Epinephelus lanceolatus (giant grouper): 117265590
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Entry
117265590 CDS
T07331
Symbol
chd4b
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117265590 (chd4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117265590 (chd4b)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117265590 (chd4b)
Chromatin remodeling factors
NuRD complex
117265590 (chd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
ResIII
HDA2-3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
117265590
NCBI-ProteinID:
XP_033496041
LinkDB
All DBs
Position
14:complement(16071947..16098869)
Genome browser
AA seq
1984 aa
AA seq
DB search
MSGSEDDREDFGAADEHSLLHAGEDEPEDAVSDVDEVPKSKKKKKAKKSSRESRSSKRQR
PIREELPVSSPEHLMGAEAAERDAEEGGVRSESEGSDYAPGKKKKKRSSSAKDKKKGGAA
AEKGGSSNSKSKRKDPEPEDDEDDDDDCQPKSSTQLLEAWGMKDIDHVFTQEDYSSLTNY
KAFSQFVRPLIAAKNPKIAVSKMMTLMMAKWREFSTNNPLKGCATANAALAAANVAAAVE
NMVVAGTDGGAETGGAASPTPAPAPAATPTPAVPPAAPAPPLRKAKTKEGKGPNARKKSK
SASKPPPKPKPKKVAPLKIKLGGLNSKRKRSSSDEDDPDVDSDFDDGSFPVSDGSNRSSR
PKKKPKSAKKKKKVETEDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEK
APEGKWSCPHCEKEGIQWEARDDLSEAEGEDEEDRRDEGVEEEDDHHIEFCRVCKDGGEL
LCCDTCPSSYHIHCLNPPLPEIPNGEWICPRCKCPQMKGKVQKVLTWRWGEPPAPTPVPR
PADLAADAPDPPPLAGRREREFFVKWCNMSYWHCSWVLELQLELNCQVMFRNYQRKTDMD
EPPPVDFGGEGDENKSTKRKNKDPLFIHMEEEFYRYGVKMEWLMIHRVLNHSVDKKNNIH
YLIKWRDLPYDQSTWESEDMDIPEYDTYKQTYWNHRELMMGDEGRPVKKLKKTVKVKKAE
RPPANPVVDPTIKFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMGLGKT
VQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRE
NEFSFEGNAIRGGKKASKMKKDSTVKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRL
KNNQSKFFRVLNNYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIA
KEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKFILTRNFEALN
TRGGGNQVSLLNVVMDLKKCCNHPYLFPAAATEAPKLPNGMYEGNALTKSSGKLMLLQKM
MRKLKEGGHRVLVFSQMTKMLDLLEDFLENEGYKYERIDGGVTGNLRQEAIDRFNAPGAP
QFAFLLSTRAGGLGINLASADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTKA
SVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEIGEGDNKE
DDSSVIHYDDQAIDRLLDRNQDATDDTELQSMNEYLSSFKVAQYVVKDEDDEEEEVEREV
IKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRTRKPVNYNDGSQEDRGIRQDWQED
QSDNQSDYSVASEEGDEDFDERSEANARRPNRKGLRNDRDKPLPPLLARVGGNIEVLGFN
ARQRKAFLNAVMRYGMPPQDAFTNQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAET
FADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHVNGQWSMPWMAELEENKRAAALAAGE
DPKTPSTGTPADTQPNTPVPEDLSKSEDKEDMKKEGEDGKGTKKADDPEIIEIPDESEKS
PVLEKKDEEVESAAGKEEKEKETGNGDEGKEKEAEDMSKEKEEKDKTLETEKDTPAEVKG
EGSDGKTDSDEDKSKAEEGKDEKMDTSPQTEEKKEQKEEKDAVKPDETGKLQNGENTKEG
TTAAPVVNVSEEKKKATKQRFMFNIADGGFTELHSLWQNEERAATVTKKTFEIWHRRHDY
WLLAGIIQHGYARWQDVQNDVRFAILNEPFKGEMSRGNFLEIKNKFLARRFKLLEQALVI
EEQLRRAAYLNMTEDPAHPSMALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLK
QLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLASRGPDVPTQNQSQTSQQM
QVPR
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagcgaggatgacagggaagactttggagccgcggacgagcactcacttctc
cacgcaggtgaggacgagccagaggatgctgtgtctgatgtagacgaggtacccaagtcc
