Esox lucius (northern pike): 105025832
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Entry
105025832 CDS
T04894
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
els
Esox lucius (northern pike)
Pathway
els03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105025832 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105025832 (rbm22)
Spliceosome [BR:
els03041
]
Complex B
Other components
Prp19-related factors
105025832 (rbm22)
Complex C
105025832 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf_CCCH_4
Torus
RRM_occluded
zf-CCCH_2
Nup35_RRM_2
zf-CCCH
zf-CCCH_4
RRM_3
Motif
Other DBs
NCBI-GeneID:
105025832
NCBI-ProteinID:
XP_010895121
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Position
LG04:12268598..12276629
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AA seq
423 aa
AA seq
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MATSLGANTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLDIKDDVPKSDVNKEYYTQN
MEREIGNSDGTRPVGILGKAPSSSEMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDTPEDKTITTLYVGGLG
DTISDAELRNHFYQFGEIRTTTIVQRQQCAFIQFATRQAAELAAEKSFNKLIINGRRLTV
KWGRSQAARGKEAIKDGVSEMGTRLDPVPGLPGALPPPPALEEDTPANYFNLEAGTSPNV
MNISLPPPPGINPLPPGFGPPMFHMGSMGPPPPPPMGMRPPGHIHYPSQDPQRMGAHAAR
HGD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctctaggcgctaacacatacaatcgacagaattgggaagacgcggatttc
ccaattctgtgtcagacgtgtttgggagagaacccatacatccgcatgaccaaagagaag
tatggcaaagaatgcaagatttgtgctcgtccattcactgtgttccgttggtgtccggga
acgaggatgcgcttcaagaagacagaggtgtgtcagacctgcagcaaaatgaagaacgtc
tgccagacttgtctgctggacctggagtatggtttgccaatccaggtcagagacaccggg
ctggacatcaaggatgacgtgcccaagtctgacgtgaacaaggagtattacacacagaac
atggagagagaaatcgggaactctgacggaacgcggccagtgggaatcctgggtaaggct
cccagctcaagtgaaatgctgctgaagctggcgcgcaccacgccctactacaagaggaac
agacctcatatctgctccttctgggtgaagggagagtgcaagagaggagaggagtgtccc
tacaggcatgagaagcccacagaccccgacgatcctttggcagaccagaacattaaggat
cgttactatggtatcaatgacccagtggctgacaagctgctgaaacgggcctccaccatg
cccagactggacacgcctgaggacaagaccatcaccactctctacgtaggggggctggga
gataccatctcagacgcagagctcaggaatcacttctatcagtttggggagatccgtacc
accaccattgtccagaggcagcagtgtgccttcatccagtttgccacacgacaggctgcc
gagcttgctgctgagaagtccttcaacaagctcatcatcaacggacgccggctcactgtc
aagtggggcaggtctcaggctgcccgggggaaggaggccattaaggacggtgtcagtgag
atgggaacccgactggaccccgtaccaggtctgcccggagctctccccccacctcctgct
ttggaggaggacactcctgctaactacttcaacctggaggcaggcacctctcccaatgtc
atgaacatctccctaccccctccgcctggcatcaacccattacctccaggttttggtcct
cctatgttccacatgggttcgatgggtccccctcctccccctccaatgggcatgagaccc
ccaggacacatccactacccttcccaggacccccagcgtatgggagcccatgctgcgcgt
catggcgactag
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