Epinephelus lanceolatus (giant grouper): 117255033
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Entry
117255033 CDS
T07331
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117255033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ely03021
]
117255033
03036 Chromosome and associated proteins [BR:
ely03036
]
117255033
Transcription machinery [BR:
ely03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117255033
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
117255033
Chromatin remodeling factors
BAF complex
117255033
PBAF complex
117255033
GBAF(ncBAF) complex
117255033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
117255033
NCBI-ProteinID:
XP_033479472
LinkDB
All DBs
Position
6:complement(40761318..40787756)
Genome browser
AA seq
1676 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSSHSMMGPSPGPPSSGHSQPGPS
GYGQDNMHPLHKPMESMHEKSLSEESRFSQMKGLTMRQGGHSGMGPPPSPLDQHSQGYHS
PLGGSDHSSPVPSNGPPSGPLMPSSSSSSSSGGPGSASTPLDGPSGDQHTLGPNNRPGPP
GSSGPGPSPGPSLGPSVSTLGSGLESGGPPGPGGPTPFNQNQLHQLRAQIMAYKMLARGQ
PLPEHLQMAVQGKRPMPGMQQQQPMPTLAPGAGGGPVGGPAGPVPGPGPMGSGYSRAHGM
MGPNMPPPGPSCTPAGMQGQNPNGPPKSWPEGPMVNAAAPSNAPQKLIPPQPTGRPSPAP
PSVPPAASPVMPPQTQSPGQPAQPTPMMPYHAKQNRITPIQKPCGLDPVEILQEREYRLQ
ARITHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALD
AKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITG
KMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQ
QTDEYVANLTELVRAHKAAQALKEKKKKKKKKKKKLENAEGQTPAMGPDGEPLDETSQMS
DLPVKVIHVDSGNILTGLDAPKAGQLDTWLEMNPGYEVAPRSDSEDSEEEEEEEEGEEEP
HPSATQVEEKKKITDPDSEDVSEVDVRHIIENAKQDVDDEYSGAAFERGLQSYYSVAHAV
TEKVEKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME
HKRLNGPYLIIVPLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRSGKFNVLLT
TYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKL
PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLR
RLKKEVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNT
IMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLRATSHK
VLLFCQMTSLMTIMEDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNDPGSEYFIFLLSTRA
GGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAA
KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVCLRMNEEDEVPDDE
TVNQMIARSEEEFDQFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVERLTCE
EEEEKMFGRGSRQRKEVDYSDSLTEKQWLKSVFPIQAIEEGTLEEMEEEVRHKKTTRKRK
RDRDLDLPGPSSSSGGRGRGDKDEDGKRQRKRGRPPAEKLSPNPPALTKKMKKIVDAVIK
YKDSTSGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRGHRYRSLGDLERDVML
LFQNAQTFNLEGSLIYEDSIVLQSVFTSLRQKIEKEEESEGEESEEEEEELEEGSESESR
SVKVKIRLGRKDKGGDRGKGRSRRTGRTRAKPVVSDDDSEDEQEEERSPSATDEES
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgccagatccccccatgggaggcacccctcgcccaggtccttcccctggtccg
ggtccctctcctggggctatgctgggccccagccccgggccctccccaggctcttctcat
agtatgatgggccccagccctggtcctccctcgtctggacactctcagccagggccctct
ggatatggccaggacaatatgcaccctctgcacaaacccatggagagcatgcatgagaag
agcttgagtgaggagagccgctttagccagatgaagggactgactatgagacagggcggg
cacagtggtatgggtcctccacccagtcctcttgaccaacactctcaaggttatcactct
ccattaggtggctctgaccactccagccctgtcccctcaaacggtcccccctctggaccg
cttatgccatcatcctcctcttcctcctcctctggcggtcccggctcagcctccacaccc
ttagatggccccagtggtgatcaacacaccctgggtcctaataaccggcccggccctcca
ggtagctccggcccaggcccaagccctggacccagcctgggacccagtgtctccaccctt
ggatctggcctcgaatctggaggccctccaggccctggtggccctactccctttaaccag
aaccagcttcaccaactcagagcccagatcatggcttataaaatgctggcccggggacag
cccctgccagaacacctccagatggcggtccaagggaagaggccgatgcctgggatgcag
cagcagcaacccatgcccactctggctcctggagctggaggcgggccagtaggtggacca
gcaggaccagtaccagggcctgggccaatggggtcaggctacagtcgagctcatggaatg
atgggtcccaacatgcctcctccaggcccatcctgtactccagctgggatgcagggacaa
aacccaaacggaccacccaaatcctggcctgaaggccccatggtgaacgcagcagccccc
tccaacgcaccccaaaagctgattccgcctcagcccactggtcggccctctcctgcccca
ccttcagttccccctgctgcctccccagtaatgcctccacagactcagtcccctggccag
ccggcacagcctactcccatgatgccttaccacgcaaagcagaaccgcattacccccatt
caaaaaccctgcggccttgacccagtggagatactgcaggagagggagtacaggttacag
