Epinephelus lanceolatus (giant grouper): 117255250
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Entry
117255250 CDS
T07331
Symbol
rims1b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117255250 (rims1b)
Membrane trafficking [BR:
ely04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
117255250 (rims1b)
Small GTPases and associated proteins
Rab associated proteins
117255250 (rims1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
117255250
NCBI-ProteinID:
XP_033479847
LinkDB
All DBs
Position
6:15143752..15234828
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AA seq
1687 aa
AA seq
DB search
MSASVGPQGGPRPPTVPPSMPDLPDLSHLTEEERKIIMAVMARQKEEEDKEQAMLKTLHQ
QFESYKQEVRRIGAETRRQQTQQKDDAPTCGICRKTKFADGCGHLCSYCQTKFCARCGGR
VSLRSNNEDKVCLIVKDRVMWVCNLCRKQQEILTKSGEWFSGSGVRPGSLGTSVNNPATG
GEAQRDRKLLRSRSQAPPSGTNTNAGPPDGTQPPTGVTSAKGADTMPGSRSQSEPPREKK
RPVSLHEQNGKGGMGRGSGRRPGGKLPSQSSLDERVVPGDRGERRLGDGRRLEKIHSQDY
EDGEGNLGRPETHRRRPEDEEQRERQRREEEFQNRYRSDPNLARYPVKPQKEEQEMRMHA
KVSKVRHERRHSDLAINEVGLGPEGGGSGSGGEVPENRLARRGGGGEGDHKALLENHRAY
SVDRTVGGGGGAPPAGGGVRSGPQPGGPVPPDWGPNKGRLEPGTTRTPRDKGGDNLLRKD
SQSSDQSESLRPPPPRSYKSKRGVNKRQMSISSSEEEGGSTPEYTSCEDVDMESVSEKGD
WDCHSLDPTVWHHPVTWQPSKEGDHLIGRITLSKRSAMPREAGSLLGLKVVGGKMTETGR
LGAFITKVKKGSLADVVGHLRAGDEVLQWNGKSLPGATKKEVYNIILESKAEPQVEIVVS
RPIGSIHRIMSKNFLRKVYRAYQDIPRIPESSHPPLESTGSSSFESQKMDRPSISVMSPT
SPGTLRDLPLVLPGQLSVKLWYDKVGHQLIVNVLQAIDLPPRPDGRPRNPYVKMYFLPDR
SDKSKRRTKTVKKSAEPKWNQTFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEIL
IELETALLDDIPHWYKLQTHDMSSIPLPQPSPYLPRRHVHGDSPSKKLQRSHRIIDTEFD
DGLMVVTKGAERNSRERERGSTLAVPEQQRPVQHRSRSVSPHREDSCRARSRPAHVPMQR
SLDEIHQNRHHSHSPSRYHDSHLEHQRSGDSDYEYSEDSEVLEMHRSIRGGSAECLHTNR
GIGRYSNTLPPKMPLLVNGIHKDIYSSTLPACLKSKPPHRQEGGSTMPRSILTHRVLRFT
DEVTVSDLQPSLDRVRSASTTCLRPDTNFHSPERDRCSNSLPRKTLPSPRILVEHVAPEE
DRQCSNSSSPNCQRGSKKSLEGDSRIQPTSILRGSRGRGGPLRPFGQTVLAGSCPNSPRL
DRAHPHGSPSSPTGTPSSGRRGRQLPQLPAKSSSIEQALAVEERARQLQMKVHSYRPSAS
HDPETDLKTKREMYAEKRRSSDNMSARSSDSDMSDVSALSRASSASRLSSTSYMSIQSER
PGGRLRSKSLEEEKKDRRISWGVEGEEDRRRATGKRRFSEELKRRRHTVAGDTRESSRQM
RSVGRSMLKSSSVSGEIYTQERTDGSQSDTALGTVGGGSKKRRSSLSARVVAIVGNRRSR
STSQISGPEGKSKKEKGAPIQRSTETGMAVELTRNMSRQPSRESNNGSMNSYNSEGNLIF
SGVNLGASSQFSDFLDGLGPAQLVGRQTLATPAIGDIQIGMMEKKGQLEVEVIRARGLVQ
KPGSKSLPAPYVKVYLLNNGAYVAKKKTKIARKTLDPLYQQALLFEESPQGKVLQVIVWG
DYGRMDHKSFMGVAQILLEELDLSSTVIGWYKLFPPSSLVDPTLASLTRRASQSSLDSSS
GPPGVRS
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcggtggggccccagggtggccctcgcccacccaccgtgccgccatccatg
ccggatctgccggacctcagccatctcaccgaggaggagaggaagatcatcatggcagtg
