Eublepharis macularius (Leopard gecko): 129332410
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Entry
129332410 CDS
T09084
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
emc03009
]
129332410 (PDCD11)
Ribosome biogenesis [BR:
emc03009
]
Eukaryotic type
90S particles
Other 90S particles
129332410 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
TPR_14
Suf
TPR_19
OSK
Motif
Other DBs
NCBI-GeneID:
129332410
NCBI-ProteinID:
XP_054839484
UniProt:
A0AA97JM22
LinkDB
All DBs
Position
6:68295488..68344408
Genome browser
AA seq
1813 aa
AA seq
DB search
MSSLEENFPRGGTQKTAREGKAAIQPTVDQDNLFKTQHEERTPKRKKKQQDQAKPKKLKT
EKKAVVKTIPKDFELLTAESLSEGMLVLGCVKEVNEFELTISLPNGLSGNVQVTCICEAY
NKMLSEQVATDKFVKDLSPLSDLFSPGMLLRCAVVGVNKGAEGHHSIQLSINPKDVNKAL
NTAALRTGMLISGCISSVEDHGYLIDIGVHAAKAFLPREKAQSYFLAKEKGDELKIGQYL
NCLIDEVKNSGRIIRISISQLEVAAAIATEVQDWTLRNLLPGLVVKALIQEVTPLGISLS
FLSSFTGIVDFMHLGSMKSRNYSPGQMVKACILSVNPTSKAIHLTLRPVFLQPGTQLGHL
SSGRIGTVVVDSRVKSFHKNTGAVFTLDDGTLAFAHLKHLSDTPKSFKPESFKPGSKHKC
RIIDYSPIDDLLLLSLKKRIIDIPFLRYHDIHPGQVVEGSVFSLKNIGMQVKVTAHIKGL
VPHLHLADVVLKQPEKKYSIGSTVKSRVLACNPDTKTLILTLKKTLVNSKLPILASYKDA
KPGLVTHGFVVCAREFGCIVKFYNDIKGLVPKNELGVGPITIPQEAFYEGQVVKVIVLKC
EPEQEKLLLSFKLTDNALAEDSTAEQVSKKQEMTYETGQIADVKILEKKENGLEVKILPN
DVSAYLPIMHLSDHVTSCKLWWHWLKGGEILRSVICLQEKEGHITMSRKPAIISAIEGEH
VVKNFSDIQPGLLLKGYVRNIMPYGVFVEFPYGLMGLAPKSAMSDKFVTDTKDHFVIGQT
VVAKVTSIDEEKQRFLLSLKLSDCSSEDSVSESFSLLSQYFKELQEIKNIMSKRDDSSVA
QKLCELKPGQRLQLVVQEVKADGSALFSGTCASGLTVMATHSHFEGKKIVTGDQAAAVIL
HVDFLKSKVFVSLQEELLSPKQKPLTVDSQHPAVLQHVASEYAVASLVETGQLIAIPLAS
HFNDTFRFDSEKMKVGQSVMVILKTVEAGDHGFLLAVQSPKKRRNIIRLRRESKTLEETS
AVVQHSLCMGDMVTGTVKSVKPTFVLVALDDKLTGNIHASQILDDVPIGTFPTSKLRVGQ
RVTARVIGGRDVKTHRYLPISHPCFTQTIPELSVRPRELKGESNTALCPDDCNTEEALKS
FKPGQVVTCFVKKYSTIKKWLEVDVTSNVRGRVQQLLLSPNTKVLKHPEKHFKNGQALAA
TVVGSDITKTKLCLSLTGIHSLEKRTITLGCVKKVIPHVGLIITLPFGKTGKASLFHLSD
SFVEQPVEGFSTGQVVKCCVLSSNDNAMEVSLRQSRVNPKSHGKVEDAEIMSLENVQKGQ
LVRGYVTSVTPAGIFFGLSDSVVGRIPLQYITHLFVPDQSLYAKFVHVGQLLTAKVLSIN
KGENHVVLSVLPDDTGKPSIIPESLGLLQSEKKLKKCKRRHSERGQEIKQGKKRGRCTEE
DDSGIDIYCREEEEEEKNEKSSKLKREIPRLTVSTAFTWEEDLNVLDTTMLREREQSSAS
EEEEEDTQSTTKKQTRKKKDLEKQRAEKELAKLEAALMDPTRQPQTADDFDRLVLGNPDS
SILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGIEEALM
KVFERAIQYNEPLKVFQQLADIYAGSEKYKQADDLYNTMLKRFRQEKSVWVKYTDFLLKR
GQVEAAHRLLPRALKCLPNKDHIDVISKLAQLEFRFGDPEHGKTIFENTLSTYPKRTDIW
SIFIDMMIKHGSQKEVRDIFERVIHLSLAPKKMKFFFKRYLEYEKTYGTAEAVQAVKAAA
LEYVESKSSLPES
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttagaagagaacttccctcgagggggcacacagaagacagcacgagaagga
aaagcagccatacagccgacagtagatcaggataatttattcaaaacacagcatgaagag
cgaactccaaaaagaaagaaaaagcagcaagatcaagcaaagccaaaaaaactcaagaca
gagaagaaagcagttgtaaaaaccattccaaaggattttgaacttctgacagctgagtct
