Esox lucius (northern pike): 105029968
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Entry
105029968 CDS
T04894
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
els
Esox lucius (northern pike)
Pathway
els03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105029968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
els03036
]
105029968
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105029968
Chromatin remodeling factors
NuRD complex
105029968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
ResIII
HDA2-3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
105029968
NCBI-ProteinID:
XP_028971191
LinkDB
All DBs
Position
LG20:complement(19795395..19824714)
Genome browser
AA seq
1971 aa
AA seq
DB search
MSASESEREDMGPMALAHDEEPEEAMSDIEVPTKSKKKKKAKKSRESRSSKRQRPIREDV
PVSSPEPLLAVEPLARDEEEGGGRARSESEGSDYAPRGKKKKRSSSSKEKKKGGGMSGER
EKGGSSSGSKSKRKEPELDKDEDDDDDDDDDSQEPKSSTQLLEDWGMKDIDHVFTQEDYI
TITNYKAFSQFVRPLIAAKNPKIAVSKMMTLMMAKWREFSTNNPLKGCASANAALAAANV
AAAVESMVVAGAEGDTGAGAAKDSPPPVSAPTAVAVPPVPPLRKAKTKEGKGPNARRRSK
PTAKPAPKPKAKKVAPLKIKLGGFNSKRKRSSSEEDDPEVESDFDDGTFDVSDGSNGNSS
RSKKKVKISKKKKRVEEDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEK
APEGKWSCPHCEKEGIQWEAKEDLSDGEVEDEEVGRDEGGVEEEDDHHIEFCRVCKDGGE
LLCCDTCPSSYHIHCLNPPLPEIPNGEWICPRCMCPGMKGKVQKILTWKWGEPPPPTPVP
RPPDLPADAPDPPPMVGRPERQFFVKWCNMSYWHCSWVQELQLELNCQVMFRNYQRKTDM
DEPPPVDFGGEGDDDKSTKRKNKDPLYVHMEEEFYRYGVKMEWLMIHRILNHSVDKKSNV
HYLIKWRDLAYDQASWESEEMDIPEYDLYKQTYWNHRELMMGDEGRPGKKLKKVAKVKKI
EKPPANPVVDPTIKFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMGLGK
TVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIR
ENEFSFEGNAIRGGKKASKMKKDSSVKFHVLLTSYELITIDQAVLGSIDWACLVVDEAHR
LKNNQSKFFRILNNYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADI
AKEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKFILTRNFEAL
NTRGGGNQVSLLNVVMDLKKCCNHPYLFPGAAMEAPKIPNGMYEGSALTRASGKLTLLQK
MMVKLKEGGHRVLVFSQMTKMLDLLEDFLENEGYKYERIDGSVTGGMRQEAIDRFNAPAA
PQFAFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTK
ASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEIGEGDSK
EDDSQVIHYDDKAIDRLLDRNQEAESTEDTEIQSMNEYLSSFKVAQYVVKDEEEEEEEVQ
REVIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRTRKPVNYNDGSQEERGSRRAD
WQEDQSDNNSDYSVASEEGDEDFDERSEANSRRPNRKGLRNERDKPLPPLLARVGGNIEV
LGFNARQRKAFLNAVMRYGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGAD
GAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHVNGQWSMPWMMELEENKRLAAI
AAGEDTKTPSTGTPADTQPNTPVPEDVNKTDDAGKEMDVQKEVESEKGPGKTEDPEIIEI
PDEMETASEKKETESPSTEEEKEKVKDKETEEKEPKGTSNEKEVKGEMSEATAGTEEAKL
KAEDSKEEMMDTSPSVEDKKEQKEEKDVVKTEESAKLQNGENAKGVIAVSSAMVVNVSEE
KKKATKQRFMFNIADGGFTELHSLWQNEERAATVTKKTFEIWHRRHDYWLLAGIIQHGYA
RWQDVQNDVKYAILNEPFKGEMSRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNM
SEDPAHPSMALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSDMKAD
VTRLPATIARIPPVAVRLQMSERNILSRLASRGSEVTGQSQSQTTQMQVPR
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaagcgagagcgagagggaagacatgggacctatggcactagcacatgacgag