aagaagaagaagaaagccaagaagagcagcagagagagccggagcagcaagaggcagaga
cccatcagagaggagttgccagtcagctccccggagcacctgatgggagcagaagcagca
gagagagatgcagaagagggaggtgtacggtcagagagtgaaggaagtgattatgcccct
gggaagaagaagaagaagcgctccagctctgccaaagataagaagaaaggaggtgcggca
gcagagaaaggaggctcgtccaactcgaagagcaaacgcaaagatccagaaccagaagat
gatgaggatgatgacgacgactgccagcctaagagctccacccagctgctggaggcctgg
ggcatgaaagacattgaccacgtctttactcaggaagactacagctccctcaccaactat
aaggccttcagccagtttgtcaggcctttaattgcagctaagaaccccaaaattgctgtg
tccaagatgatgactctaatgatggctaagtggagagaattcagcaccaacaaccctctc
aagggctgcgccactgccaacgcagccctcgcagctgccaatgtggctgcagctgtggag
aacatggtggtggcagggacagatggaggggcagagaccggtggtgccgcctcacccaca
cctgctcctgctcctgccgctactccaacacctgctgttcccccagcagcccctgcaccg
ccactccgcaaggccaagaccaaagagggcaaaggtcccaatgctcgcaagaaatcgaag
tccgcgtctaagcccccaccgaagcccaaacctaagaaggtggctccgctcaagatcaag
ctaggtggcctcaacagcaagaggaagcgctcctctagtgatgaagatgaccccgatgtt
gacagtgacttcgatgacgggagtttccctgtctccgatggctccaaccgcagcagccgt
cctaagaagaaacccaagagtgcgaaaaagaagaagaaagtggagacagaggatggcgat
ggctacgagacagaccaccaggactactgtgaggtgtgccagcagggaggagagatcatt
ttgtgtgacacctgtcccagagcctatcacatggtctgtctggaccctgacatggagaag
gcccctgagggcaagtggagctgcccacactgtgagaaggaggggatccagtgggaggcc
agggatgatctctctgaggctgaaggggaggatgaagaagacaggagggatgaaggggtg
gaggaggaagacgaccaccacattgagttctgccgggtgtgcaaggatggaggggagctg
ctttgctgtgacacctgcccctcctcctaccacatccactgcctcaaccctcctctcccc
gaaatccccaatggagagtggatctgcccccgctgcaagtgtccacagatgaagggcaaa
gtccagaaggtcttaacatggagatggggcgagccgcccgcccccacgcctgtccctcgg
cctgctgacctcgctgctgatgctcctgatcccccgccactggcaggccgcagggagagg
gagttctttgtcaaatggtgcaacatgtcctactggcactgctcctgggttctggagcta
cagctggagctgaactgccaggtgatgttccgtaactaccagaggaagactgacatggac
gaaccgcctcctgtggattttggaggtgagggcgatgaaaacaaaagcaccaagaggaag
aacaaggatcctctctttatccacatggaggaggagttttaccgctatggagtcaagatg
gagtggctgatgatccaccgcgtcctcaaccacagcgttgataaaaagaacaacatacat
tacttgatcaaatggagagatctgccctacgaccagtcaacctgggagagcgaagacatg
gacatcccagagtatgacacctacaaacagacatactggaatcacagagagttgatgatg
ggtgatgagggcagacctgttaagaagctgaagaagacagtcaaagtcaagaaggcagag
cgtccacctgctaatccagttgtagatcccaccatcaagtttgatcggcagcccgactac
ctggacagcacaggaggcactctgcatccctaccagctggaggggttgaactggctgagg
ttttcttgggctcaggccacagacacaatcctggctgatgagatgggtttaggaaagact
gttcagactgctgtcttcctctattcattgtacaaggagggtcactccaaaggtcccttc
ctggttagtgctccactgtccaccatcattaactgggagagagagtttgagatgtgggcc
cctgacatgtacgtggtgacctacgtcggtgacaaagacagcagggctgtcatcagagag
aacgagttctcctttgagggaaacgccatccgaggtgggaaaaaggcatccaagatgaag
aaagactcaacagtgaagtttcacgtcctgctgacatcctatgagttgattactattgac
caggctgtgctgggctctattgaatgggcctgtctggttgtggacgaggctcacaggctg
aaaaacaaccagtccaagttcttccgagtgttgaacaactatccactgcaacacaaactg
ctgctaaccggcactcctcttcagaacaacctggaggagctcttccacctgctgaacttc
ttgacaccggagagattcaacaacctggaagggttcctggaggagtttgcagacattgcc
aaagaggaccagatcaagaagctccatgacatgctgggaccacacatgctcaggaggctg
aaggccgatgttttcaaacacatgccttcaaagactgagctcattgttagagtggagctg
agccccatgcagaagaaatactacaagttcatcctgacacgtaactttgaggccctgaac