ctctctgaaggaatgctggtcttgggctgtgtgaaagaggttaatgagtttgaacttaca
atcagcttaccaaatgggctctctggaaatgtacaggtgacttgcatatgtgaagcttac
aacaaaatgctgagtgagcaggtggccacagataagtttgtaaaggatttgagtcctctt
tcagaccttttctcaccaggaatgcttctcagatgtgctgtggttggtgtcaataaaggt
gctgaaggacatcacagtatacagctatcgattaaccctaaagatgtcaacaaggctttg
aacactgcagctctaagaacaggcatgctcatctctggatgcatctctagcgtggaagat
catggttaccttattgacataggagttcatgcagcaaaagcatttctccctcgagagaaa
gcccagagttacttcttagcaaaggagaaaggggatgaactgaagataggacaatatcta
aactgccttattgatgaagtaaagaacagtgggaggataatccgtatttccatcagccag
ttggaggttgctgcagccattgcaacagaagtgcaagattggacactccgtaatttgtta
ccagggctggtggtgaaagccctgattcaggaggtgacacctttgggaatttctcttagt
tttctgtcttcttttactggcattgtggacttcatgcacctcggttctatgaaatcaaga
aactactctccaggtcagatggtgaaagcctgtattctctcagttaatcccacctccaag
gcgatacacctgactttgcgcccagtttttcttcagcctggtactcagcttggccatctc
tccagtggtcggattggcacagtagtggtggattcaagagtgaagagtttccacaaaaat
actggtgctgtcttcacattggatgatggtaccctggcttttgcccatctaaaacatctt
tcagatactcccaaatctttcaagcctgaatcctttaagcctggaagcaagcataagtgc
cgaattattgactatagccctattgacgatctgttactgttatctctcaaaaagcgcatt
attgatattccgttcctgagataccatgatattcatcctggacaggtggtggagggctct
gtattttctctgaagaacattggcatgcaagtaaaagtgactgctcacatcaagggcctg
gtacctcacctgcatctagctgatgtggttctgaaacagccagaaaagaaatacagtata
gggagcactgtcaaatcccgggtgcttgcttgcaatcctgacacaaagacgcttattctg
acacttaagaaaactcttgtcaattcaaaactccccattcttgctagctataaagatgca
aagccaggtctagttactcatggatttgttgtttgtgctagagagtttggctgtattgtg
aagttctacaatgatataaaaggcttggtccccaaaaatgaacttggtgtgggacccatt
accattcctcaggaagctttctatgaaggccaggtggttaaagtgattgtcttaaaatgt
gagcctgagcaagagaaactgctgctgtcattcaagttgactgataatgctcttgctgag
gactctacagcagaacaagtttcaaagaagcaagaaatgacatatgaaactggacagatt
gctgatgtgaaaattctagagaagaaagaaaatggcttagaagttaaaatcttgccaaat
gatgtttctgcctatcttcccataatgcacctctctgatcacgtgaccagttgtaaactc
tggtggcattggctcaaaggtggcgaaatcctacgcagtgttatatgccttcaggaaaag
gaaggccatattaccatgagcaggaagccagcaataatctcagctatagagggggaacat
gtggtgaagaacttctctgacattcagcctggattgctgctgaagggctatgtgagaaac
attatgccatatggcgtgtttgtggagttcccatatggtttgatgggtctagcacccaaa
tcggcaatgagtgataaatttgtgacggataccaaggatcactttgtgattggtcagact
gtggttgccaaggtaacgagcattgatgaggagaagcaacgcttcctgctctctttgaaa
ttgtctgactgctcctctgaagattctgtttctgagagcttctccttgctatcccagtac
tttaaggaacttcaagagattaagaacattatgagcaaaagagatgattctagtgtagcc
cagaaactctgtgaactgaaacctggacagaggctgcagctggtggttcaagaagtcaag
gcagatggctcagcgctgttcagtggcacatgtgcttctgggttgactgtaatggccact
cacagccattttgaaggtaaaaaaattgttacgggtgaccaagcagcagctgtgattctc
cacgtggatttcctgaaatcaaaggtttttgtttctcttcaagaagagcttctttccccg
aaacaaaaaccgttaacagtggactctcagcatccagcagtgctgcagcatgtggcttca
gagtatgcagttgcttccttggtcgaaacaggtcaattgattgccattcctttggcctcc
