Euzebyella marina: D1013_03695
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Entry
D1013_03695 CDS
T05677
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
emar
Euzebyella marina
Pathway
emar02020
Two-component system
emar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
emar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D1013_03695 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D1013_03695 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emar03021
]
D1013_03695 (rpoN)
Transcription machinery [BR:
emar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D1013_03695 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Ribosomal_S10
RecX
SurA_N_3
RelE
Motif
Other DBs
NCBI-ProteinID:
AYN66548
UniProt:
A0A3G2L2T2
LinkDB
All DBs
Position
complement(898749..900209)
Genome browser
AA seq
486 aa
AA seq
DB search
MLKQHLQFKLSQKLSPQQIQLMKLIQLPTQAFEQRLKQELEENPALEGGKEEVDTYEDEF
ADNYDNADTDAETINTDDINIDDYLSDDEIPDYRTKANNYSSDDEEKNVPYAAGVSFNQF
LLNQLNTVYLSDEEWGIAEFLVGSVDESGYIRRPLTDILDDLAFTQNIYTDEETIEKVLK
IVQKLDPPGVAARSLEECLIIQLKRKEASPPVELAITVLEKSFEQFTKKHYKKLLQKHNI
TEEQLKDAISEIEKLNPKPGGSYSGNNRMVEHVVPDFSIRIVEGELELSLNGRNAPELHV
SKEYSNMLKGYKDAKNKSKSQKDTILFIKQKLDAAKWFIDAIRQRQQTLFVTMNSIMNYQ
EEYFLTGDERNLRPMILKDIADEIEMDVSTVSRVANSKYVDTPYGTKLIKEFFSESMKND
QGEDVSTKEIKKILETVIGEESKKKPLTDDKLAAILKEKGYPIARRTVAKYREQLDIPVA
RLRKQI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacaacacttacagtttaaattatcgcaaaaattatctcctcagcagatacag
ctgatgaagttgattcaattgcctacccaggcatttgagcagcgacttaaacaagaactg
gaagaaaatcccgcattggaaggtggcaaagaagaggtcgacacctatgaagacgaattt
gccgacaattatgacaatgccgataccgatgccgagaccatcaataccgacgatatcaat
attgatgattatttgagtgatgacgagatacctgattacagaacaaaagcgaacaattac
agttctgacgatgaggaaaaaaacgttccctatgccgcaggggtatctttcaatcaattt
ttgttgaaccaactaaataccgtttatctcagtgacgaagagtggggtattgccgagttt
ttggtgggaagtgttgatgaaagcggatacattcgtcggccactaacggacatattagac
gacctagcttttacccaaaatatttatacggatgaagagactattgagaaagttcttaaa
atagttcagaaacttgatccgccgggcgtagcggcacgttctctagaagaatgcctaatt
attcaactcaaaagaaaagaagcctctccgccggtagaactggccataacagtacttgaa
aagtcttttgagcagtttaccaagaagcattataaaaaacttctacagaaacataacatt
acggaagagcaattaaaggatgccatttcggaaattgaaaagttgaatccgaaaccgggt
gggtcatattcaggcaataaccgtatggtagagcacgtggttcccgatttttccatacga
atcgtagagggcgaactcgaactttcattgaacggccgtaatgccccagaattacatgta
tcaaaagaatacagtaatatgttgaagggatataaggatgccaaaaacaagtcgaaatcg
caaaaagatactattctttttatcaagcaaaagctcgatgccgccaaatggtttatagat
gccattcgccaaaggcaacagacgctattcgttaccatgaattctattatgaactaccaa
gaagaatattttcttactggagacgagcgaaacttgcgcccgatgatcttaaaggatatt
gccgatgaaattgaaatggatgtttcgaccgtttcaagggtagccaacagcaaatatgtt
gataccccttatggcactaaactcatcaaagaattcttctctgaatcaatgaaaaacgac
caaggggaagatgtgtcgaccaaggaaataaagaaaatattggaaaccgttatcggtgaa
gaatcgaagaaaaaacccttaacggatgataaattggccgctattttaaaagaaaagggc
taccctattgcccgtagaacggtcgccaaatatcgagagcagctggatatacccgttgcc
cgattgcgcaaacagatttaa
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