Esox lucius (northern pike): 105025298
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Entry
105025298 CDS
T04894
Symbol
jmjd1c
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
els03036
]
105025298 (jmjd1c)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
105025298 (jmjd1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
FYVE
zf-C5HC2
C1_2
Motif
Other DBs
NCBI-GeneID:
105025298
NCBI-ProteinID:
XP_012989615
LinkDB
All DBs
Position
LG06:7715192..7841310
Genome browser
AA seq
2709 aa
AA seq
DB search
MAVEARPELVGKRFLCVSGDEPLVLGDIGRWGWRAGVIRAVTHRDNDNSELTVYVEFDDL
EWEKREWVKVYEDFQVFLLEQQLVWAKRSEGSALGGSHQGPKAKQIQWPALTFRTLVGRS
TLGSTTAVEFLSDRRLDFLLDGAACQPYQDEVDSLSPVLRDNPQLQEEVRFWLKDQKVQE
IFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMIVMNDQVLEPQNVDPSMVQM
TFLDDVVHSLLKGENIGIQSRRRSRSSNNQNNSAHQTAGGRTSGAAGREQGHYTRAQANS
PRPVMNSAVGAVKQGSVVAPNQPAQAQYSPSQGQTQGQRGCRSSRRKGSDSSAPDDDTKV
KEDKLDGNERAGRDVSRSKGNKQTAVNKRRKAEEEEKKLDLKRLKTERTVTSDFSESSDS
EVSTKRTTTAESSSSSEHNSEEELKGRRSTSKPCHQGEDHKIQGCTIREEPSLIDRLSPW
GEELKKAESQPARQQPPPLSSSTFSLSSAPSEVLGGCIIEANSTVKSPSQNQPKDLYTSS
GGAASHAPSKCVLDITAVDANLASQENSEAVSALLASQNASEPSYIPEPSRHLVLNPSMT
PPSPSPSPTPLRKNPSEGNPRSAPVSEDQQEAARSLGGKMDVVRPVTSVSETAAVAERER
VQPQLHASMVPCIRNASLADEARKSHKPSPSPDIPKTKPLPSPDAVKSKMHSVPETGCKP
KPLTSPEVSKHKVRHPDNPPPAPPTSRSVLLKPEPEATPPRSSFKPVPARGTTSAPEATK
SPLIIDKNEHFTVYRDPALVRPEQESNRVSYLHLHPLHTTSSGHHHPSHLLPSSHAHHQV
HHPHLLPGVLPGLPPGSLLGGHPRVDSSGLGHLGLAHHHPHQVQQHQAFLQQHQQPPGSL
LAQTHSHSSASYNQLGLYPIIWQYPNGTHSYPPGLNMPGSKWVHPENAVNSEANVRRNTA
SPWLHHQHPPVSSSDSLGLLSHVPVRPASADPHRSEPHRTIKINPHASPPLPLSKTTGEL
HKEELEKKGFVDPIRTITLAHLKQERDRSRTPTGKDGHLHRLYLEAHKQQRMAQQEAGER
ASKYKEENRRILQESIEVAPFTAKIRSGETDREPPYSRVPPLPPQPPPHPSPKGNEADRP
GAERYGFKQHATAQHHSLPQSNYFTTLSNSVVNEPPRLYPSKELNSYFEKVTREQGSAAG
PGGGAAFGSKSLSKPPPLIKHHPDGEGLVGKMSEQLSQQVGLSSMQHHPLHTIVSPASER
RSPAMSPSSSQLQNQLRCMPALHRAPVFHPPTQQTLDRKEVGYGRLSPPTLTPIQPVSSA
SKVSEQQKPPTLLPELREVGALCKVSAETTAAATTTTAGAWHAGDSRVHDQPGWHSERSR
GGKPGAATASVIVRPSTCIKYDGSPGPRTAPPAKEPASGRLFPAGRTQTDCLKPAEERER
GRESGGRVILPNTNLDESGCMQQYRRTLMRASPAAVPAGAALPAAPDPACNMRSDVPTAT
PAAASRGMPCRGGEAAYCASDASIASGPRVGPFHMGPGAQLQEGCSSRTSSPSLHAQPGP
SPGSSQSYSGSFIHLKKHKAVLAAQQSRGPGSGGVSGPESLSEPAGGKAPHSSPPPPSSS
QDPSTNPAVCKASPNPGPSPLPNGQPVQMSPNPNQSQSQPNYHKLKKAWLTRHSEEDSHR
STVAVIKTEKLEKPPASVSPAVSEMEMIKPCTVALIASTSGDVEMKMEEVKGQEDKTTPE
