Epinephelus lanceolatus (giant grouper): 117257982
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Entry
117257982 CDS
T07331
Symbol
cacna1fb
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1F subunit
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04010
MAPK signaling pathway
ely04020
Calcium signaling pathway
ely04260
Cardiac muscle contraction
ely04261
Adrenergic signaling in cardiomyocytes
ely04270
Vascular smooth muscle contraction
ely04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117257982 (cacna1fb)
04020 Calcium signaling pathway
117257982 (cacna1fb)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
117257982 (cacna1fb)
09153 Circulatory system
04260 Cardiac muscle contraction
117257982 (cacna1fb)
04261 Adrenergic signaling in cardiomyocytes
117257982 (cacna1fb)
04270 Vascular smooth muscle contraction
117257982 (cacna1fb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117257982 (cacna1fb)
Ion channels [BR:
ely04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117257982 (cacna1fb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117257982
NCBI-ProteinID:
XP_033484308
LinkDB
All DBs
Position
8:1445631..1496149
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AA seq
2067 aa
AA seq
DB search
MYEERHKSAGRNGYTKAVDGEEGGGEGEEEEEGGEGDGGGEGEGHERDADWDAELDGEDE
GGVRMTRTDTLHSTTSSTGTQRKRGQHAKKQVQGSNQVQRAPRALYCLKLNNPIRRAALS
IVEWKPFDIFILLAIFANCVALGVSKPFPEDDSNSTNHDLEQVEYVFLIIFTVETFLKIL
AYGLVMHPSSYIRNGWNLLDFVIVIVGLFSVVLETMTHKSGEVATSHHVPGKPGGLDVKA
LRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMH
RTCYYIGTDNYVEDDPVPCAFAGHGRQCMVNGTECRGRWDGPNGGITNFDNFFFAMLTVF
QCITMEGWTDVLYWMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKA
RGDFQKLREKQQMEEDLCGYMDWITQAEDMDELDEDGNPRPSLGDLSDKKRGKFGWFSHS
NETHASLPASETASENTENIDEEHTNCCQACCSRMMKIGCCRTLRRWNRVCRRNCRTAVK
SVTFYWLVLLLVFLNTSLSASEHYNQPDWLTQVQDIANKVLLSLFTVEMLLKMYSLGLAH
YFVAFFNRFDCFVVCGGIMETILVELEIMPPLGISVLRCVRLLRIFKVTRHWTALSNLVA
SLLNSMKSIASLLLLLFLFLIIFALLGMQLFGGKFNFDETQTKRSTFDAFPQALLTCFQI
LTGEDWNVVMYDGIMAYGGPVFPGMIVCVYFVILFICGNYILLNVFLAIAVDNLAGGDGD
DKKKEKKTEGAEEGEAGVEEGEEEEAKVDIDEDTEYEEEEELPEGEDDGGVQLKMADLAP
PKEKVLPIPEGSAFFCLSKTNPIRVACHTLIHHHIFTNLILVFIILSSCSLAAEDPIRAH
SFRNNILGYADYAFTSIFTVEILLKMTVHGAFLHQGSFCRNWFNLLDLLVVSVSLVSFFL
HSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACI
GVQLFKGKFYRCTDEAKHTPEQCKGTFVVYKDGDVNLPMVRERIWQNSDFNFDNVLMGMM
ALFTVSTFEGWPALLYKAIDANGENSGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVI
ITFREQGEQEYKNCELDKNQRQCVEYALKAQPLKLYIPKNPVQYKFWSIINSTGFEYVMF
VLILLNTVTLAVQHYEQSKTFSYIMDILNMVFTGLFTVEMLLKLLALRLRHYFVDAWNSF
DALIVVGSVVDIVVTEFSSGEDSSRVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSL
QALPYVALLIAMIFFIYAVIGMQTFGKVAMQDHTQINRNNNFQTFPQAVLLLFRCATGEA
WQEIMLASLPGKRCDPESDYEPGEEFSCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNF
DYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVA
CKRLVAMNMPLNSDGMVTFNATLFALVRTALKIKTEGNPDQENEELRGIIKKIWKRMKPK
LLDEVIPPHEEEEVTVGKFYATFLIQDYFRKFRKRKEKGNLTGEPDATNPSAVQLCKAGL
KTLQDLGPEMRLALNEDLEEEDEAMMEDEEMEEDAAYEGENGFGPEKDRRGSILTTPTGP
GGVVGDGGVSNGGLVHRVGSLTKMPNGSERDEHIRRGDNMRSSINHHHQRRPSVRNGLLD
HKRPSYHKYARRDSRDRYWRNGDMEAYGEQGYYSREEDNDSITSRDRHYPEEPPLYRDHY
DGHAPYTNSSYGNGYNEGRRTTRRRLLPATPTGRKPSFNIQCLRRQGSSDDLPIPGTYHP
TSPPRRTRTQTFSSYESRHSSGRSSAASSASWANPCPRRGRLLYAPLILVEEEGRGEVKK
GGAGRGVSVTGAAPRPAWYGGPAGTSAPPPYRAYTTLRVPSQLGAQLTEKRGSADSLVEA
VLISEGLGLYARDPKFVAFAKREIADACHMTVDEMESAASDLLGTGSHSFLSSVAADPAA
LYSDEEPIRTGRDEDELADEMTCVTSF
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaggagagacacaaaagtgctggtcgtaatggctacaccaaagcagtggatggg
gaagagggagggggtgagggtgaggaagaggaggagggaggagagggggatggaggggga
gaaggagagggacacgagagggatgcagactgggacgcagagctggatggagaggacgaa
ggaggagtgaggatgacgagaaccgacacgcttcattcaacgacaagttcaacggggaca
cagaggaagagaggacaacacgctaagaaacaggtccagggaagtaatcaggtccaacga
gctcccagagcattatactgtctaaaactcaacaatccaatcagacgagccgctctctcc
atcgtcgagtggaaaccctttgatatcttcatcctgttagccatctttgccaactgtgtg
gctctgggagtttccaaaccgtttcctgaggacgactccaactccaccaaccacgacctg
gaacaagtggagtacgtcttcctcatcatcttcaccgtagagaccttcctgaagatcctg
gcctacggtctggtgatgcaccccagctcctacatacgcaacggctggaacctgctcgac
ttcgtcatcgtcatcgttgggttgttcagcgtcgtcttggagacaatgactcataaatct
ggtgaggtggcgacgtctcatcatgtgccggggaaacctggaggtctggacgtcaaagct
ctgagagccttcagagtcctgaggcccctcagactggtctctggagtccccagtctgcag
attgtgttgaactccatcatgaaggcgatggttcctctgctccacatcgctctgctggtt
ctcttcgtcatcatcatctacgccatcatcggtctggagctcttcataggacgcatgcac
aggacctgctactacataggaacagataattacgtggaggacgacccggtgccgtgtgcg
tttgccggtcacggtcgtcagtgcatggttaacggcaccgaatgtcgggggaggtgggac
ggtcccaacggaggcatcaccaacttcgacaacttcttcttcgccatgttgacggtgttc
cagtgcatcaccatggaggggtggaccgacgtcctctactggatgaacgacgccatcggg
tttgagctgccctgggtttatttcgtcagtctggtgattttcgggtcgttcttcgttctc
aacctggttctgggagtcctcagcggagagttcagtaaggagagggagaaggcgaaggct
cggggagatttccagaagctgagggagaagcagcagatggaggaagatctgtgtggatac
atggactggatcactcaggctgaggacatggacgaactggacgaggacggaaacccacgt
ccgtctctgggagatctgtcggataagaagagagggaagttcggatggttcagtcactcc