gaaccagaagaggctatgtctgatattgaggtccccaccaagtcaaagaagaagaagaaa
gccaagaaaagccgtgagagcaggagcagcaaaagacagaggccaatcagagaggatgtg
cctgtcagttctccagaaccgctcttggcagtagagcctctagcgagagatgaggaagag
ggcggaggaagagctaggtcagaaagtgagggaagtgattatgccccaaggggaaagaag
aagaagcgctccagctcctccaaagagaagaagaagggaggaggtatgagtggagagaga
gagaaaggaggctcatcatccggctccaagagtaaacggaaagaaccagaactagacaaa
gatgaagatgatgatgatgatgatgacgacgatagccaggaacccaagagctccacccaa
ctgctggaggactggggcatgaaggacatcgaccatgtcttcactcaggaggactacatc
accatcaccaactacaaggccttcagccagtttgtcagacccttaattgcagccaaaaat
cccaagatcgctgtgtctaagatgatgacactgatgatggccaagtggcgagagttcagc
accaacaaccctctcaagggctgtgccagtgccaatgcagccctggcagctgccaacgtg
gctgctgctgtggagagcatggtggtggcaggggcagagggggataccggggccggtgcc
gctaaagactcacctccccctgtttctgctcccacggctgtggccgttccgcctgtaccc
ccactccgcaaggccaagaccaaagagggcaaaggccccaatgctcgcaggaggtccaag
cccaccgctaagccagcccccaagcccaaagccaagaaggtggctccactcaagatcaag
ctgggaggcttcaacagcaagaggaagcgatcctcgagtgaggaagatgatcccgaagtg
gagagtgacttcgacgatgggacctttgacgtgtcggacggctccaacggcaacagcagc
cgctccaagaagaaggtcaagatctccaagaagaagaagagagtggaggaggatggggat
ggttatgagactgaccaccaggactactgtgaggtgtgccagcaggggggggagatcatc
ctgtgtgacacctgcccccgggcctaccacatggtctgtctggaccccgacatggagaag
gctcccgagggcaagtggagctgcccccactgtgagaaagaagggattcagtgggaggcc
aaagaggatctgtctgatggggaggtggaagatgaggaggtcgggcgggatgagggaggg
gtggaggaggaggatgaccaccacattgagttctgccgggtgtgtaaggacggaggagag
ctgctgtgctgtgacacttgtccctcctcctaccacatccactgtctcaacccccccctc
ccggagatccccaacggggagtggatctgtcctcggtgcatgtgccctggcatgaagggt
aaagtccagaagattctgacctggaagtggggtgagccgccgccccccacccctgtgccc
cgccccccggacctcccggcagatgccccagacccccccccaatggtcggccgtccagag
aggcagttctttgtgaagtggtgcaacatgtcctactggcactgctcctgggtacaggag
ctacagcttgagctgaactgtcaagtgatgttccgtaactaccagaggaagacggacatg
gatgaacccccaccggtggattttggaggggaaggggatgatgacaagagcaccaagagg
aagaacaaagaccccctgtatgtacacatggaggaggagttctaccgctatggagtcaag
atggagtggctcatgattcatcgcatcctcaaccacagtgttgataagaagagcaatgtg
cactacctgatcaagtggagggatcttgcatacgaccaggcctcctgggagagtgaggag
atggacatccctgagtatgacctgtacaagcagacctactggaaccacagagaattgatg
atgggagatgagggcaggcctggtaagaagctgaaaaaggtggctaaagtcaagaagatt
gagaagccccctgctaaccccgtggtggatcccaccataaagtttgaccgacagccggac
tacctggactctactgggggcacgctgcacccctaccagctagaagggctcaactggctc
cgtttctcctgggctcaggccactgacactattctggccgatgagatgggtctgggcaag
actgtccagactgcagtgttcctctactcactctacaaagagggtcattccaagggtccg
ttcctggtgagcgctcccttgtccaccatcatcaactgggagagagagtttgagatgtgg
gcaccagacatgtatgtggtgacctatgtcggagacaaggacagcagagctgtgatcaga
gagaacgagttctccttcgagggcaacgccatccgtgggggcaaaaaggcttctaagatg
aagaaagactcatcagtgaagttccatgtgctgctgacatcctatgagttgatcaccata
gaccaggcggtgctgggctcaatagactgggcctgtctggtcgtggacgaggcccacaga
ctgaagaacaaccagtcaaagttcttcaggatcctgaataactaccccctccaacacaag
ctgctgttgaccggtacacctctacaaaacaacctggaagaactcttccacctgcttaac
ttcctcaccccagagagattcaataacttggagggtttcctggaggagtttgctgacatc
gccaaagaggaccagattaagaagctccatgacatgctgggaccacacatgctcaggaga
ctaaaggctgacgtcttcaaacacatgccctccaagactgagctcatcgtacgagtggaa
