Esox lucius (northern pike): 105030643
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Entry
105030643 CDS
T04894
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
els03400
]
105030643 (smc6)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
105030643 (smc6)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
Crescentin
Tropomyosin
DUF1664
Tup_N
AAA_29
UvrA_DNA-bind
DUF6815
AAA_13
Fez1
ATG16
Motif
Other DBs
NCBI-GeneID:
105030643
NCBI-ProteinID:
XP_010902931
UniProt:
A0A3P9ACJ9
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Position
LG18:complement(22342925..22362289)
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AA seq
1078 aa
AA seq
DB search
MSKRKSNSVGRSPPKRARPTEDCDDDDDDDNEVGPSQPPLPSASQMQSSGEVGIVESISL
KNFMCHSMLGPFTFGPNVNFVVGNNGSGKSAVLTALMVGLGGKATTTNRGSSLKGFVKEG
ESSADVSITLRNRGKDAYKPELFGQAIIVDLKINREGLRTYKLKSQAGQLVSGKKEELSA
ILDHFNIQVDNPVSMLTQEMSKHFLHSKGEGDKYKFFMKATQLEQMKEDYSYIKLTKGLT
ENNVIKHEECLEQLKKKYLEKEERFKSLSSLDEMHSKLEELKNQMAWALVSEMEKEVKPI
KEKLQSEERATVKYDDKVEEWTAKVVEAERKYKAIREQLEALTLRVQLLQPECATLKNEA
QSRNKAFNTAQANLHRFKTNLRDLEKDKDQLSRRIDELKLSINQTSGAESQVRAEQMERL
QRDLDALNFKDDTLGQQIEQFQSAVAQAKDELEKIRREKKDQEGSMNAIKRKIENMEGSR
SDRLRRFGENMPALLADIEDAHRKGQFRKKPVGPLGYCIRLNDHEQAQAVECCLGALMVA
FTCDNHDDEKQLQRLMRDRFQPGKRPQIITSPFFNRVHDTSQRSVYHSNYPSVLQSLEIE
DPVVANCLIDQRGIECILLIKDKTECRRVMNGRQPPRNCRMAFTKEGDQCYTDRYYSSDQ
RRYHYLSKDVEDEIRQLQEELHNKRSHLEQQLRRVQQNISKNEGLLNTVYENRKKVKDDI
MKLQQEISELQNVEEPQSEDLNPLEEELEEINCKISATRVDCEEAQGKMAQLKASWEEAE
QRYRQHKESISTLAEEADPIKEELSKTDQEVEKSKHHKKHYEEKRKTHINTIKAIKACLQ
LKEQELTTSVAKATEICPERSDVRRAARSLDSEITRLKQKISTQQDQQGDREEIIRQYQE
ALQNYNNINQQVKGLKRFIVLLSKIMDDRHQAYTELRRLLSLRCKMYFDSMLSQRGYMGK
MIFEHKNETLSISVQPGLGDKAALSDMRSLSGGERSFSTVCFVLSLWAIAEAPFRALDEF
DVYMDMVNRRISMDMMLKIAASQRYRQFIFLTPQSMSSLPVNNLIRILRLDDPDRGGK
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagaaagagtaactcagttggaagaagcccaccgaaaagagccagacccaca
gaggactgtgatgacgacgacgatgatgataatgaagtgggtcccagccaacccccgttg
ccatcagcttcacagatgcagtccagtggagaggtgggcatagtggagagcatctccctg
aagaacttcatgtgccactctatgctgggaccatttacgtttgggcccaatgtcaacttt
gtcgtcggcaacaatggaagtgggaagagtgctgtcctcacagctcttatggttggcctg
ggagggaaagctaccaccacaaacagagggtcctccctgaagggatttgttaaggaagga
gagagctcggctgacgtctccataactctgcgtaacaggggcaaggatgcctacaagcca
gagctgttcggccaggccatcattgtcgacctaaagataaaccgtgagggcctaaggacc
tacaagctcaagagccaagctggtcagctggtgtcagggaagaaggaggaactttcagcc
atcctggatcactttaacatccaggtggacaaccctgtgtctatgcttacccaagagatg
agcaagcactttctgcactccaaaggagaaggggacaagtacaagttctttatgaaagcc
acgcagcttgagcagatgaaagaggattatagttacatcaaattgacaaaaggtctgact