aatgaaacacacgcaagtcttcctgccagtgaaacagcgtctgaaaacactgaaaacatc
gatgaggaacacaccaactgctgccaggcctgctgctctcggatgatgaagatcggctgc
tgtcggacgctgcgtcggtggaatcgagtctgtcgcaggaactgtcgcactgccgtcaaa
tcggtgacgttctattggctggttctgctgctcgtcttcctcaacacctccctcagtgcc
tctgagcactacaaccaacctgattggctgacacaagtgcaagacatcgccaacaaggtg
ctgctgtctctgttcacggtggagatgctgctgaagatgtacagtttgggtttggctcat
tacttcgtggcgttctttaaccgcttcgactgtttcgtggtgtgcggcggcatcatggag
accatcctggtggagctggagatcatgcctcctctggggatctcggtgctgcgctgcgtc
cgcctgctgaggatcttcaaggtcacacgccattggacggctctgtccaacctggtggcg
tctctgctgaactccatgaagtccatcgcctccctgctgctgctgctcttcctcttcctc
atcatcttcgctctgctcggcatgcagctgttcggagggaagttcaactttgacgagacg
cagaccaaacgtagcaccttcgacgccttcccgcaggcgctgctcacctgcttccagatt
ctgaccggtgaggactggaacgtggtcatgtacgacggcatcatggcgtacggagggccg
gtgtttccagggatgatcgtctgcgtttactttgtcatcctcttcatctgtggtaactac
atcctgttgaacgtcttcttggccatcgccgtggacaacctggcaggaggagacggagac
gacaagaagaaagagaagaagacggagggagcggaggagggggaggctggagtagaagaa
ggagaagaagaggaagcgaaggtggacatcgatgaagacaccgagtacgaggaggaggag
gagcttcctgaaggagaagacgatggaggagtccagttgaagatggccgacctggctcct
cctaaagagaaggttcttccaatcccagaaggcagtgcgtttttctgcctcagcaaaaca
aaccccatccgtgtggcctgtcacactctgatccaccaccacatcttcaccaacctcatc
ctcgtcttcatcatcctcagcagctgctcattggctgccgaggatccaatcagagcgcac
tccttcaggaacaacattctgggttatgcagactacgccttcacctccatcttcaccgtg
gagattctgttaaagatgacggtccacggagcgttcctccatcagggctccttctgtagg
aactggttcaacctgctggatctgctggtcgtcagcgtgtctctggtctccttcttcctg
cactccagtgccatctctgtagtgaagatcctccgagtcctgcgagtgctccgacctctg
agagccatcaacagagccaaaggactgaagcatgtggtgcagtgtgtgtttgtggcgatc
aggacgatcgggaacatcatgattgtcacgacgctgcttcagttcatgtttgcctgcatc
ggagtccaactcttcaagggcaaattttatcgctgcacagacgaagccaaacacactcct
gaacagtgcaaagggaccttcgtggtgtataaagacggagacgtgaacctgccgatggtc
agagagaggatctggcagaacagtgactttaactttgataacgtgttgatggggatgatg
gcgctcttcaccgtctccactttcgagggctggcccgcgctgctgtataaagccatcgat
gctaacggggagaactctggtcccatctacaactaccgggtggagatctccatcttcttc
atcgtctacatcatcatcatcgccttcttcatgatgaacatctttgtgggttttgtcatc
atcacgttcagagagcagggagagcaggagtacaagaactgtgagctggacaagaaccag
cgtcagtgtgtggagtacgctctgaaggctcagccactgaaactttacatcccaaagaac
ccggttcagtataagttctggtccatcatcaactccacaggatttgagtacgtcatgttc
gtcctcatcctgctcaacaccgttacactggctgtccagcactacgaacagtctaaaacc
ttcagctacatcatggacatcctcaacatggtgttcaccggactcttcacggtggagatg
ctgctgaagctgctcgctctcagactcaggcattactttgtggacgcctggaactcgttt
gacgctctgatcgtggtcggcagcgtcgttgacatcgtggtcactgagttcagcagtggg