DRKTRRGNKRTYDHDSATESGEDSDASESSKQEQRAKRQPKPTYKKKQNDLQKRKGEGEK
DEDDMKPNGIFRSAREKTKLKLASSNGIPRSVLRDWRKVKKLKQTGESFLQDDSCSEIGP
NLQKCRECRVVRSKKGEEPAHSPVFCRFYYFRRLSYSKNGVIRVDGFSTPDQFDDEALSL
WAPDVDQENQLDPDSSKYILSYIGDKFCQMVTTENTAATWIKKDAQVAWKRAVRGVREMC
DACEATLFNIHWVCQKCGFVVCLDCYKAKERKNPKDKEQYVWLKCVKGQPHDHKHLMPTQ
IIPGTVLTELVSAMHMFRERYNIKAHCACTAKPNTLLNKLPTTNGVSQVLQNVLNHCNKI
SLCNVKTEPGQLIPSQGKPETNGGSSPTSDTSSDPKLTPPESQSPLHFLADLAEQKSREE
KKENKKSPVGKTVKEEDHHDVSALESLHCKASSLVSNSSEQGSTLRDLLTTTAGKLRMGS
TDAGIAFAPVYSTATQTGKSGRSMPNILDDIIASVVENKIPASRGAKLSLKLEATATTTA
EEREVRPEKTERKRQSGPGGVPDEPLPAKPQVEKTPPPLADAPHHWLYQHRLLWLKDHRH
PGNRKLFRECWRQGQPVLVSGVHKRLNAALWKAESFNQEFADHQGDLVNCKDGIISNSGI
KEFWDGFEDLTKRPKSKDGETLVYRLKDWPSGEEFMALMPSRYDDLMRNLPLPEYSDPEG
NLNLASHLPSFFVRPDLGPRLCCAYGVAASQEQDFGTANLHMEVSDIVSVLVYVGVAKGN
GVLSKTGVLKRLEEEDLDDSVKRRLKDSSETPGALWHIYVSKDVEKIKEFLHKVAKEQGV
EVPAEHDPIRELGWYLSRKLRQRLWEDHGVQGWTVVQFLGDSVLIPAGALHQVQNLHSCV
QVINDFVSPEHVFHSFNLTQELRSSKEEFNYEDKLQVKNILYHCVKDAVTSLRRFSQKEQ
EEEEEEKNS
NT seq
8130 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggaagcgcggccggagctggttgggaagcggttcctatgtgtcagtggagac
gagccgctggttctcggggatatcgggcgctggggctggcgagccggggtcatccgagcg
gttactcaccgagacaacgacaattcagagttgacggtgtacgtggagtttgacgacctg
gagtgggagaagcgtgagtgggtcaaagtttacgaggacttccaggtgttcctgcttgag
cagcagttggtgtgggccaagaggagcgagggctccgctctgggaggcagccaccagggg
cctaaagccaagcagatccagtggccggctctgacgttccggacgctggtggggagatct
actctgggttctaccacagctgttgagttcctctctgaccgacgactcgactttctcttg
gatggcgcagcttgccagccctaccaggatgaagtggacagtctgagtcctgttctcaga
gataaccctcagctccaggaagaggttaggttctggctcaaagatcagaaggttcaggaa
atttttatgcaaggcccatattcattaaatggctaccgggttcgtgtttacagacaagac
tcagcgactcagtggttcaccgggatcatcacacatcacgacctcttcagccgcaacatg
attgtgatgaatgaccaggtcctagagccacagaacgttgacccctctatggtacagatg
acctttctagacgatgttgtccactcactgctaaaaggagagaacatcggcatccagtcc
agacgtagatcacgctcaagcaacaaccagaacaactctgcccaccagacggcaggaggg
agaaccagcggcgccgcaggaagagagcagggccactatactcgtgcccaagccaacagc
cccagaccagtgatgaactcggcagttggagcggtgaagcaggggtcggtggtggccccg
aatcagccggcccaggctcagtactcccccagccaggggcagacccaggggcaacgcggc
tgtcgctcctccaggaggaagggatctgacagcagcgcccctgacgacgacaccaaggtc
aaagaggacaaactggacggcaacgagagagccgggagagacgtctcgaggagtaagggc
aacaaacagaccgctgtgaacaagcggaggaaagcggaggaggaggagaagaaattggat
ttgaaaagactgaaaacagagcggacggtgacgtctgacttctctgagagcagcgactcc
gaggtgtccaccaagagaaccaccaccgcagaatcctcctcttcctccgagcacaactca