actcgcggaggaggaaaccaagtctctctgctcaacgtggtgatggacctgaaaaagtgc
tgcaatcacccctacctctttcctgcagccgccacggaggctccaaaacttccaaatggc
atgtatgagggtaatgctctgaccaagtcttcaggaaagctgatgctgcttcagaagatg
atgaggaagctgaaggagggaggccacagggtgctggtcttctcccagatgaccaaaatg
ctggacctgcttgaggacttcctggagaacgagggatacaaatatgagagaattgacgga
ggagttacgggcaacttgagacaggaggccatcgaccgctttaatgctcctggtgctccc
cagtttgctttcctcctctctaccagagctggtggattgggcattaatcttgcctctgct
gacaccgtcatcatctatgactctgactggaacccccacaatgacatccaggcgttcagc
agagctcaccgtattggccagaacaggaaagtgatgatttatcgcttcgtcaccaaagcc
tctgtggaggagaggattacacaggtggcaaagaagaagatgatgctgactcatctggtg
gtgcgacctggtctcggctccaagacaggttccatgtccaagcaggagctcgatgacatt
ctcaagtttggaactgaggagttgtttaaagatgaaatcggagagggggacaacaaagaa
gatgacagcagtgtgatccactatgatgaccaggccattgaccgcttgctggacaggaac
caggacgctacagatgacactgagctccagagcatgaatgaatacctcagctcctttaaa
gtggcccagtatgtggtcaaagatgaagacgatgaggaggaggaggtggaaagggaggta
atcaagcaggaggaaagtgttgatcctgactactgggagaagctgctgcgtcaccactat
gagcagcagcaggaagacctcgcccgaaatctgggcaaaggcaaaagaactcgaaagcca
gtcaactacaatgacggctcccaggaggaccgaggtataagacaggactggcaggaggat
cagtccgataaccagtcagattactctgtggcctcggaggagggcgacgaggactttgat
gaacgtagtgaagcgaacgcccgcagaccaaaccgcaaagggctgaggaacgatcgggac
aaacctctgcctccgctgctggctagagtgggcggtaacatcgaggttttgggcttcaat
gcacggcagagaaaggctttcctgaatgctgtgatgcgttatgggatgcctccccaggac
gctttcaccaaccagtggctggtcagggacctccgcgggaagtctgagaaagaattcaag
gcctatgtgtctctgttcatgcgtcacctttgtgagccgggggctgatggagctgagacc
ttcgcagatggcgtcccacgtgagggtctgtcgaggcaacacgtgctcacccgtattggt
gtgatgtcactcataaggaaaaaggtgcaggagtttgagcatgtgaacggtcagtggtcg
atgccctggatggccgagctggaggagaacaaaagggctgcagctttggctgcaggtgaa
gacccaaagactccatctactgggacccctgcagacacacagcccaacactcctgtccca
gaggatttatctaaatcagaggacaaggaagacatgaagaaggagggtgaggatggcaaa
ggaaccaagaaggccgatgatccggagattattgaaatcccagacgagtctgaaaaatcc
cccgtcctggagaagaaagacgaagaggtagagtccgctgcagggaaggaggagaaagag
aaggagacaggaaatggagatgaaggcaaggagaaggaggctgaagacatgagcaaggag
aaggaagagaaggacaagactttagagacggagaaggacactcctgctgaggtcaagggt
gaaggctcggacggcaagacggattcagatgaggacaaatccaaagctgaggagggaaaa
gatgagaagatggacacaagtccgcaaacagaggagaagaaagagcaaaaagaggagaag
gatgctgtgaaaccagacgagactggcaaactgcagaatggagagaacaccaaagaagga
acaacagctgcgccggtggttaacgtcagtgaagagaagaaaaaagccaccaagcagagg
ttcatgttcaacatcgctgatggaggattcacagagctccactctctgtggcagaatgaa
gagagggcagccaccgtcaccaagaagacctttgagatttggcaccgtcgccatgactac
tggctgctggctggaatcatacaacacggctacgctcggtggcaggatgtgcagaacgat
gtgaggtttgccatcctcaatgagcccttcaaaggggagatgagcagaggaaacttcctg
gagatcaaaaacaagtttctggcccgcaggttcaagttattggagcaggcgttggtgatc
gaggagcagttgcgcagggcggcttacttgaacatgacagaggacccggcccacccctcc
atggccctcaacactcgcttcagtgaggtggagtgtctcgccgagtcccaccagcacctc
agcaaagagtcgatgtctggaaacaagccagccaatgcagttctgcataaagttctcaaa
cagctcgaggagctgctgagcgacatgaaggctgatgtcacccgtctcccggcaaccatt
gccaggataccccctgtcgccgtgcggctgcaaatgtctgagaggaacatcctcagccgg
ttggccagccggggccccgacgtccccacacagaaccagtcacagacctcgcagcagatg
caggtgccccgctga
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integrated database retrieval system
