Epinephelus lanceolatus (giant grouper): 117247351
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Entry
117247351 CDS
T07331
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117247351 (jmjd1cb)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117247351 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
C1_2
FYVE
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
117247351
NCBI-ProteinID:
XP_033467752
LinkDB
All DBs
Position
21:3637925..3828056
Genome browser
AA seq
2905 aa
AA seq
DB search
MAVEARPELVGKRFLCVSGDEPPEIGDIGRWPWRSGVIRAVNHRDSDNPDLTVYVEFDDQ
EWEKREWVKVYEDFQLFLLEHQLVWAKRKEGAGGGGGAGAGGGAGGLLQGTKAKHIQWPA
LAFKPVVGKSLLSSVTAVEFLLDRQLDFLSDHSTFQPYQDEVDSQNPVLRDNHQLHEEVR
GWLKDQKVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEP
QNVDPSMIQMTFLDDVVHSLLKGENIGITSRRRSRSSQNNNSAHMAGGRPGGTTGNTQSH
YTRAQANSPRPIMTSSGPNPKGSQGTLAAQQQSQSQQCQQPASQSHHSPGGSGREPREQR
TSRSSRRKGSDSSVPEEDKDRREETTGRDSKSKAKQAVNKRRKGEEDEKKAGLKRLKTDM
TSDLSESSDSENPHKRTAHSSCSSSSSSSSSSSSSSSSSSSEPNSENELKTRSSDVKQSS
VSKKEEEEKPLIQGTKMNDSSSLIGRLSPWAELQAADDSKKGVAKETGNITTKEEEELVA
VTQITQSPRQQTPLMSDSVQSGSMEGNKNTVKASSRSQTPSLSHLHGGGVIDITDDAQAT
VHQESSEAVSALLASQKAESTALSPYLPLNPSPVSSPPVPPSPSPSEGGRRTDIEPPMQQ
QQGIMGSGMTAARSLGNKIEFAPSEVIRPVTSMVETVVLVEKEKTVLPHHLHHHQQQHHP
QHTQQQQHYTSIHPSIKSPSLSEETRKHPQQQPPPHKMNTVLPPDLAKSKINPNPAQLDS
LKQKPQHPNNSQSHPYPNTNPADLLKAKPHPGLLDISKPKPNTSPEVSKHKIQRYPDTSP
PPISRLSAKVETAEPPRSGFKPVPARSESGGVSTSSSSTKSPLIIDKNETFTVYRDPALV
RSDTENSVSATVSSNHVAAYLHPHLHTLHSPSPHSPCLTSTSHPHAASHLLAPPHSSALP
HPHLLPPGVLPAMPPPAASLLGGHPRLDSPSGLGHLALPHPAAAHQQQFLQGQGPHPPPL
LAQAHSGAAGLGLYPILWQYPNGTPTSYPPGLNLPPTAKWVHPDNPVAVNSDASLRRNTA
SPWLHQAAGSAGDGLGLLSHVPVRPASADAHRPPVKINTHTSPPLSKASVNAHKEDVEKK
GFVDPIRTLTLAQLKQEQTDRSRTPTGKDVHLHRLYLDPHSKARLANTQDAVQAADRASK
YKEENRQILKESIEVAPFTAKIQRSSDPGMDRDRERSRDPAFPVRIPALASPSPKASHIH
PHVIPSEKSNYFTTLSNSVVNEPPRLYPSKELSSYYEKVSGGGPGVVASVGAAVPSQGAL
PLGSYSSKASLSKPPPLIKHQPEGGEGLAGKITEQLSQQVTLVQQQHQHHTGMDRIERRS
PAISPSCSTSSSSSSAPNHHHHHHHHHHQQQQQQHQLRAMPSLHRAPVFHPPTQHALERK
EAAEREREREKERERERERAGYGGRLSPPTLTPIQPVSLAAAGSKTSAEQQKPPTLLPEL
RDVKGHGNAATVTSVASAISGEIMTSSTDGWRGGEMIRERGGSFSGEKGVLRGKPQAAMA
SVIVRPSTSIKYDSPVGANKSGAMILKELPQGRFYQSTFQGECPRLGESVREAVAGRVIQ
PNSNLDDMCVQYKKRGMQGTMGASITNSVCRTATSAFGIQSISGTVLPEQGYSGSARGEM
SAHKTGICGRVLSHSGPGEYQEGLGSRTSSPGGSLSSPSPAGTPQSSPSLTPTPSSFSGS
NQPYSSSFVHLKKHKAALAAAQSRSNFSPAPTPVTTGNCSLPVDPVEKNPIHNSPPPPSS
SQASSSSVDSSSSNSASGSTTTGKSSPLPNGQTSGSASTSSGQPNNYHKLKKAWLTRHSE
EDRNTTATVSSTSTKPEKLPSTTTSTSNATAMSEMIKPCTVNLSASTSSDVEMSKDSGGK