gaggaggagctgaaaggaaggaggagcacttctaagccttgccatcagggggaggaccat
aaaatccagggttgtacgattagggaggagccttctctgattgaccgtctctccccctgg
ggggaggagcttaagaaggcagagtctcagccggcacggcaacagccccctcccctgtcg
tcgtctactttctccctgagctccgccccctccgaggtcctggggggttgcatcattgag
gccaacagcactgtgaaaagcccctctcagaaccagcccaaggacctgtacaccagctct
gggggggctgcaagccatgcgccctctaagtgtgtgttggacatcacagcagtggatgcc
aacctggcctcccaggagaactctgaggccgtctccgccctgctggcgtcccagaatgca
tctgagccctcgtacatccctgagcccagcagacatttggtgctaaacccctccatgacc
cctccgtctccgtctccttcgcccactcccctacgcaagaacccgtcggagggtaacccg
aggagcgcgcctgtgtcggaggatcagcaggaggcggcgcgaagcctgggcggtaagatg
gacgtggtccgaccggtcacctcggtcagtgagactgctgccgtggccgagagagagagg
gttcagccacagctccacgcgtccatggtgccatgcatcaggaacgcctcattggctgac
gaggccaggaagtctcacaagccaagcccctccccggacatccccaaaacgaaacccctc
ccctcgcctgacgccgtcaaatctaaaatgcacagtgtcccagagacggggtgtaaacct
aagcccctgacctccccggaggtgtccaaacataaagtccgtcatccggacaacccccca
ccggcaccgcccactagtcgctccgtacttctcaaacctgagcccgaagccactccccct
cgctcaagcttcaagccggtcccggcccgagggacgacatcggcgccggaggccactaag
agcccgctgatcatcgacaagaatgagcatttcacggtgtaccgagaccctgcactggtc
cgacccgagcaggagtccaaccgcgtgtcctacctccacctgcacccgctccacaccact
tcctctggccaccaccacccctcacacctcctcccctcctcccacgcacatcaccaggtt
caccacccccacctccttcctggagtgctccctggcctgcccccgggcagcctgctgggg
ggtcacccgcgtgtggactcctccggccttgggcacctgggcctggctcaccatcacccc
catcaggtccagcagcaccaggccttccttcagcaacaccagcagcccccgggctccctg
ctggcccagacacacagtcactcttcagcctcctacaaccagctgggcctctaccccatc
atttggcagtaccctaatgggacccactcctaccccccagggctcaacatgcccgggtcc
aaatgggtgcacccagaaaatgcggtgaactccgaggctaacgtgaggaggaacacggcc
agtccctggctgcatcaccagcacccgcccgtgtcgtcctctgacagcctgggcttgctg
agccacgtgccagtacgaccggccagcgccgacccccaccggtcagaaccacaccgaacc
attaagatcaatccgcacgccagcccccctctgcctctgtccaagaccactggagaactg
cacaaagaagagctggagaaaaagggttttgtggacccgatcagaaccatcacactggcc
cacctgaaacaggagcgggaccgtagcaggaccccgaccgggaaggacggccacctgcac
cgcctctacctggaggcccacaaacagcagaggatggcccagcaggaggcgggggagcgg
gccagcaaatacaaggaggagaacaggcgcatcctgcaggagagcatcgaggtggcccct
ttcaccgctaagatccgctccggcgagacggacagggagcccccgtactcccgcgtcccc
cccctgcccccccagccaccgccccaccccagccccaagggcaacgaggcggaccggccg
ggggcagagcgctacgggttcaagcagcacgccacggcccagcaccacagcctgccgcag
agcaactacttcaccaccctgtccaacagcgtggtcaacgagccgccgcgcctctacccg
tccaaggagctcaactcctacttcgagaaggtgaccagggagcaagggtcagccgccggc