cacttcaatgatacattccggtttgattctgaaaaaatgaaggtgggacagtcagtcatg
gtgattctgaagaccgtagaggcaggcgatcatgggttcttgcttgctgtacaaagtcca
aaaaagagaaggaatataatcaggttacgacgggaatccaagacactggaggagacatca
gccgtggtgcagcactctttgtgcatgggagatatggtcacaggaactgtgaagtctgtc
aagcccacctttgtcctcgtggcacttgatgataagctaacaggcaacatacatgcatcc
cagatcttggatgatgttcccataggcacctttcccacatcaaagctaagggttggacag
agggtcactgctcgagtcattgggggtcgagatgttaaaactcacaggtatttgcccatt
tctcatccatgcttcacccagaccatcccagagctcagtgtccgaccaagggaactgaaa
ggagaaagcaatacagccctgtgtcctgatgattgcaacacagaagaggcattaaaatct
ttcaagcctgggcaggtagtgacatgctttgtgaagaagtatagcaccataaagaaatgg
ctggaagtggatgttacttctaatgttagagggagagttcaacagttgctcctttcccct
aacaccaaggtcttaaaacacccagaaaaacacttcaaaaatggacaggctttggctgca
actgtggtaggctctgacatcactaagaccaagctctgtctgtcactgacaggaattcat
tctctggagaaaagaaccatcaccttaggctgcgtcaaaaaggtgattccacacgttggc
ctgattatcacacttccatttggaaagactggcaaagccagccttttccacttgagtgat
tcatttgttgagcagccagtagaaggtttcagcacaggacaagttgtcaaatgctgtgtc
ctttccagtaatgataatgcaatggaggtgtccctccggcagtccagagtaaatccaaag
agccatggtaaagtggaagatgctgaaatcatgagccttgagaatgttcagaaaggtcaa
cttgtcagaggttatgttacttctgtaacaccagctggtatcttctttggattatcagac
tctgttgtgggccgaatcccattgcaatacatcacccatctctttgtgccagatcagtcc
ttatatgcaaaatttgtacatgtaggacagttgctcactgccaaagtcctcagtataaac
aaaggagagaatcatgtggtgctctcagttctccctgatgacactgggaaaccaagtatt
atcccagagtccctgggtttgctgcagagtgaaaagaagctgaagaagtgcaaaaggaga
cattctgaacgaggacaggaaataaagcaaggaaagaagagaggtcgttgcactgaagag
gatgatagtggcattgatatctattgccgggaggaagaagaagaggaaaagaatgagaag
agctctaagctgaaaagagagattccaaggctgacggtttcaaccgcctttacatgggag
gaagatttaaatgtgctggatacaaccatgttaagagagagagagcagagttctgctagt
gaggaagaagaagaagatacgcagtccacgacaaaaaaacaaacgagaaagaaaaaggat
ctggagaagcaaagggcagaaaaggaacttgccaaattagaagctgccttgatggatcct
actcggcagccccagaccgcagatgactttgaccgcttggtccttggcaaccctgacagc
tccatcctctggttgcaatatatggctttccatctccaggccacagagatagaaaaggcg
agagctgtagctgaaagggccctgaaaacaatatccttcagggaagagcaagagaagttg
aatgtgtgggtagccctgctgaacctggagaacatgtatggcatagaggaagctctgatg
aaagtctttgaaagagcaattcaatacaatgaacccctgaaagttttccaacagctggca
gatatctatgctggttctgagaaatacaagcaagctgatgacctgtacaacacaatgctg
aagcgctttcgccaggaaaagtctgtgtgggtaaaatacaccgatttcctcctgaaaaga
ggccaggtggaggcagctcacaggctcctcccacgcgcactcaagtgtctgccaaacaaa
gaccatatagatgtgatttcaaagctggcacaacttgagttccggtttggagatccagaa
cacggcaagaccatttttgagaacaccctgagcacatacccaaaacgcacagacatctgg
tcaatttttatagacatgatgataaaacatggcagccagaaggaagtacgggatattttt
gaacgagtaatacacctaagcctggcaccaaagaagatgaagtttttctttaaacgctat
ctagagtatgagaagacatacggtacagcagaagcggtccaagccgtgaaggcagcagca
ctggaatatgtggaatccaagagcagtctccctgaaagttga
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integrated database retrieval system