VERERQLEEKVGGAAAAGGGGEERKAAPSSRRGNKRTYESGSESGGDDSDASESKIEGRA
KRQPKPTYKKKQNDMAKKKGDNEKEEDDLKPNGIFRSAREKTKLKLASSNGIPRSVLKDW
RKVKKLKQTGESFLQDDSCAEIGPNLQKCRECRVVRSKKGEEPAHSPVFCRFYYFRRLSY
SKNGVIRMDGFSTPDQFDDEALALWVPGLMEESHLDQTTAKYILSFIGDKFCQMVLTENT
AATWVKKDAKLAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERRSSKD
KELYGWLKCVKGQPHDHKHLMPTQIIPGTVLTELVTAMHSLREKYNIKCHCPCTNKQNLL
SKLPATNGVSQVLQNVLNHSNKLSLVKAEPGSQQNSDQAGTKAETNGGGGGGSSPGSDAG
SAPVTPPESQSPLHFLADLAEQKSREEKKENKSVLLGKSVKEDKEGDSLEVLQQCKTTSL
VANSTEQGSTLRDLLTTTAGKLKLGSTDAGIAFAPVYSTASQTGKGGRTMPNILDDIIAS
VVENKIPASRQNITTKLSIKQEPVNPGNNNPTPAITEDAKPDRKKSAHVTAAVPEDSSSQ
YPDIPHCWLNNRRLLWLKDHRNQNNWKLFRECWKQGQPVLVSGIHKRLNGGLWKADSFNQ
EFADHQGDLLNCKDQVVSNSGIKEFWDGFEDITKRPKSKDGEPMVYRLKDWPSGEEFMAL
MPSRYDDLMKNLPLPEYSDPEGNLNLASHLPSFFVRPDLGPRLCCAYGVAASQDQDFGTA
NLHVEVSDVVSVLVYVGVAKGNGVLSKTGVLKRLEEEDLDEGVRRRLKDSSETPGALWHI
YLNKDMDKIREFLHKEQGLDISLDQDPIREQGLYLSRKQRQRLLDEHGVQGWTVVQFLGD
SVLIPAGAMHQVQNLHSCVQVINDFVSPEHVANSFHLTQELRPNKEEVNYEDKLQVKNIL
YHCVKEAVSSLKRGSSEEDDEEENS
NT seq
8718 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgaggctcggccggagctggtcgggaagcggttcctctgtgtcagcggggac
gagccgcctgaaatcggcgacatcggtcggtggccttggaggtccggggtcatacgagcc
gttaaccatcgtgacagcgacaatcccgatctgacggtatatgtggaatttgatgaccag
gagtgggagaagagagagtgggtgaaggtgtatgaggatttccagctgtttctactggag
caccagctggtctgggccaagaggaaggagggagcaggaggaggaggaggagcaggagca
ggtggaggagcaggaggcctgctgcagggaaccaaggccaaacacatacagtggcctgcc
ctggcatttaagccagtggtgggaaagagcctgttgtcatcagtaacagcagtggaattt
ttgttagaccgacagctggacttcctgtctgaccattcaaccttccaaccataccaggat
gaggtggacagtcagaacccagtattaagagacaaccatcagctccatgaagaagtgagg
ggctggctcaaagaccagaaagtacaggaaatttttatgcaaggtccctattcattgaat
ggctaccgtgtgcgtgtgtacagacaagactcggccacccagtggtttactggcatcatt
acacaccacgacctcttcagtcgaaacatggtcgttatgaatgaccaggtgctagagcct
cagaacgtggatccgtctatgatccagatgacctttctggacgatgtggtccactccctt
ctgaaaggagaaaacatcggcattacttccagacgaaggtcacgatccagccagaacaac
aacagtgcccacatggcgggagggagacccggcgggaccactggcaatactcagagtcat
tacacaagagcccaagccaacagcccccgccccatcatgacctcatcaggccccaaccca
aagggttcccaggggacactggctgctcagcagcagagtcagtcacagcaatgccagcaa
ccagccagccaatcgcaccactcgcccggcggcagcggcagggagccgagagagcagcgc
acctctcgctcctccaggaggaaaggatcagatagcagtgttccagaggaggacaaggac
aggagagaggagaccacagggagagactccaagtcaaaggccaagcaggctgtgaacaag
cgcagaaagggtgaggaagatgagaagaaggcaggtctaaagaggctgaagactgacatg
acctctgacctgtcagagagcagtgactcagaaaacccacacaagaggaccgcccactcc
tcatgctcctcttcctcctcctcgtcttcgtcctcatcctcgtcctcctcttcctcctcc
tcagagcccaactctgagaacgagttaaagactcgcagcagcgatgtgaaacaaagcagt