gaaaacaatgtgattaaacacgaggagtgtttagagcaactaaaaaagaagtatctggag
aaggaggaacggtttaaaagcctgtcctcgctagacgagatgcacagtaaactagaggag
ctgaagaatcagatggcttgggctctggtgtctgaaatggagaaagaggtgaagccgatc
aaagaaaaacttcaatccgaggagcgggccactgttaaatatgacgataaagtagaggag
tggacggccaaggtggtggaggcagagaggaagtacaaggcaattcgggagcagctggag
gccctcactctgagggttcaactgctgcagccagagtgtgccacactgaagaacgaggct
cagagcagaaacaaagcgtttaacacagctcaggccaacttacacagattcaaaaccaac
cttagagacctggagaaggacaaggatcagctctccaggagaattgatgagctcaagttg
agcatcaaccagacgtctggtgctgagagccaggtgcgtgctgagcaaatggagaggctg
cagagagatctggacgctctgaacttcaaggacgacaccctgggtcagcagattgagcag
ttccagtcggctgtggcccaggccaaggatgaactggagaagataaggcgtgaaaagaag
gaccaggaggggtcgatgaacgccatcaaaaggaaaattgagaatatggagggcagtcgc
tccgaccgcctgcggcgttttggggagaacatgcctgccctgctcgccgacattgaggat
gcccacagaaagggccagttcaggaagaaaccggtggggccgctggggtactgtatccgt
ctgaatgaccacgagcaggcccaggcagtggagtgttgtctgggggccctgatggtggcc
ttcacctgtgacaaccacgatgacgagaagcagctgcagagactcatgagagaccgcttt
cagccaggaaaaagaccccagattattaccagcccgttcttcaacagagttcacgacaca
agtcagaggtctgtataccattccaactacccatcagtcttgcagtctctggagattgag
gatccagtggtggccaactgtctgattgaccagagaggcattgaatgcattctgctcatc
aaggataagacagaatgtcgcagagtgatgaatggaaggcagccacctaggaactgccgc
atggcgttcaccaaagaaggagaccagtgttacaccgaccgctactactccagcgaccag
cgaaggtaccactacctcagcaaagatgtggaggacgagatcaggcagttgcaggaggag
ctgcacaacaagaggtctcatttggagcagcagttgcgaagggtgcagcagaacataagc
aagaatgaaggtcttctaaatacggtttatgaaaacaggaaaaaagtcaaggatgatatc
atgaagctgcagcaggagatcagtgagttgcagaatgttgaggagccccagtctgaagac
ctcaaccctctggaggaggagcttgaagagatcaactgtaagatctcagccacgcgtgtg
gattgtgaagaagcccaggggaagatggcccagctgaaggcatcctgggaggaggcggag
cagaggtaccgccagcacaaagagtccattagcacattagcagaggaggccgatcccatt
aaggaagagctgagtaagactgaccaggaagtggaaaaaagcaaacaccataaaaaacat
tatgaggagaaacgcaagacccacatcaacaccatcaaggccatcaaggcctgcctgcag
ctcaaggagcaggagctcactacgtctgtagcgaaggctacagagatctgcccagaacgc
tccgacgtgcgtcgggcggccaggagtctggacagcgagataacccgtctaaagcagaag
ataagcacacagcaggaccagcagggagacagagaagagatcatcaggcagtaccaagag
gccctgcaaaactacaataacattaaccagcaggtgaagggcctcaagcgcttcatcgtc
ctcctgtcaaagatcatggatgatagacaccaggcctacacggagctgaggaggcttctg
tcattacgctgcaagatgtactttgactccatgctgtcgcagagaggctacatgggaaag
atgatattcgagcacaagaatgaaaccctgtccatctccgtccagccaggtctgggggat
aaggctgcactgagcgacatgcgctctctgtctggaggagagcgctcattctccactgtc
tgcttcgttctctctctctgggccattgccgaggctccctttcgcgccttggatgagttt
gatgtatacatggacatggtgaaccgaaggatatcaatggacatgatgttgaagatcgct
gcaagccaacgttaccgccagttcatattcctcaccccacagagcatgagttctctccca
gtcaacaacctgattcggatcctgcgtcttgatgatccagaccgtggcggaaaatag
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