Escherichia coli O157 H7 Xuzhou21 (EHEC): CDCO157_3355
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Entry
CDCO157_3355 CDS
T02122
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
elx
Escherichia coli O157:H7 Xuzhou21 (EHEC)
Pathway
elx02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
elx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
CDCO157_3355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elx03021
]
CDCO157_3355
Transcription machinery [BR:
elx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CDCO157_3355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AFJ30412
LinkDB
All DBs
Position
complement(3514752..3515744)
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AA seq
330 aa
AA seq
DB search
MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLGLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQTQGLNIEALFRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaatacgctgaaagttcatgatttaaatgaagatgcggaatttgatgagaac
ggagttgaggtttttgacgaaaaggccttagtagaagaggaacccagtgataacgatttg
gccgaagaggaactgttatcgcagggagccacacagcgtgtgttggacgcgactcagctt
taccttggtgagattggttattcaccactgttaacggccgaagaagaagtttattttgcg
cgtcgcgcactgcgtggagatgtcgcctctcgccgccggatgatcgagagtaacttgcgt
ctggtggtaaaaattgcccgccgttatggcaatcgtggtctggcgttgctgggccttatc
gaagagggcaacctggggctgatccgtgcggtagagaagtttgacccggaacgtggtttc
cgcttctcaacatacgcaacctggtggattcgccagacgattgaacgggcgattatgaac
caaacccgtactattcgtttgccgattcacatcgtaaaggagctgaacgtttacctgcga
acagcacgtgagttgtcccataagctggaccatgaaccaagtgcggaagagatcgcagag
caactggataagccagttgatgacgtcagccgtatgcttcgtcttaacgagcgcattacc
tcggtagacaccccgctgggtggtgattccgaaaaagcgttgctggacatcctggccgat
gaaaaagagaacggtccggaagataccacgcaagatgacgatatgaagcagagcatcgtc
aaatggctgttcgagctgaacgccaaacagcgtgaagtactggcacgtcgattcggtttg
ctggggtacgaagcggcaacactggaagatgtaggtcgtgaaattggcctcacccgtgaa
cgtgttcgccagattcaggttgaaggcctgcgccgtttgcgcgaaatcctgcaaacgcag
gggctgaatatcgaagcgctgttccgcgagtaa
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