KEGG   Eublepharis macularius (Leopard gecko): 129341108
Entry
129341108         CDS       T09084                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:emc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129341108 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:emc03041]
    129341108 (SF3A1)
Spliceosome [BR:emc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    129341108 (SF3A1)
 Complex B
    129341108 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    129341108 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2
Other DBs
NCBI-GeneID: 129341108
NCBI-ProteinID: XP_054852039
UniProt: A0AA97KBN7
LinkDB
Position
13:50389368..50406492
AA seq 799 aa
MPAGPVQAMAPAQPAPPEAKQPEDEPKEETTPAKPVVGIIYPPPEVRNIVDKTASFVARN
GPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAIPKVMQQQQSA
QQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQ
LMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLITKLKKEAENPKEVLDQAC
YRVEWAKFQERERKKEEEEKERERVAYAQIDWHDFVVVETVDFQPTEQGNFPPPTTPEEL
GARILIQERYEKFGESEEVEMEVESDDEDEKQEKTEETPSQLDQDTQVQDMDEGSDEEDE
NQKVPPPPEAPMPPPLPPTPDQVIVRKDYDPKASKPLPPTPAPDEYLVSPITGEKIPASK
MQEHMRIGLLDPRWLEQRDRSLREKQTDDEVYAPGLDIESSLKQLAERRTDIFGVEETAI
GKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKEK
IGPSKPNEMPQPPPLSSAPNIPTSAPPIASVPRPPSMPPPVRTTVVSAVPVMPRPPMTSV
VRLPPGSVIAAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTGYRQGPVSSPAFVP
APPVAPVAAPAPLPPVHPPPPMEDEPSSKKMKSEDSLMPEEEFLRRNKGPVTVKVQVPNM
QDKTEWKLNGQVLVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYN
MISGSVIHLALKERGGRKK
NT seq 2400 nt   +upstreamnt  +downstreamnt
atgcctgccgggcctgtgcaggcgatggcgcctgcccagccagcgccacctgaagcgaag
cagcctgaggatgagccaaaagaagaaaccacaccagccaaacctgttgtgggaattatt
tacccaccaccggaggttaggaatattgtggacaagacagccagctttgtggctagaaat
ggtcctgagtttgaagcccgaatccgtcagaatgagataaataatcccaaattcaatttc
ttgaaccctaatgatccttaccatgcctactaccgacacaaagtcaacgagttcaaggaa
gggaaggctcaggagccctctgcagccatcccgaaggtcatgcagcagcagcagagtgct
caacagcagctcccccaaaaggtgcaggcacaggtgattcaggaaactgttgttccaaag
gagcctcctccagagtttgaattcattgcagaccccccatcaatctctgcctttgatttg
gatgtggtaaagctgacagcgcagtttgttgctcggaatggcagacagttcctcacccag
ctgatgcagaaggagcagaggaactaccagtttgatttcttgcgcccacagcacagtctc
ttcaactacttcaccaaactggtggaacagtacaccaagatcttaatcccacctaagggc
ttaattacaaaactcaagaaggaggcagaaaaccccaaggaagtattggaccaggcatgc
tacagagtggaatgggcaaagtttcaggagcgagagcggaagaaggaagaggaagagaaa
gagagagagcgtgttgcatatgcccagatcgactggcatgactttgtagtagtagaaact
gtggacttccagcccactgaacaagggaacttccctcctcccaccacacccgaggagctg
ggagctcgcattctgatccaggaacgatatgagaagtttggtgaaagtgaagaagtggag
atggaggtagagtcggatgatgaagatgagaaacaagaaaaaacagaggagactccatcc
cagttagaccaggacactcaagtgcaggatatggatgaaggctctgatgaagaagatgag
aaccagaaagttccaccccctccagaagctccaatgccacctcctcttccccctactcca
gatcaagttattgtcaggaaagattatgatcctaaagcatccaagcctttgccacctacc
ccagccccagatgagtatctagtttcccccatcactggggagaagattcctgccagcaaa
atgcaagaacacatgcgaattgggcttctggatcctcgctggctggagcaaagagatcgt
tccctccgggagaagcagactgatgatgaagtttatgccccaggtttggatatcgaaagc
agtttgaaacagttggctgagcgtcgtactgatatttttggtgtggaagagactgctatt
ggcaagaagattggggaagaggagatccagaagccagaagaaaaggtgacctgggatggt
cactcaggcagcatggcccgaactcagcaggctgctcaagccaacatcaccctgcaagag
cagatagaagcgatccataaggctaaggggctggtgcctgaagatgacagcaaggagaag
attggtccaagcaaacccaatgagatgccccagcccccacccctttcatcagctccaaac
atcccgacaagtgctccaccaattgcatctgtaccccgccctccttcaatgccacctcct
gtccgcacaactgttgtcagtgctgttcctgtcatgcctcgtcctcctatgacttcagtg
gttcgtttaccaccaggctctgttatcgctgctcccatgccaccaatcatacatgcccct
cggatcaacgttgttccaatgccaccttctgctccacccataatggctccgcggccccct
cctatgattgtgcccacaggatacagacagggaccagtcagcagtccagcatttgttcct
gcccctcctgttgcaccggttgctgccccagcacctttgcctcctgttcaccctccaccg
cccatggaagacgagccatcttctaagaagatgaagtctgaagacagcctcatgccagag
gaggagtttcttcggagaaacaagggtccagtcaccgtcaaagttcaggttcccaacatg
caggacaagaccgaatggaagctcaacggccaggtgctggtgttcacccttccactctct
gaccaggtttctgttataaaggtgaaaattcatgaagctactgggatgcctgctgggaaa
cagaagctccagtacgagggcatcttcatcaaggactccaattctctggcatactacaac
atgataagtggctcagtgatccacttagcactcaaagaaagaggaggcagaaagaagtag

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