Epinephelus lanceolatus (giant grouper): 117254576
Help
Entry
117254576 CDS
T07331
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117254576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117254576
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117254576
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117254576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-Nse
U-box
zf-RING_6
zf-RING_4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
117254576
NCBI-ProteinID:
XP_033478819
LinkDB
All DBs
Position
6:complement(6671906..6693911)
Genome browser
AA seq
613 aa
AA seq
DB search
MAQANISVTESQFRCPVCLDILKDPVSTPCGHTYCMSCINNYWDQAESGQFSCPQCRETF
SPRPVLRRNTVLAEVVDKLKLSEMVTAPPELYLGGVGEVPCDFCPAESKLRAVKSCLVCL
ASFCELHVLPHREVGTLRRHKLVAAVECLAERLCAQHRLGLEPAGSGSEAEAAVEWSGDC
LLCEADQEEVHSADAQRTRRQLQLQECQRIVQGRTRSGERELEEFQQSLESLKVSASAVL
EDSEALFADMALRLEKTKAEVRARLEAKERAVVGRAERDIEMLEKDLEELRKRDEAISQL
LHTEDNAHFLQAAPLLCVPLTTGRHSRALSLPTEGFSGARRALCHLRSRMEEVCREEVDK
ISRAVNENYVSGAECAKGGSAENSKPQQVHPTLSAGQQTTGAMPVSFPLSSLSLQPADQR
MRGAFLRFSCRLSLDPDTAHPTLVLLQGPQGAHCGEEPQSYPPDQQRFDSVAQVLCREGQ
FGGASYWEVEWRGGGWVDIGVTYRGIGRKGGGKPCLLGRNENSWRLRCTHAGYAAWHDNR
KTTVAAPPCPRIGVFLERQKGALSFYSVSDTVVLLHTFRCPFSQPLYPAFRLDLDSTLLI
CPHEGQGGNAHPP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcccaggcgaatatctcggtgacggagagccagttcaggtgtcccgtctgcctggac
atcctcaaggacccggtgtccaccccctgcggacacacctactgcatgtcgtgcatcaac
aactactgggaccaggcggaatcgggccagttcagctgcccccagtgccgggagacgttc
agccctcggccggtgctgcggcggaacacggtgctcgccgaggtcgtcgacaaactcaag
ctgagcgagatggtcacggcgccgccggagctgtacctggggggagtcggggaagtgccg
tgcgacttctgcccggcggagagcaagctgagggcggtcaagtcgtgcctggtttgtctg
gcgtccttctgcgaactccacgtcctgccgcaccgggaggttggcacgctgcggcggcac
aagctggtggccgcggtggagtgtctggcggagcggctgtgcgcacagcaccgcctgggt
ctggagcccgcggggagcggctccgaggcggaggccgcggtggagtggagcggggactgc
ctactgtgcgaggcggaccaggaggaggtgcacagtgcggacgcccagagaaccaggaga
cagctgcagctccaggagtgtcagcggatcgttcaggggaggacacgcagcggagagaga
gagttggaggagtttcaacaaagcttggagtccctcaaggtgtcagcgtcggctgttttg
gaggacagtgaagctctgtttgcagacatggcactccgcctggagaaaaccaaagcagag
gtccgagcgaggctggaggcgaaggagcgggcggtggttgggagggccgaacgagatata
gagatgttggagaaagacctggaggagctgaggaagagagacgaggcgatcagtcagctt
ctgcacacggaggacaatgcccatttcctacaggcggctcccctgctatgcgtccctctc
accaccggtcggcactctagagccctcagcctgcccacagagggtttcagcggcgccagg
agagcgctgtgccacctccgcagccgcatggaggaggtctgcagggaggaggtggacaag
atcagccgcgcagttaacgagaactacgtgtctggtgcagagtgtgcaaaaggtggcagt
gcggagaactccaaaccacagcaagtacatccaacactatctgcagggcaacaaaccact
ggggcgatgccggtgtcgttccctctgtcctcattgtctctgcagccggctgatcagagg
atgaggggagctttcctcaggttttcatgtcgtctatccttggaccctgacacagcccac
cctaccctggtcctcctgcaggggccccagggtgcgcactgtggcgaggagccccaatcc
taccccccggaccagcagcgcttcgattcagtggcccaggtcctgtgcagggaaggccag
tttggtggtgccagctactgggaggtggagtggaggggcgggggatgggttgacatcggc
gtcacctacagaggtatcggacgcaaaggtggcggtaaaccctgcctgctggggcgcaac
gagaactcttggcgactgaggtgtacacatgccggatacgctgcctggcatgacaaccgc
aagaccacggtggctgcaccgccatgccccagaatcggcgtgttcctggagcgccagaaa
ggagcgctgtccttctacagcgtgtcggacacagtggtgctcctgcacacctttcgttgt
ccgttctctcagccgctgtacccggccttccgcctcgacctggactccaccttgctcatc
tgtcctcatgaggggcagggaggaaatgcacacccaccctaa
DBGET
integrated database retrieval system