ccggggggaggcgccgcgttcggctccaagtccctgtccaaacccccacccctcattaaa
caccacccggatggggagggcctggtggggaagatgtcggagcagctgtcccagcaggtg
gggctgtcctcgatgcagcaccacccgctacacaccatcgtgagccccgccagtgagagg
aggagcccggccatgtccccgtcctccagccagctccagaaccagctgcggtgcatgccg
gcgctccaccgagcccccgtcttccaccctcccactcagcagacactggacaggaaggag
gtgggctacggccgcctttccccgcccaccctgaccccgatccagccggtcagctccgcc
agcaaggtgtcggagcagcagaaaccccccaccctgctgccggagctgcgagaggtcggc
gcgttgtgtaaggtgtcagcggagacgacggcggcggcgacgacgacgacggcgggggcg
tggcacgccggagactcccgggttcacgaccagccgggatggcactccgagcggagccgc
ggagggaaaccgggggccgccacggcgtccgtcatcgtccggccctctacgtgcataaag
tacgatggctcgccgggccccaggaccgccccgccggccaaggagcccgcgtcggggagg
ctgttcccggcgggcaggacccagacggactgcctgaagccggccgaagaaagggagaga
ggcagggagtctggagggagggtgatcctgcccaacactaacctggatgagtctggctgc
atgcagcagtacaggaggaccctgatgagagcctccccggctgctgtcccagcgggtgcc
gctctcccggccgctcccgaccccgcgtgcaatatgaggagcgacgttcccacggcaacc
cccgccgcggcctcccgcggcatgccgtgtaggggtggagaagccgcctattgtgcgtcc
gacgcctccatcgccagcggcccccgggtcgggcctttccacatggggcccggggctcag
ctacaggagggctgctcctccaggacctcgtccccgagcctgcacgcccagcccggcccc
agtcccggctccagccagtcgtactcagggagcttcatccacctgaagaagcacaaggcg
gtgctggcagcccagcagtccagaggtccgggtagcgggggcgttagtggtcccgaaagc
ctgtcggaaccagccggtggtaaagctccccacagctcccctccacctccctcctcctcc
caggacccctccaccaaccctgcggtatgtaaggccagccccaatcccggccccagcccg
cttcccaacggccagccggtccagatgagccctaacccgaaccagagccagtctcagccc
aactaccacaagctgaaaaaggcgtggctcaccagacactccgaggaggacagtcaccgg
agcaccgtggccgtcatcaagacggagaagctggagaaaccgccggcctcggtcagcccc
gccgtgtccgagatggagatgatcaagccgtgcaccgtcgccctgatcgcctccacctcc
ggcgatgtggagatgaagatggaggaggtcaagggtcaggaggacaagacgaccccggag
gacaggaagacgcggcgggggaacaagaggacctacgaccacgactctgccacggagagc
ggggaggactcggacgccagcgagagcagcaagcaggagcagcgggccaagagacagccc
aagcccacctacaagaagaaacagaacgacctgcagaagaggaaaggggagggagagaag
gacgaagatgacatgaagcccaatgggatcttcaggagtgccagagagaagactaagctg
aaactggccagcagcaatggtatccctcgctcagtgctaagagactggaggaaggtgaag
aagttgaagcagacaggggagtccttcctgcaggatgactcatgctctgagatcggaccc
aatctgcagaagtgtcgggagtgtcgcgtggtccgcagcaagaagggggaggagccggca
cactctcctgtcttctgccgcttctactactttcgccgtctgtcctacagtaagaacggt
gtgatccgtgtggatggcttctccactccagaccagtttgatgacgaagctctgtccctc
tgggctcccgacgtggatcaggagaaccagctggacccggacagctccaagtacatcctc
tcttacatcggagacaagttctgccagatggtcaccaccgaaaacactgcagctacctgg
