Eublepharis macularius (Leopard gecko): 129336553
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Entry
129336553 CDS
T09084
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129336553 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129336553 (CNOT6L)
Enzymes [BR:
emc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
129336553 (CNOT6L)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129336553 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129336553 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
Motif
Other DBs
NCBI-GeneID:
129336553
NCBI-ProteinID:
XP_054845683
UniProt:
A0AA97JUN6
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All DBs
Position
10:complement(12999475..13049444)
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AA seq
550 aa
AA seq
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MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLND
NYLTRIPPDIAKLQNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILSLYQDPDGTRKLLNYMLDNLAVHPEQLPPRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEILNWEADIISLQEVETEQ
YFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSEGSEAMLNRVMTKDNIGVAIVLEVHKELFGAGIKPLHTVENQLLIIANAHMHWDP
EYSDVKLVQTMMFVSELKNILEKASGRPGSPTADLNSIPLVLCADLNSLPDSGVVEYLSN
GIVADNHKDFKELRYNECLMNFSGNGKNGASEGRITHGFQLKSAYENNLMPYTNYTFDFK
GVIDYIFYSNTHMNVLGVLGPLDPQWLVENNISGCPHPHIPSDHFSLLTQLELHPPFLPP
VNGIHLPTRR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagatcctcgcagaatttacaccatcatgtcagcg
gaggaggtagccaatgggaagaagtcccactgggcagaattggaaatctcgggtagagtg
cggagtttaagtacgtcactttggtcgctaacgcacttgactgctctacacctcaacgac
aactatctgacccgcattccacctgatattgccaagcttcagaatttggtttacctggat
ctttcctccaacaagctcagaagtttaccagcagaactaggaaacatggtatctctcagg
gaattgcttttaaacaacaacttgttacgagttttgccttatgaacttggccggctgttc
cagctgcaaacactaggtctgaaaggcaatcctttatcgcaagatattctcagcctgtac
caggacccagatgggacacgaaaactattgaactacatgcttgacaatctagcagttcat
ccagagcagctgcctccaaggccgtggattactttgaaagaacgagaccaaatcctgccc
tcagcttcatttaccgtcatgtgttacaacgtattgtgtgataaatatgccacccgacag
ctctatggctactgcccgtcctgggcattaaactgggagtacaggaaaaagggaatcatg
gaagaaattcttaactgggaagcagatatcattagccttcaggaagtagaaaccgagcaa
tacttcaccctctttctgccagcattaaaagatcgtggatatgatgggtttttttctcca
aagtcacgtgccaaaatcatgtccgagcaggagcggaagcatgtggacggttgtgcaata
ttcttcaaaacagaaaagttcacattggtgcagaagcacacggttgagttcaaccaagtg
gctatggcaaactcagaaggatcagaagctatgctgaacagagtgatgacaaaggacaac
attggagtcgctatagtgttagaggtgcacaaagaactgtttggagcaggtataaagccg
cttcatacagtagagaaccagctgcttattatagcaaacgcccatatgcactgggaccct
gaatattcagatgttaaacttgtccagaccatgatgtttgtctctgaattgaaaaatatc
cttgagaaagcctccggcaggcctggaagcccaacagcggatttgaactccatccctctg
gtgctctgtgcagatcttaactcgctgcctgattcaggtgttgtggaatacttaagcaac
ggaatagtagccgacaaccacaaagacttcaaggaactgcgatacaacgagtgtctgatg
aacttcagcggcaatgggaagaacggcgcttcggaagggaggatcacgcacggcttccag
ctcaagagcgcctatgaaaacaacttgatgccttacacaaattacacctttgatttcaaa
ggtgtgattgactacattttttattccaatactcacatgaacgtgcttggtgtcttgggg
cctttagatcctcagtggctggttgagaacaacatcagcggatgccctcaccctcacatc
ccttccgaccacttctcactgttgacgcagcttgagctccacccgcccttcctgcctcct
gtcaacggcatccatttgcccaccaggaggtag
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