gtttccaaaaaggaggaagaggagaagccactgatacagggcaccaaaatgaatgattcc
tcgtctctcattggccgcctgtccccatgggcggagcttcaggcagcagatgacagcaag
aagggtgtggctaaagaaacgggcaatataacaacgaaggaggaggaggaactggttgcg
gtaacacagatcacccagtctccaaggcaacagacgcctctgatgtctgacagcgtccaa
agtggcagtatggagggcaacaaaaacactgtgaaagcgtcgtctcgatcccagacgcca
tcgttgtcccacctccatggtggtggtgtgattgacatcacagatgatgctcaggccacg
gtgcaccaagagagttcagaggcagtgtcggcactgctcgcctcacagaaggccgagtcc
acggccctctcaccttacctccccctcaacccctctcctgtctcctcgcctcccgtccct
ccgtctccttcgccatcagaaggaggccgcaggacggatattgagcctcccatgcagcag
cagcagggcattatgggaagtggcatgacagcagccaggagcttaggcaacaagatagag
tttgctccctccgaggtcatcaggcctgttacatcaatggttgaaactgtggtgctggtg
gagaaggagaagactgtccttcctcatcatcttcatcatcatcaacagcagcatcatccg
cagcacacacaacaacagcaacactacacatctatccaccccagcattaagagcccgtct
ctgtctgaggagacgagaaaacacccacagcaacaaccgcccccccacaagatgaacaca
gtcctcccccctgacttagccaaatctaaaataaaccccaacccagctcagctcgactcc
ttgaaacagaaaccccagcaccccaacaactctcagagccacccctaccccaacacaaac
ccagctgaccttctcaaggctaagccccacccaggcctgctggacatctccaaacctaaa
cccaacacctcaccagaggtctccaaacataaaatacagaggtaccctgatacctctcca
cctcccataagccgtttgtcggctaaagtagaaacagcagaacctccacggtctggtttt
aagccagtgccggcgcggtcagagtcaggtggagtcagtacaagcagcagcagcaccaag
agccctctgatcatcgataagaatgagaccttcactgtttacagggacccagcactggtc
cgctcagacacagagaactccgtctctgccaccgtctcctcgaaccacgtggcggcctat
ctccatccccacctgcacacccttcactccccctcccctcactccccctgcctcacctcc
acatcccacccccatgccgcctcccatcttctcgcccctcctcacagctctgccctacct
cacccacacctgttaccccccggggtgctcccagccatgcctcctcctgcagcatctctc
cttgggggccaccctcggctcgactcccccagtgggttgggccaccttgctctgcctcac
ccagcagctgcacaccagcagcagttcctacagggtcagggcccccatccaccccctctt
ctagcccaggctcacagtggggcagcaggcctgggtctttaccccatcctctggcagtac
cccaatggaacaccaacctcctaccccccagggctcaacctgccccccacagccaagtgg
gtccaccctgacaatcctgtcgctgtgaattctgatgcctctctcaggaggaacacagcc
agtccgtggttgcaccaagctgctggtagtgctggtgacggtctgggtttattgagccac
gttcccgttcggccagccagcgctgacgcccaccgcccccctgtcaagatcaacacacac
acaagccctccactgtcaaaggccagcgtgaatgctcataaagaagatgtggagaagaaa
ggctttgtggacccgatcaggacgttgacattggcccaactgaagcaggagcagacagac
aggagtcgaacccccacaggaaaagacgtccacctacatcgcctctacctagacccccac
agcaaggctcgcctggcaaatacacaggatgcagttcaggcagcagatcgagccagtaaa
tacaaagaggagaatcggcaaatcttgaaagagagcattgaggtcgctcccttcaccgct
aagatccagcgctccagcgaccccgggatggacagggacagagaaagaagcagagatcca
gcctttcctgtccggataccagctctcgcctccccaagccccaaggccagccacatccat
ccccacgtcatcccatcagagaagagcaactacttcaccacactgtccaacagtgttgtg