gctcgtatcactcatcgtattgctgaactggagaacctgccgggctctctggctggtgat
ttacgtaccaaagctactatagagctcaaagccctccgcctgcttaacttccagagacag
ctgcggcaagaggtggtggtgtgtatgcgtcgggacacagctctggagactgcccttgat
gcgaaggcgtataagcggagcaaacgtcagtccctgcgagaagcgcgcatcacagaaaaa
ctggagaaacagcagaagattgaacaagagcgcaaacgcaggcagaaacatcaggagtac
ctcaacagcatcctgcagcacgccaaagacttcaaagagtaccatcgctccatcacaggc
aaaatgcagaaactgaccaaagcagtggccacgtaccacgccaacactgaaagggagcag
aagaaagagaatgagcgtattgagaaagagaggatgaggaggctcatggctgaagatgag
gagggctatcgtaagctgattgaccagaagaaggataagcgtctggcctacctgctgcag
caaacggacgagtatgttgccaacctcaccgagctggtcagagctcacaaagctgcacag
gccctcaaggagaaaaagaagaagaagaagaaaaaaaagaagaagttggagaacgctgag
ggtcagactcctgccatgggtcctgatggagagcctctggatgagacgagtcagatgagt
gacctgcctgtgaaggtcatccatgtcgacagtgggaacatcctgacaggactggatgct
cctaaagctggacagctggacacctggctggagatgaaccctggttatgaggtggctccc
cgctcagacagtgaggacagcgaggaggaggaagaggaggaggagggagaggaggagccc
catccatcagctactcaggtggaggaaaagaagaagattacagaccccgacagcgaagac
gtgtcggaggtagacgtacgacacatcatcgaaaatgctaaacaggatgtggatgacgaa
tacagcggtgcagcgttcgaacgtgggctccagtcttattattctgtggcacacgctgtc
acagagaaggtggagaaacagtccagtttattaataaatggacaacttaaacagtatcag
attaaaggtctggagtggctggtttccctctacaacaataacctgaacgggatcctggca
gatgagatgggtctgggaaaaaccatccagaccatcgccctcatcacatacctcatggag
cacaaacggctcaatggtccctacctcatcattgtacccctctcaactctttctaactgg
gtgtatgagtttgacaagtgggcaccgacagtcgtgaaggtgtcctacaaggggtctcct
gctgctagaagagccttcgtcccccagctgcgcagtggaaagtttaacgtgttactcacc
acttatgagtacattatcaaggataaacaagtactggcaaagattcgttggaagtacatg
atcgtggatgaaggacaccgtatgaagaaccaccactgtaagctgacccaggtcctgaac
acccactacctggccccacggcgagtcctgctgacaggaacgccattgcagaacaaacta
cctgagctctgggcgttgctaaacttcctcctgcccaccatctttaagagctgcagcacc
tttgagcagtggttcaacgcccctttcgccatgactggagagaaggtggaccttaatgaa
gaggagaccatcttgattatccgtcgtctccacaaagtgctccgtcccttcctgttacgc
agattgaagaaggaagtggaggcacagcttccagagaaggtggaatatgtgatcaagtgt
gacatgtcgtctcttcagagggtgctgtacaggcacatgcaggccaagggggtcctgctc
actgatggatcagagaaggacaagaagggtaaaggcggcacaaagacgctgatgaacacc
atcatgcagctgaggaagatctgtaaccacccttacatgttccagcaaatagaggaatct
ttttctgaacatttaggattctctggtgggatagtccagggtcctgacttatatcgggca
tcaggaaagtttgaggtgttggatcgaatcctgccaaagctgagagctacaagccacaaa
gtgctgctcttctgtcagatgacctcactcatgaccatcatggaggactacttcgcatat
cgcagcttcaagtatctacgtctagatggcactacaaaggccgaggatagaggaatgtta
ctgaagacattcaatgacccagggtcagagtactttatcttcctcctgagcacaagagct
ggaggcctcggcctcaacttgcagtctgcagacaccgtggttatttttgactctgactgg
aacccacatcaggacctgcaggctcaggacagagcccaccgtattggtcaacagaacgag
gtccgtgtgttacgactctgcacggtcaacagtgtagaggagaaaattttggccgctgcc
aagtacaaactaaatgtggaccaaaaggtcattcaagcaggcatgtttgaccagaagtct
tctagccacgagcgcagggccttcctgcaggccatcctggaacacgaggagcaagacgag
gtctggggtcaggaagtgtgtctacgcatgaatgaggaggatgaggtgccggatgatgag
acggtcaaccagatgattgccaggagtgaggaggagtttgaccagtttatgcgtatggac
ctggaccgacgtcgcgaggaggcccgtaatccacgacgaaaacctcgtctgatggaggag
gacgagctgcccacttggatcatgaaagacgacgctgaggtcgaacgcctaacctgtgag
gaagaggaggagaaaatgtttggacgaggttcgcggcagcggaaggaggtggactacagc
gattcactgacggagaagcagtggctcaagtctgtgtttcccatacaggcaatagaggag
ggcaccctggaggagatggaggaggaggtgcgtcacaaaaagacaacccgcaagaggaaa
cgggaccgcgacctggacctgcctggtccctcctcatcttcagggggaagaggacgaggg
gacaaagatgaagatgggaagaggcagaggaagaggggacgaccgcctgctgagaaactc
tcccccaacccccccgctctcacaaaaaagatgaagaagatcgtggacgctgtcatcaag
tataaagacagcaccagtgggcgtcagctgagcgaggtgttcatccagctgccatctcgg
aaagagctgccagagtactacgaactgattcgcaagcctgtggacttcaggaagatcaag
gagaggattcgagggcatcgctaccgcagtctgggcgacctggagagagacgtcatgctg
ctcttccaaaacgctcagaccttcaacctggagggatcactgatatatgaagactccatc
gtcctccagtccgtgttcaccagtttgaggcaaaagattgagaaggaggaggaaagtgag
ggagaggagagtgaggaagaggaagaggagctggaggaaggatccgagtccgaatctcgc
tcagtgaaagtgaagattcgtctgggaaggaaggataaaggtggagatcgaggaaaggga
cgcagcagacgaacaggacgcaccagagccaaacctgttgttagtgacgacgactctgag
gatgagcaggaagaggagcgttcccccagtgccactgacgaggagtcctga
DBGET
integrated database retrieval system
