Esox lucius (northern pike): 105027796
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Entry
105027796 CDS
T04894
Symbol
synpo
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
els
Esox lucius (northern pike)
Pathway
els04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105027796 (synpo)
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
105027796
NCBI-ProteinID:
XP_010898380
UniProt:
A0A3P8YY65
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Position
LG04:8512344..8538717
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AA seq
1118 aa
AA seq
DB search
MERGHMSMRRGVSLSPAGVRKPIQGGDTETLNRQNDSSWERRDYRGVKGQVTSASTNQLG
RKTNLTRSASLSEKELKEARVRSHIIATQLTVPSSGSNSRGVQLFNRRKQRVNAFTLESC
GEQPKEEEASPVENDREKTEDGDARNNNLIWREERGGASETDRELNSKNNCRTKPPTWLF
TSGGRTESEVTVGDIMEDPSNEHIYEEVDVIEERHFQPVNVREEEEREREREREVVYDDV
EGEVKDEIIPVIDNNTCAVRKEAGANAGSYNEPAAPPVTRNGFHSTQTACQEIQNGERVS
VSLSGQTPAILNRTARPFFSPPNVQTTAPGSNSIPPAPSYPTPTFPPASSYSTPSCQAFN
TASRPVTFSSPPPPPSYPMPPLPGFPGHPPSQALSCPNPMSPVTSPQAYLVPQYSPAPPV
TLGSQYLHPNPTVSQHVPPPTYPRPNTFIPYTPQSIGQQQQPIKTGILEEGAAAIRRSST
ARKSMFTFKEKPIIAPNPELLSLVQGNDERKKHGPHSVADQAPEEELLALGAEASNFLAK
EEVRAEAAKVPEWSSCLKSSRTREPRGQHQPEQTLTNASGKGAELFAKRQSRMEKYVVEN
SSGAGQMRPLSPTASLPPSWVYPSNMPGRVKAIANNADLSAQLARPLQTAQPLKRRPSQQ
APTPDPVPEEPPLENGCTKIEMDLSRHRPYQLNPSLFIFSPVKDPTSTLPRGAPPPPKPL
VSSDMYSRQATSNPSSHNSNSLPRFRTSQSPSSQPAPRGVGGGDYYPPRQGGTAGPSDPR
ITSPVSAFSPEKVVSPKPGVQAPRPTFSAKRAGIKPQMESPPTIASSPARTPQFSRHFNS
PEGNPSSVVWSPTPQSIVSSSRSPRPAAAATNTAATSSVAPAWETRCQSPGVVNQTTKPF
STASLPRTRSSSTVTSPISPYGSRCQSPSPNQTTKPFSATAMSSTARPSHPGSVNSPLSP
SPLSPPWGSRCQSPIVSPGTGDSKANHRLLAKNIINAAKRKNSPSPGALSGHNTPISPVG
GSSAAQQQRSSKPPFSPFQSRALGCRSPPFASPPATPTGMIRSPVRLYNTRSLTDSDASV
ESEDSGLRSPGLHRSHNTCPRGWGGSLRVKRGSVGADL
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggtcatatgtccatgaggaggggtgtcagcttgagcccagcaggggtgagg
aagccaattcagggcggagacacggaaacccttaacagacagaatgattcctcttgggag
aggagggactacagaggggtcaaaggacaggtaacctcagcctcaaccaatcaactgggt
cggaaaaccaacctgactcgtagtgccagcctatcagagaaggagttgaaggaggcgagg
gtgaggtcacacatcattgcgactcagctgaccgtcccatcgtccggttccaactcacgc
ggcgtccagctcttcaaccgccgcaaacagcgggtcaacgccttcacgctcgagagctgt
ggggagcaaccaaaggaggaggaggccagccctgtggagaacgacagagagaagacagag
gacggagacgccaggaacaacaacctgatatggagagaagagaggggaggggccagtgag
acggacagagagctgaactctaaaaacaactgcaggactaaaccaccaacctggttgttt
acttctggaggccgaacagaaagtgaggtcacagttggggacatcatggaggatcccagt
aacgagcacatctacgaggaagtggatgtgatagaggagagacatttccagcccgtgaat
gtgagagaagaggaggagagggagagggagagggaaagagaggtggtatatgatgatgta
gaaggcgaagtgaaggatgagattatcccagtaatagacaacaacacctgtgcggtcaga
aaggaagcgggggcaaatgcggggtcatacaatgagcccgcagctccccctgtgacccgc