aatgagcctccaagactatacccctccaaggagctcagctcttactatgagaaagtgtct
ggcggaggtccaggggttgtggccagtgtcggggcggctgtgccaagtcagggagctctg
cccctgggtagctatagctccaaagcctccctctctaagcccccacctctcattaagcac
cagccagaggggggagagggtttagcggggaaaatcacagagcagctaagccagcaggtg
acactagttcagcagcaacatcagcaccacacaggtatggacaggatagaacgccgcagc
cctgccatttctccatcctgctctacatcttcctcttcctcctcagcacccaaccaccac
caccatcaccaccaccaccaccaccaacagcagcagcagcaacaccagctcagggcaatg
ccatctctccaccgagcgcctgtcttccatccgccaacacagcatgcgttggaacgcaaa
gaggctgcagaaagagagagggagcgggagaaggaaagggaacgagagagggagagagca
ggttacggtggacgtctgtctccaccaaccctcacacccatccagccagttagcttagca
gcagctggtagcaaaacatcagcggagcagcagaagcctcccacgctgcttccagagctc
agggatgtcaaaggtcatggaaatgctgccactgtcacttctgtggcctcagccatcagt
ggggagattatgacttcatctacagatgggtggagaggtggtgagatgattcgggaaaga
ggaggctcattctctggagagaaaggagtgttaaggggcaagccccaagccgcaatggca
tcagtcattgtgcgtccatcgacatctattaagtacgacagtcctgttggtgctaacaaa
tctggtgctatgatccttaaggaactcccccagggaaggttctaccaatccacgtttcag
ggggaatgtcctagactaggggagagtgttagagaagctgtcgctggcagggttatccaa
cctaactccaacctggatgacatgtgtgtccagtataaaaagcgtggcatgcagggaact
atgggagccagtatcacaaactctgtgtgcaggactgccacatcagcttttggcatacag
agtatcagtgggacagttctccctgaacagggctactcaggctcagctcgaggagagatg
tcagcccacaaaactggcatttgtggccgggtgttgagccactcgggaccaggagagtac
caggagggcttgggctcacgcacctcatctccaggggggtctctgtcatcccctagtcca
gcagggacaccccagtccagtccaagtctcaccccaacaccaagctccttttctggctcc
aatcagccttactcctcctccttcgtccaccttaagaagcacaaagctgccttggctgca
gcccagtccaggagcaacttctcccctgctcccacacccgttacaactggaaactgctcc
ctgcctgtggatccagttgagaaaaatcccattcacaactcgccacctccaccctcctct
agccaagcctcatcatcttcggttgatagcagtagcagcaactcagcaagtgggagcaca
acaacaggcaagtccagtcccctgcctaacggccaaacttctggatccgcctcgacaagc
agtgggcagcccaataactaccacaagctgaaaaaagcctggttaacccgacactcagag
gaggacaggaacacaacagctactgtaagctccaccagtactaaaccagagaaactgcct
agcaccaccaccagcacaagtaatgccacagccatgtcagaaatgatcaagccctgtaca
gtcaacctcagcgcctccacctccagtgacgtggagatgagcaaagacagtggaggcaaa
gtcgagagagagaggcagctggaggagaaggtgggaggggcggcagcagcaggaggagga
ggggaggagaggaaagcagctccttcatcaaggcgagggaacaaacggacatacgagtcc
ggttcagagagtggaggagacgactctgatgccagtgagagcaaaatagagggccgagcc
aagcgtcaacctaaaccaacctacaagaagaaacagaatgatatggccaagaagaaagga
gacaacgaaaaggaggaggatgacttgaagccgaatggcatcttcagatcagctcgagag
aagaccaaactcaagctagccagcagcaatgggatcccccgctctgtcctgaaggattgg
aggaaggtgaagaagctgaagcagacaggggaatctttcctgcaggatgactcatgcgca
gaaattggacccaacctgcagaagtgtcgagagtgcagggtggtccgtagcaagaaggga
gaggagccagcacattcccccgtcttctgtcgcttctactacttcagacggctgtcctac