atggctcggcaaaaggaggaagaggataaagaacaagccatgctaaaaacactgcaccag
cagtttgagagctacaaacaggaggtgcgtcgcatcggggcggagacgcggcgtcaacag
acccagcagaaggacgacgcgcccacctgtggcatctgccgcaagaccaagtttgctgat
ggctgtggccacctctgctcctactgccagaccaaattctgcgctcgctgtggagggcgg
gtctctctgcgctccaacaatgaggacaaagtgtgtctcatagtgaaggacagggtaatg
tgggtatgcaacctgtgccgtaaacagcaggagattcttaccaaatcaggagaatggttt
tcggggtcaggggtgcggcctgggagcctgggcacctccgtgaacaacccagccactgga
ggtgaggcccaacgggacaggaagctactccgctccaggtcccaagccccaccctccggc
accaacaccaacgcagggccaccggacgggacgcagccgcccactggtgtcacttctgcc
aagggtgctgacaccatgcccggctcccgctcccaaagtgaaccacctagagaaaagaaa
agaccagtttccctccatgaacaaaatggtaaaggaggaatggggcgtggtagtggccgt
agacctggtgggaagttgccatctcagtcatcactggatgagcgagtggttcctggggac
agaggagagagacgcttaggagatggacggaggctggagaagatccattctcaggactac
gaagatggggaggggaacttgggtcgtccagaaacacaccggagacgcccagaggatgag
gagcagagggagcgccagcgccgcgaggaggagttccagaatcgttatcgtagtgatccc
aacctggcacgatacccggtgaaaccacagaaggaggagcaggagatgcgcatgcatgct
aaggtgtccaaggtccgccacgaacgacgacacagtgatctggctatcaacgaggtcgga
ctggggcctgaaggaggaggtagtggaagtggaggggaggtgcctgaaaaccgtctggcc
aggaggggtggaggtggtgagggagatcacaaggccctcttggagaaccaccgagcctac
tctgtggataggaccgtggggggtggagggggagctccacctgcaggaggtggagtgaga
tcaggaccccaacctgggggaccggtgcctccagactggggcccaaacaaaggccgcctc
gagcctggtacaacacggacaccaagggacaagggtggggataacctgctgaggaaggac
tctcagagctcggaccagtcggagtctttgcgtccgccccctccacggtcatacaagagc
aagcgcggagtcaacaagaggcagatgtccatcagcagctcagaggaggaaggcggctcc
acgcccgagtacaccagctgtgaggacgtggacatggaaagcgtcagcgagaaaggtgac
tgggactgtcattctctagatcctacagtgtggcatcatccagttacatggcagccatcc
aaagagggtgaccacctaattggacgcatcacgctaagcaagaggtcggcaatgccccgt
gaggctggctccctccttggcctaaaagtggtaggagggaagatgacagagacagggaga
cttggggcctttatcaccaaagtcaagaaaggcagccttgcagatgttgtgggacaccta
cgagcaggtgatgaggtgcttcagtggaacgggaaatcgttgcccggagcaacaaagaaa
gaagtgtacaacattatccttgaatccaaggctgaacctcaagtggaaatagttgtttca
agacctataggctccatacaccgaattatgtccaaaaacttcttgagaaaagtgtataga
gcatatcaagacatcccaagaatcccagagtcatcccatcctcctctagaatctacgggc
tccagttcctttgagtcacaaaagatggaccgtccctcgatatcagtgatgtcccctacc
agccccgggaccctccgagaccttcctctggtactgcctggacagctctctgtgaagctg
tggtacgacaaagtgggccatcagttgatcgtcaatgtccttcaagccatagacctgcca
ccccgaccagacggacgacctcgtaacccctatgtaaagatgtacttcttgcctgatagg
agtgataagagtaaacgacggactaaaacagtgaagaagagcgctgagcccaagtggaac
cagaccttcttatattcccacgttcaccgacgggacttcagagagcgcatgctggagatc
acagtctgggaccagcccagagtccaggaggaggagagtgaattcctgggagagatcctg
atagagttggagacggccctgctggacgacattcctcattggtataaactccaaacacat
gacatgtcctctatacctctgccccagccctccccgtacctcccacgcagacacgtccac
