Eublepharis macularius (Leopard gecko): 129343234
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Entry
129343234 CDS
T09084
Symbol
SNRNP40
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129343234 (SNRNP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emc03041
]
129343234 (SNRNP40)
Spliceosome [BR:
emc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129343234 (SNRNP40)
Complex C
U5 SnRNP specific factors
129343234 (SNRNP40)
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GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
eIF2A
Cytochrom_D1
WDR54
WD40_like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
129343234
NCBI-ProteinID:
XP_054855314
UniProt:
A0AA97KH44
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Position
15:complement(42505927..42519396)
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AA seq
359 aa
AA seq
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MIDPQKRKAPGPEMALVAAASAAKKPRHELILGAGPAGGQPPPGALLQTGPPRCSSLQAP
IMLLSGHEGEVYCCKFHPNGATLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN
TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL
WDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSV
TGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKILQGNVHNFEKNLLRCSWSPDGS
KIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPEEPIILSASSDKRLYMGEIQ
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacccgcagaagcgcaaagcgcccggcccggagatggcgttggtagcggcggcg
tccgcggccaagaagccccgccatgagctgatcctgggagcgggacccgccggagggcag
ccgccgccgggcgccttgttgcagacgggtccaccaagatgttcctccctccaggcaccc
atcatgttgctttccgggcatgaaggtgaagtgtactgttgcaagtttcatcctaatgga
gccaccttagcatcagctggatttgacaggctgatcttgctatggaatgtgtatggtgat
tgcgataattatgccaccctgaaaggacatagtggagctgttatggagctgcactacaac
actgatggcagcatgctattctctgcctccacggataaaacagtagcagtgtgggatagt
gagacaggcgagagagtaaaaaggctcaaagggcacacatcgtttgtgaactcttgttat
ccggcgcggcgtgggcctcagttggtttgcacaggcagcgatgacgggacagtaaagcta
tgggacatcagaaaaaaagctgctgttcagacttttcaaaatacttaccaagttttagct
gtcactttcaacgataccagtgaccagataatatctggcggcatcgacaacgatatcaag
gtgtgggaccttcgacagaacaagctaacgtatacaatgagaggacatgctgactccgtc
accggactcagtctcagttcagaaggatcttacttgctttccaatgcaatggacaataca
gttcgcatctgggatgtccggcccttcgcccctaaagagagatgtgtgaagatacttcaa
gggaatgtgcataattttgaaaagaatcttctgcgatgttcttggtcaccagacggaagc
aaaatagcggctggatcggcagacaggttcgtttatgtgtgggatacaacctccagaaga
atcctttacaagctgccaggtcacgctggttcaataaacgaagtggcttttcatccagag
gaaccaatcattctttcggcatctagtgacaaaaggctgtatatgggagagatccagtga
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