agtaaaaatggagtcatccggatggatggcttctccactccagaccagtttgatgatgaa
gccctggccctgtgggtccctgggctgatggaggagagccatttggaccaaaccacagcc
aagtacatcctcagcttcataggagacaagttttgtcagatggttttgactgagaatact
gcagccacctgggtcaagaaggatgccaagctggcgtggaagcgagcagtgaggggggtg
agggagatgtgtgacgcttgtgaggcaacactcttcaacatccactgggtctgtcagaaa
tgtggctttgttgtctgcttggactgctacaaggccaaggagagaaggagctccaaagac
aaagaactctacggctggctgaagtgtgtgaaaggccaaccccatgatcacaaacacctg
atgccaacacagataatacctggcacagtgctgacagagttggtgactgccatgcactct
ctgagagaaaaatacaacatcaaatgtcactgtccctgcaccaacaagcagaacctcctc
agcaaactaccagccaccaatggcgtctcacaggttctgcagaacgtcctgaaccacagt
aacaaactgtctctggtgaaagctgagccggggtcccagcagaactctgaccaagcagga
accaaggcagagactaatggaggtggtggtggaggcagcagtccaggcagcgacgcagga
agtgctcctgtaacaccacccgagtcccagtcacctctgcacttcctggctgacctggca
gagcagaaatccagggaggagaagaaagaaaacaagtcagtgctgctgggtaaatcagtg
aaggaagacaaggagggggacagcctggaggtcctgcagcagtgtaagaccacctcactg
gtggccaacagtacagagcagggctccacactccgagatctgctcaccaccacagcaggg
aagctgaaactgggctctactgatgcagggattgcctttgcaccagtctactctactgcg
tcacagaccggaaaaggtgggaggaccatgcccaatatcctcgatgacatcattgcttct
gtagttgagaataaaatccccgccagccgccagaacatcaccaccaaactgtcaatcaag
caagagcctgtcaacccaggaaacaacaaccctacccctgctattactgaagatgccaaa
ccagacaggaagaagtcagcgcatgttactgcagcagtgccagaagattcatccagtcag
tatccagatattccccactgctggttaaacaatagacggttgctgtggctcaaagatcac
cgcaaccagaacaactggaagctgttcagagagtgctggaaacaaggacagcctgtgttg
gtgtcagggatccataagcggctgaatggcggcctgtggaaagccgactccttcaaccaa
gagtttgcagaccatcagggagacctcctcaactgtaaagaccaggtggtgtccaactcc
gggatcaaggagttctgggatggatttgaagacatcaccaagcggcccaagtccaaggat
ggagaaccaatggtgtacagactgaaggactggccatctggagaggagtttatggcactc
atgccctcaagatatgatgacttaatgaagaacctgcccctgccagaatactcagaccca
gagggcaacctcaacctggcctcccacctgccatctttctttgtcaggccagatctgggg
ccaagactatgctgtgcctacggtgtggctgcatctcaggaccaggactttgggactgcc
aacctccatgtggaagtctcagatgtcgtctctgttctggtctatgtaggagtagccaaa
ggcaatggagtcctttccaaaactggagtgttgaagcgtctggaggaggaagatctagat
gagggggttcgaaggaggctcaaagactccagtgagacaccgggggcgctgtggcacatc
tacctcaacaaagacatggacaaaatccgagagttcctgcacaaggagcagggattagac
atttcactggaccaggacccaatcagagagcagggcttgtacctgagcaggaagcagcgt
cagcggctactggacgaacatggagtccagggctggactgtagttcaattcttgggagac
tctgtactgataccagcaggggccatgcaccaggtccagaacctccacagctgtgtccag
gtcatcaatgactttgtgtctccagagcacgtggccaactccttccacctgacccaggag
ctgcggcccaacaaagaggaggtcaactacgaggataaactacaggtgaagaacatcctg
taccactgtgtgaaggaggcggtgagctccctgaagaggggcagctctgaggaagatgac
gaggaagagaactcatga
DBGET
integrated database retrieval system
