Escherichia coli O157 H7 Xuzhou21 (EHEC): CDCO157_4664
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Entry
CDCO157_4664 CDS
T02122
Name
(GenBank) transcriptional regulator HU subunit alpha
KO
K05787
DNA-binding protein HU-alpha
Organism
elx
Escherichia coli O157:H7 Xuzhou21 (EHEC)
Brite
KEGG Orthology (KO) [BR:
elx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elx03032
]
CDCO157_4664
03036 Chromosome and associated proteins [BR:
elx03036
]
CDCO157_4664
03400 DNA repair and recombination proteins [BR:
elx03400
]
CDCO157_4664
DNA replication proteins [BR:
elx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CDCO157_4664
Chromosome and associated proteins [BR:
elx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CDCO157_4664
DNA repair and recombination proteins [BR:
elx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CDCO157_4664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AFJ31714
LinkDB
All DBs
Position
4935845..4936117
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG
RNPQTGKEIKIAAANVPAFVSGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactcaactgattgatgtaattgcagagaaagcagaactgtccaaaacccag
gctaaagctgctctggagtccactctggctgcaattactgagtctctgaaagaaggcgat
gctgtacaactggttggtttcggtaccttcaaagtgaaccaccgcgctgagcgtactggc
cgcaacccgcagaccggtaaagaaatcaaaattgccgcagctaacgtaccggcatttgtt
tctggcaaggcactgaaagacgcagttaagtaa
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