Esox lucius (northern pike): 105024128
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Entry
105024128 CDS
T04894
Symbol
supt5h
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
els
Esox lucius (northern pike)
Pathway
els03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105024128 (supt5h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105024128 (supt5h)
03019 Messenger RNA biogenesis [BR:
els03019
]
105024128 (supt5h)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105024128 (supt5h)
RNA polymerase I system
105024128 (supt5h)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
105024128 (supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
DUF3912
DUF150_C
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
105024128
NCBI-ProteinID:
XP_010892149
LinkDB
All DBs
Position
LG01:complement(12980244..13015092)
Genome browser
AA seq
1091 aa
AA seq
DB search
MSDSEDSDFSDNQSEQSSEAEEVDKNEAEEDGQASLSGSDKAAEEEGEDLADEEEYDDEE
EEDDDDRPRKKPRHGGFILDEADVDDEDEDEEEPWEDGAEDILEKVNEEAEVSNIDHVVL
DEDNSGSRRLQNLWRDSREEALGEYYMRKYAKQSGNDFPGGSEELSDDITQQQLLPGVKD
PNLWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVESYKQTHVK
AAIEGVGNLRMGFWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYV
EPSQNTISLKMIPRIDLDRIKARMSMKDWFAKRKKFKRPAQRLFDAEKIRSLGGDVSHDG
DFMIFEANRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTETAGKER
EHNLQAGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGD
HVKVIAGRYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEW
GELVQLDPQTVGVIVRLERETFQVLNMHGKVLTVRHQGVNRRKDNRFAVALDSEQNNIHV
KDIVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHVVLAGGSKPRDVTN
FTVGGFAPMSPRISSPMHPGGGGGQQQRGGGGGGGGGGMGRGRGRRDNDLIGQTVRISQG
PYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTMGAKRHGGMTSTHGRTPMYGSQT
PMYGTGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPNNPNTPSRADDD
YEFGYDDEPSPSPQGYGGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSPYAA
PSPQGSYQPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP
GAPSPGGYNPHTPGSNIDQTSCDWVTTDILVRVKDTFLDSQVVNQTGVIRSVTGGMCSVF
LQDTEKVVSISSEHLEPVTPTKNNKVKVILGEDREATGILLSIDGDDGIVRMELDDQLKI
LNLRFLGRLEL
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcgacttctctgacaaccagagtgaacaaagcagcgaagct
gaagaggttgacaaaaatgaggcagaggaagatgggcaggcaagtttatctggcagtgat
aaggcagctgaagaggaaggggaagacctagcagatgaggaggaatatgatgatgaagag
gaagaggatgatgatgatcgtccccgaaagaaaccgaggcatggaggttttatcttggat
gaagccgatgttgatgatgaagatgaagatgaagaagaaccatgggaagacggcgctgaa
gatattttggagaaagttaacgaggaggctgaggtttccaacattgaccatgtggtcctg
gatgaggacaactctggttcccgcaggcttcagaacctctggcgagattccagagaggag
gccttgggtgaatattacatgaggaagtatgctaagcagtcaggaaatgattttcctggt
ggttctgaagaactttctgatgacatcacacaacagcagcttctccctggcgttaaggat
cctaatctttggactgtgaagtgtaagattggcgaagagagagcaactgccattgccttg
atgaggaaattcattgcctatcaattcacagacacgccactccaaatcaagtcggtagtg