gaggacagctctcgggtgtcaatcaccttcttccgtctctttcgagtgatgcgattggtc
aagctgctgagtaaaggagaggggattcggacgctgctgtggacattcatcaagtcgctg
caggctctgccgtatgtcgctctgctcatcgccatgatcttcttcatctacgccgtcatc
gggatgcagacctttgggaaggtagcgatgcaggatcacactcagatcaacagaaacaac
aacttccagacgtttcctcaggctgttctccttctcttcaggtgtgccacaggtgaggcg
tggcaggagatcatgttggccagtctcccaggtaaacgctgtgaccccgagtcagactac
gaaccaggagaagagttcagctgcggcagcaacttcgccatcgtttattttatcagcttc
ttcatgctgtgtgctttcctgatcattaacctgtttgtcgctgtcatcatggacaacttt
gactatctgacacgtgattggtcgattctgggaccgcatcatctggacgaatttaagagg
atctggtctgaatacgatccagaggccaagggtcgtataaagcacctggacgtcgtggct
ctgctcaggaggattcagcctcctctgggttttgggaaactgtgtcctcacagagtggcc
tgtaagcgcctcgtagcgatgaacatgcctctgaacagtgacgggatggtgacctttaac
gccacgctcttcgctctggttcgcaccgccctcaagatcaagactgaaggtaaccccgac
caggagaacgaggagctgagggggatcatcaagaagatctggaagaggatgaaaccaaaa
ctcctggatgaagtgataccaccacatgaagaggaggaagtgacagtcgggaagttttat
gcgaccttcctgattcaggattacttcaggaagttcaggaagaggaaagagaaaggaaat
ctgacgggagagccagacgctaccaacccgtctgctgtccagctgtgtaaagctggtctg
aagactctgcaggatctcggtccagagatgcgtctggctctgaacgaggacctggaggaa
gaggatgaggccatgatggaggatgaagagatggaggaggacgctgcgtatgagggtgaa
aatggcttcggaccagagaaagatcgccgaggctccatactgaccacgcccactggtcct
ggcggtgtggtgggcgatggcggcgtgtctaatggaggtctggttcaccgggtcggctct
ctcaccaagatgccaaatggcagcgaacgtgatgaacatattcgccgtggagacaacatg
aggtcatccatcaatcatcaccatcagcgccgcccatcagtgaggaacggcctgctggac
cacaagagaccgtcgtaccacaaatacgcaaggagggactcgagggacaggtactggagg
aacggagacatggaggcgtacggagagcagggttactacagcagagaggaggacaacgac
agcatcacctccagagacagacattaccctgaagagcctcctctgtacagagaccactac
gatggccacgccccctacaccaacagtagctatggtaacggatacaacgagggcaggagg
accaccaggagacgccttcttcctgccacgcccacaggtcggaagccatcattcaacatc
cagtgtctgaggaggcagggcagcagtgacgacctgcccatccctgggacgtaccacccc
acctcccctccacgccgcacacgcacacagaccttcagcagttacgagtctcgtcactcc
tccggtcgctcctcagcagcctcctcggcgtcctgggcaaacccgtgtccgcggcgtggt
cgcctcctctacgctccgctcatcctggtggaggaggaaggcagaggagaggtgaagaag
ggaggagcaggaagaggtgtcagtgtgacgggtgcagcacccagaccggcctggtacgga
ggccctgcagggacatcagctcctcctccgtacagagcgtacaccaccctcagagtcccc
tcgcagctcggcgctcagctcacagagaaacgaggctcagccgacagtctggtggaggcg
gttctgatctccgagggtctcggtctgtacgcccgggatccaaagttcgtggcgtttgca
aagcgggagatagcagatgcctgtcacatgacggtggacgagatggagtctgctgccagc
gacctgctcggcaccgggagccacagtttccttagcagcgttgccgctgaccccgccgca
ctctacagtgatgaggagccaatcaggacaggccgtgacgaggatgagctggccgacgaa
atgacctgtgtgacatcattttga
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integrated database retrieval system