aatggcttccacagcacccagactgcgtgtcaagagatccaaaatggcgagcgagtttct
gtgtccctgtccggacagacccccgccattctcaaccgaacagccagacccttcttttct
ccacccaatgtccagaccacagccccagggagtaacagcattcccccagccccctcctac
cccactcccacatttcctcctgcttcttcctactctaccccctcttgccaagctttcaac
actgcctctcgtcctgtcaccttctcctctcctccccctcctccctcataccccatgcct
cctctcccaggcttccctggccatcctccttcccaggctctctcctgtcccaaccccatg
tctcctgtcacgtctcctcaggcctacctcgtaccccagtacagtcctgcccctccagtt
accctggggtcccagtacctacaccccaacccaacagtctcccaacacgtcccccctcca
acctaccccagacccaacaccttcattccctacacccctcagtcaattggccaacagcag
cagccaatcaagactggcatcctggaggaaggggcagcagccatcaggcggtcgtcgaca
gcaagaaagtccatgttcaccttcaaagagaaacccatcatagcacctaaccctgagctg
ctttcccttgtccaggggaatgacgagagaaagaaacacggcccccactccgtcgctgat
caggccccagaggaagaactcttggctctcggggcagaggcctcaaacttcctagccaag
gaggaggttagggcagaggccgccaaagtgccggagtggtcctcctgcctcaagagctcc
aggaccagggaacctagaggccagcaccagccagagcagacactgacaaacgcatccggc
aagggggccgagctgttcgccaagcgccagtctcgcatggaaaagtacgtagtggagaat
tcctctggcgctggccagatgaggcccctgtctcccacagcgtctctgcctccatcatgg
gtctacccatccaacatgcccggccgggtcaaagccatcgctaacaacgctgatctcagc
gcccagctggcccggcccttacaaactgctcaaccacttaaaagacgccccagccagcag
gctccaaccccagatccagtcccagaggagccgcctctggagaacggctgcaccaagata
gagatggatctctccaggcaccggccttaccagctcaacccctccctgttcatcttcagc
cctgtgaaggaccctaccagcactctgccacggggggccccaccaccacctaaacccctg
gtctccagtgacatgtactccagacaggccacctcaaacccttcctcgcacaactccaac
agcctgccccgcttcaggacgagccagtcgccctcatctcaacccgcaccgcgaggggtc
ggcggtggggattattaccctccacgccaagggggcactgccgggccaagtgacccccgg
atcacctcgcccgtctccgccttctctccggagaaagtggtctctccaaagccaggcgtc
caggcacctcggcccaccttctctgccaagagggctgggattaaaccgcagatggagtcc
cctccaaccatcgcctcttctccagccaggacaccccagttcagccgtcatttcaacagc
ccagaaggaaacccctccagtgtcgtctggtcccccacccctcagtcaatagtatcctct
tccaggtcccctcgcccagccgccgccgcgaccaacaccgcagccacctcctctgtcgcc
ccggcttgggagacacggtgccagtccccaggtgtcgtcaaccagaccaccaagcccttc
tccacagcttctttacccagaacaaggtcatcctctactgtcacctcacctatatctccc
tatggctcccggtgccagtcccccagtcccaaccagaccaccaagcccttctctgccacc
gccatgtcttccaccgccagaccctcgcacccaggctccgtcaattcacccctctcccct
tctcccctgtcccctccctggggttccagatgccagtcccccattgtcagccccggcaca
ggcgattctaaggccaaccaccgcctattggccaagaacatcatcaatgcggccaaacgt
aaaaacagcccgtcccctggcgccctgagtgggcacaacactcccatctccccggtcggc
ggcagctcggctgcacagcaacagcggagctctaagccccctttcagccccttccagtcc
agggccctgggatgccggtctccccccttcgccagcccccctgccactccgacggggatg
atccgttctccggtgaggctctacaacaccaggtccctcacggactcagacgcatcggtg
gagtctgaggactctggcctgaggtcgcctggcctccatcgttcccataacacctgcccc
cggggctggggcggcagtttgcgggtgaagaggggcagtgtcggcgccgacctgtag
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