gctccagaacatgtcaaaggttacatctatgttgagtcgtacaagcagactcatgtcaag
gctgccattgagggagtgggcaacctgaggatgggcttctggaaccagcagatggttcct
attaaggagatgacagacgtcctcaaggtggtcaaagaggtgaccaacctcaagcccaag
tcatgggtccgactcaagagaggcctctataaagatgacattgcccaggtggactatgtg
gagcccagtcagaacacaatatcactgaagatgatccctaggatagatttagaccgaatc
aaggcccggatgagcatgaaagactggtttgcaaagcggaagaagttcaagagaccagcc
cagaggctctttgatgcagaaaagatcaggtctcttggtggggatgttagccatgatgga
gacttcatgatatttgaagctaaccgctacagtcgcaaaggtttccttttcaaaagcttt
gccatgtctgctgtgatcactgaaggagttaagcccacactgtcagagctggagaaattt
gaggaccagccagaaggcattgatctagaggtggttacggaaactgcaggtaaggagcgt
gagcacaacctccaagctggggacaatgtggaggtgtgtgagggcgagctgatcaacttg
cagggcaagatcctgagtgttgacggcaacaagatcaccatcatgccaaaacacgaggac
ctcaaggatcctttggagttcccggcccatgagttgaggaagtactttcgtatgggtgac
catgtcaaggtcatcgcaggccgctacgagggcgacaccggtctcattgtacgggtggag
gagaactttgtcatcctcttttcggatctcaccatgcacgagttgaaggtcctgcctcgg
gacttgcagctgtgctctgagacggcatcaggggttgatgccggcgggcagcacgagtgg
ggagagctcgtccaactggatcctcagaccgttggagtcatcgtccggctggagagggag
actttccaggttctcaacatgcacggcaaagtgctgacagtgcgtcaccaaggggtgaat
cggcgaaaagacaaccgcttcgccgtggctctggattcggagcagaacaacatccatgtc
aaagacattgtcaaagtcatcgacgggccacactctggtcgtgagggagagatccgccac
cttttccgtggctttgccttcttgcactgtaagaagctagtggagaacggaggcatgttt
gtctgcaagacgcgccatgtggttctggctggggggtcaaagcccagagacgttacaaac
ttcacagttggaggctttgccccgatgagtcctcgtatcagcagccccatgcaccctgga
ggtggaggtggccagcagcagagaggcggaggaggtggaggaggaggagggggtatgggc
cgtggccgggggaggagagacaacgacctgattggacagacagtccgcatctcccaggga
ccctacaagggctacattggagtagtaaaggatgccacggagtcgaccgccagagtggag
cttcattcaacctgccagaccatctcggtggaccgacagcgtctcactacgatgggagcc
aagaggcatggcggaatgacctccacacacggacgtacccccatgtacggctcccagacc
ccgatgtatgggacaggctcccgtaccccgatgtacggctcccagacgcccctacacgac
gggagccgtacaccacactacggctcgcagaccccgctgcatgatgggagcaggacgccg
gggcagagtggagcgtgggaccccaacaacccgaacactccttccagggctgacgatgac
tatgagtttggttatgatgacgagccttccccctccccccagggctacgggggcacgcct
aacccccaaacacctggttacccagaggtgccctcaccccaggtcaacccccagtacaac
ccccagactccaggcaccccagccatgtacaacacggaacagtactcgccgtatgcggcc
ccgtccccgcagggctcgtaccagcccagccccagcccccagagctaccaccaggtggcc
cccagcccagtgggctaccagaacacacactcaccagccagctaccaccccacgccctca
cccatggcgtaccaggcaagtccaagtcccagcccggtaggctacagccccatgacccct
ggcgccccctccccaggcggctacaacccacacacacccggctccaacatcgaccaaacc
tcctgcgactgggtcactaccgacatcctggtgcgtgttaaagacaccttcctggacagc
caggtggtcaaccagactggcgtcatccgcagtgttacgggcggcatgtgctctgtgttc
ctccaggacacggagaaagtggtgagcatttccagtgaacacctggagcctgtaaccccc
actaagaacaacaaggtgaaggtgattctaggtgaggatcgtgaggccacagggatcctg
ctgagtattgacggggacgatggcattgtcaggatggagctggatgaccagctcaagatc
ctcaacctccgcttcctgggcaggctggagctctga
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integrated database retrieval system