atcaaaaaggatgcccaggtggcgtggaagagggctgtcagaggggtgagggagatgtgc
gacgcgtgcgaagccacgttgtttaacattcactgggtctgccagaaatgtgggtttgtc
gtttgcctggactgctacaaggcaaaggagagaaagaaccccaaagacaaagagcagtac
gtctggctgaagtgtgtcaagggacagccgcacgatcacaagcacctgatgccaacacag
attattccaggaactgttctgacagagcttgtgagcgccatgcacatgttcagggagagg
tacaacatcaaggcccattgtgcttgcactgccaagcccaacacgctgctcaacaaactg
cccactaccaacggagtgtcccaggttctccagaatgtgttgaaccactgcaacaagatc
tctctgtgtaatgtgaagaccgagcctggccagttgatcccaagtcagggaaaaccagag
accaacggcggctccagccccacgtccgacacctcctccgaccccaagctgacccctccg
gagtcccagagtcctctccacttcctagctgacttggcagaacagaagtcacgggaggag
aaaaaagaaaacaagaagtctccggtggggaagacggtgaaggaggaggatcaccatgat
gtcagcgccctggagtctctgcactgtaaggcttccagtctggtgtcaaacagctcagaa
cagggctccacgttacgggacctcctcactaccactgccggcaaactacgcatgggctcc
accgacgccggcatcgcctttgcgcctgtgtactccaccgcaacgcagacggggaaaagt
gggcgcagcatgcccaacatcctggatgacatcatagcgtcagtggtggagaacaagatc
ccagccagtcgaggagccaagctgagcctgaagctggaggccaccgccacaaccactgcc
gaggagagggaggtgagaccggagaagacagagaggaagaggcagtctgggcccgggggt
gtgccagatgagcccctacctgccaagccccaggtggagaagaccccgccgcccctggct
gatgccccccaccactggctgtaccagcaccgcctgctctggctcaaagaccaccggcac
cctggcaaccggaagctgttcagggagtgttggagacaaggacagcctgtcctggtgtca
ggggttcataagcgtctgaatgctgctttgtggaaagcagaaagctttaatcaggagttt
gctgaccatcagggagaccttgtcaactgcaaagatggcatcatctcgaactctggcatc
aaggagttctgggacggatttgaggatctcaccaagagacccaagtctaaagatggtgaa
accctggtgtatcggctgaaggactggccgtcaggagaggaattcatggccctgatgccc
tccaggtatgatgacctgatgaggaacctgcccctaccagagtactcagaccctgagggg
aacctcaacctggcctcccatctacccagcttttttgtccgcccagatctgggtccccgt
ctatgctgtgcttacggagtggctgcctcccaggagcaggactttgggacggctaacctg
cacatggaggtgtcagacattgtctctgtcctggtctacgtgggcgttgccaaggggaat
ggagtcctgtccaagactggagtgctgaagaggctggaggaggaagatttggacgacagt
gtgaaaagaagattaaaggattccagcgagacgcctggggccttgtggcacatctacgtt
agcaaagatgtggagaaaattaaagagtttttgcacaaggttgctaaggagcagggggtg
gaggttccggcggagcatgacccaatcagagagcttggctggtacctgagcaggaagttg
cgtcagcggctgtgggaggaccacggtgtgcagggctggactgtggtccaattcctgggg
gactctgtcctcatccctgctggagccctacatcaggtgcagaaccttcacagttgtgtc
caggtgataaatgactttgtatctccggagcacgtgttccactcattcaacctgacacag
gaacttagatcctccaaagaagagttcaactatgaagataaactccaggtaaagaacatc
ttgtaccactgtgtgaaggatgcagtgacatcactgaggaggttcagccagaaggagcaa
gaggaggaggaagaggagaagaactcatga
DBGET
integrated database retrieval system