ctcagccccatgcagaagaagtactacaagttcatcttgacccgtaactttgaggccctg
aacacccgcggaggaggaaaccaagtgtccctgctcaacgtggtcatggacctcaagaag
tgttgtaatcacccctacctctttcctggggcggcaatggaggcgccaaagattccaaat
ggaatgtacgagggcagcgccctcacgagggcttctgggaaactgacgttgctgcagaag
atgatggttaaactcaaggagggaggacaccgagtgctcgtcttctctcagatgaccaag
atgttggacttgctggaggacttcctggagaatgaaggttataaatatgagaggattgat
ggcagcgtaacggggggcatgagacaggaggccatcgaccgattcaatgctcctgcggct
cctcagtttgcctttcttctgtctacaagagcaggaggtttgggcattaatctggcaacc
gctgacactgttatcatctatgattctgactggaacccccacaatgacattcaggcgttc
agcagggctcacaggattggccagaacaagaaggtgatgatctatcgctttgttacgaag
gcgtctgtggaggagaggatcactcaggtggctaagaagaagatgatgttgacccatctg
gtggtgcgccctggactggggagtaagaccggctccatgtccaaacaggagctggatgac
atcctcaagtttggcacagaggagctgttcaaggacgagatcggagagggggacagcaag
gaggatgacagccaggtgatccactatgacgacaaggccattgacagactgctggaccgg
aaccaggaggccgaatccactgaggacacagagatccagagcatgaacgagtacctcagc
tccttcaaagtggcacaatacgttgtaaaggacgaggaagaggaggaggaggaggttcag
cgggaagtgattaaacaggaggagtctgtggacccagattactgggagaagctcctcagg
caccactacgagcagcagcaggaggacctggcccgtaacctgggcaagggcaagaggacc
cgcaagcctgtcaactacaacgacggctcccaggaggaacgaggtagtagacgggcagat
tggcaggaggatcagtctgacaacaactcagattactctgtggcttcagaggagggagat
gaggactttgatgagcgttcagaagccaactcccgcaggccgaatcgcaaggggctgagg
aacgaacgggacaaaccactgccccccctgctggccagagtgggaggaaacatcgaggtg
ttgggtttcaatgctcgtcagaggaaggccttcctgaatgcagtgatgcgttatgggatg
cctccccaggatgccttcaccacccagtggctcgtcagggacctcagggggaagtccgag
aaagagttcaaggcctacgtctccctcttcatgcgtcatctctgtgagcctggggctgat
ggcgcagagacctttgctgatggagttccgcgggaggggttgtcacgacaacacgtcctt
acacgcattggtgtgatgtcgttaatcaggaagaaagtgcaggagtttgagcatgtgaac
ggtcagtggtccatgccatggatgatggagctggaggagaacaagaggctggcggccatc
gctgcaggggaggacacgaaaacaccctcaacaggaacccctgctgacacacagcccaac
acccctgtcccagaggatgtcaataagactgacgatgctgggaaggagatggatgtccag
aaggaagtagagtcagaaaagggtcctggcaagaccgaagacccagagattattgaaatc
ccagatgagatggaaacagcatctgaaaagaaagagacagagtccccctcgacagaagag
gagaaagaaaaagtaaaggacaaagagacagaagagaaggaacctaagggaacctctaat
gagaaagaggtcaagggtgaaatgtcagaggccaccgctgggacagaagaggccaaacta
aaagctgaggacagcaaggaggagatgatggacaccagcccctctgtggaggacaagaaa
gagcaaaaggaagagaaagatgttgtgaagacggaggagtctgccaagctgcagaatgga
gagaatgctaaaggagtgatagcagtgtcttcagcgatggtagttaatgtgagtgaggag
aagaagaaagctaccaaacagaggttcatgttcaacattgcagatggaggattcacagag
ctccactccctgtggcagaacgaggagagggcagccacagtcaccaagaaaacatttgag
atctggcaccgtcgccatgactactggcttcttgcaggcatcattcaacacgggtacgct
cgctggcaggatgtgcagaacgacgtcaagtatgccatcctcaacgaaccatttaaagga
gagatgagccgtgggaacttcctggagattaaaaacaagttcctggccagaaggtttaag
ctgttggagcaggcattggtgattgaggagcagcttcgccgggcggcctacctcaacatg
tctgaggacccagcccacccctccatggccctgaacacgcgcttcagcgaggtggagtgc
ctggccgagtcccaccaacacctcagcaaggagtccatgtcagggaacaaacccgccaac
gccgtacttcacaaagttctcaaacagctagaggagcttctcagtgacatgaaggccgac
gtcacacgtctcccagctacaatcgccaggataccacctgtcgctgtacggctgcagatg
tcagagaggaacatactcagccgattggctagccggggttcagaggtcactggccagagc
caatcacagacaacgcagatgcaggtgccgcgctga
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