ggagacagccccagcaagaaactacagaggtctcatcgcatcattgatacagagtttgat
gatggtttgatggtagtgactaaaggtgcagagcgtaactccagggagagagagcggggc
agtacgctggctgtgcctgagcagcagcgtcccgtccagcaccggtcacgttcagtgtct
cctcacagagaggactcctgcagggctcggtcacggcccgcacatgtgcccatgcaaagg
agtctggatgagatccaccagaaccgccaccactcccactccccctcccgctaccatgac
tcccacttagagcaccaacgctctggggactcggactacgagtactctgaggacagtgag
gtcctggagatgcacaggtctatccgaggcgggagtgctgagtgcctgcacacaaacagg
ggcataggtagatacagcaacacgctaccccccaaaatgcccctgttagtaaacggtatc
cataaagacatttacagctccaccctccccgcatgcctaaagagcaagccgccccacaga
caggaggggggcagcaccatgcctcgtagcatccttacacaccgtgtgctcaggttcact
gatgaggtcacagttagcgacctgcagccgtcgttggacagagtgaggagtgccagcacc
acttgtctgagaccagacaccaactttcactcccctgaaagagacaggtgctccaactct
ttgccccgcaagactctccccagcccccggatcttagtagaacatgtggcccctgaagaa
gacaggcagtgtagcaattcatcaagtccgaactgtcaaaggggcagcaaaaaaagcctg
gagggggacagtcgtatccagcccacctctatcctgaggggcagtagggggagagggggc
ccgctgaggccctttggccagacagtcctggctgggtcctgcccaaactcgccacggcta
gacagagcacaccctcacggcagcccctcctctccaacggggactccctcatcaggtcgc
aggggcaggcagctgcctcagctccctgcaaaaagcagcagtatagagcaagcccttgca
gtagaggagcgagcccgacagctgcagatgaaagtacattcctaccggccttcagcctcc
cacgaccctgagacggacctcaagaccaaacgggagatgtacgcagaaaagaggcgtagc
agcgacaacatgtcggccagatcgtcagacagtgatatgagcgatgtgtcggccctctcc
cgtgccagcagtgcctcccgcctcagtagcaccagctacatgtctatccaatcagaacga
cctggaggacgactcagatccaagtcattagaggaagagaagaaggacaggaggatctcg
tggggggtagaaggagaggaggacaggaggagggcaacagggaagagacgtttctctgag
gagttgaagcgcaggagacacacagtagctggagacacgagggagtccagtcggcagatg
cgatcggtgggccgcagcatgctgaagagctccagcgtgagcggggagatctacacccag
gagcgcaccgacggcagccaatcagacacggcgctgggcacagtgggtggcggcagcaag
aagagacgctccagcctcagcgcgcgggtggtggccatcgttggcaaccgccgcagccgc
agcacttcacagatcagcggccctgaggggaagagtaagaaggagaagggcgcaccgatc
caaaggagcacagaaaccggcatggcagtcgagctgaccaggaacatgagtcgccagccc
agcagagagtccaacaacggcagcatgaacagctacaactctgagggaaatttgatcttc
tctggagtcaatctgggtgccagcagtcagttcagtgacttcctggacggcctaggaccg
gctcagctagtggggagacaaacactggccactccagccataggtgacatccagattggc
atgatggagaaaaagggtcagctggaggtagaagttattagagcacgaggactcgtacaa
aaaccaggatccaaatccctccctgctccatatgtcaaggtctatctgctgaataatgga
gcgtacgtagccaaaaagaaaaccaagattgcacggaaaacacttgacccactgtaccag
caagcactgctatttgaggaaagcccacagggtaaagtcttacaggtgattgtatggggc
gattacggccgcatggaccataaaagcttcatgggagttgcacaaatcctattggaggaa
ctggacttatcaagcacagtcattggttggtacaagttgttcccaccgtcctccttggtg
gatccgacacttgcctccttaacgcggcgggcttcccagtcgtcacttgacagctcctcc
ggacctcccggcgtccgatcctag
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