctggg
cacgctgggttggcccgtcctccagtccccagccttacttcgaacccggccgcaccaccg
gtggcattcaccacgcaggacggcgtagcccacccccacacatttcagactgttccccgg
cccgccctccaaccccaggccacgtcgccgcaacaacctcacaccgctccgcagtcccgg
cccggcgacatcctgaaaacggccatggtccagagctccatccccacctctggagcggtc
atccagaaccacagccctaatatgacccaaccgctccaccatcaacaagtcatggccccc
actgggacccccgtcacactgttccaacccgtaccgcagggacacatcttcacggcgcgg
gttcagggcgtgactctgccacacacacccccctccacggtatcccagggtccccaacag
gacacggcggtgttctcggcaccccagcactacgccgccgtgtccgccacctgctcctcg
atacagaacttccaggtgagcgggggccaggtgttcaccattgccggtgtgcccaatgcc
cagggttctcgtgtcaccttccagaacattgcccccaagcccgccccctcgcaggccagt
gcgccgcctacaaccgctcataaccagcagcagtctagcgtggtcatcgtcagccccaac
ccccagcagaaccaggcatatgccccggccatccatcaaatcgtgctggccaacccctcc
tccattcctggcggccaggccatgcaactggcaggacagcctcccgccccttccaatccc
tcgccctgtccccccgcctccgctccactgtcccagggcctgccgtctccttccaacccc
cagccccaaatgcagggccctgctacagtcagccagatgctgtcggtcaaacggcaacag
ttcaacccccagcagcagttccagattcagccccaaccgctgtctcagcagcagccctcc
ccccaccctacctccgccgagtccagcctgatcaaacagttactgcttccaaagcggccc
tccacgcccggcggaaagctgatcctgcccgcgcctcaggtgctgcctccaccttgcagc
acgcacgcccccggccagcaggtgctctaccaggtcgctccaccaggccagcctcagcca
ctcaatgtacagctggttcccggccagctccagtcccccgggggggctctccagacggtg
cagctcatttccaccagcagcccagcagccattatccagggcccggcgtccggtggccag
gtcaccttcaccgtggtgcccaacacgggcttcaccacttccgcctctgcggccgccgcc
caggtcagccagggagccgctgcgccaggcctgccggcggtccagacgggcaacaccctc
cacggcccgccggcgcccttcaggggggacaagatcatctgccagaaggaggaggaggcc
aaggatgctacgggtctacacatccacgaacgcaagatcgaggtgatggagaactcctct
ctggctgacggcgccgtcaccaaaaccagcaatggggacctggtagggggcaatgcccca
ggggccaagctgcttaacggaaggaagtgcatggactccagtctacctccgtaccactca
gggaacagccaaggggccagcgccaatgggccggtcagcgagagctgcccaactaatgga
aagcaggcctctggcctggctaacccacaggagggccacgttgaccccaaaaaggctctc
gtcaacggggtctgtgactttgagaaaggggacaactcccctggtgcccacttaagcaaa
aacattccaaatcacatcgcttccaaacacttgggaaacggggaggtgggtcctcctcaa
aaactgcatgggactcccctggagccctctgccccccaacaggacactgccaaagctgag
caggcagagcgcctggccaatgggcctcagacaacaggccccttctctaatggacctatg
gggccggggcctaactatgccctgcctgctctcaggcagcagctgttccccactgtcact
gtaaactcccagagctccacggggcccgggaccctcccggccaatggcgtgagcggcgag
agccgcgcgctcaagaggccggctgaggacgaccgggggtctgggatcccgagcaaggtg
ggcgtgagaatcatcaccatcagcgaccccaacaaggcaggctgcagtgccactatggtg
gcggtgcccgctggggctgacccaagcacagtagccaaagtagcaatagaaaacgccaca
cagcagaggaactgctcgcctatacaggcaactagctctacgcctggttttatgccgcct
cctcccccggtggctcagcctgctcagggtgtaagcgccagcccggacaccccactctct
ggtcctgaagctgtggttgtgcccccggagcagatgaggaaagcaggacagaacttcaag
tgtctgtggcaatcctgtaaacggtggtttgagacgccgtctcaggtgttctaccatgca
gccacacagcatggtggcaaagaagtgtacccaggccagtgcctctgggaagggtgtgaa
ccttttcctcggcagagactctccttcattacccatctacaggataagcactgttctcga
gacgccctgttggccgcactaaaactcgagcaggagcagacgcagacgcaagaccccaat
caaaaaacttccaagcctcagccggtggcgagcagcactccagcaccacgagcacagaaa
gctattgtcaatcatccaagcgcagccctcatggccctacgcagaggctctcggaacctg
gtgttcagggacttcacagacgagaaagagggaccaatgaccaaacacatacgacttact
gctgccttaacgctaaagaacatcgccaagtactcagactgtggtcgaaagttggtgaag
aggcacgagagccacctctctgtactggcactcagtaacatggaggtttccaccacgctc
gccaaatgcctttatgaactgactcgttctctccaagcttga
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integrated database retrieval system
