Eublepharis macularius (Leopard gecko): 129345226
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Entry
129345226 CDS
T09084
Symbol
SYNM
Name
(RefSeq) synemin
KO
K10376
desmuslin
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
emc04812
]
129345226 (SYNM)
Cytoskeleton proteins [BR:
emc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
129345226 (SYNM)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
129345226
NCBI-ProteinID:
XP_054858239
UniProt:
A0AA97KME7
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All DBs
Position
18:20593163..20617867
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AA seq
1643 aa
AA seq
DB search
MQRAEWDEQSELRELNCRLRDYVLRVRALEEENGRLARELAALRGEEHRAERLRAREEEV
AELRRAVAELRRAGGEAELEREALRRERARLEALGAQVRELRLRRLEPEAGELRRELERL
AADCAALEALLERLRAEHRRLREEQRQQQQQQVRHRHPSRLLALPPPPAPSQRELEDSFA
LVLSWSCEQSLERYEAELRALQELEQRLGAGKEAEQLRLHSERSRRHLEELWRQGQELAA
LGERLEQERLAQVERHGAQRGEYQMIIEALEEEKRFLTVSIAEYLKDYHELLQVKAGLSL
EIATYRTLLEGESSQWILLWEKEHGRKAPQGVRDVLHEYSNRYSAYRQEKGKRAFPAIQN
VDTRYKTPIANMSSSAVYSSRTKPSRIQTAAPGKTLRNDALWLEYRPSTAIKKDTTHQRT
VTDQRQVRTFIPSSVTSREREFRQRTLPESKKAEAVITAKESTEVQKGTTITNTFENAKP
KVMGVSTTSYNLNSSSKETKYERIQEGTDAQVNEQIREVKVMKEEKPFLLPGRDEKERSA
RKVTEPVPAKTEKKLVGAETKVSFEKKMEVKHGTEEEKYTVKEPNLNYSKKKVNLTEDES
PKDGKYVKWEERIRVDTSGKDLPSDIKMDKSSSFLWEKNVTTQSREAAEIPVLSDVHSQD
QLFKNNKTEITLQESKPSVGKQKVDATPKLSRNIPERELNQERVSKEGSPTMDTLLTESI
AENIVSDILKGFVQKSDSGLPLDTKFTFLEKKVSEDGKAKSEVTVQSTVQEDLSISDEFD
LGRFLKKDVKGVGDTKEVLSDAVLEDIISAGLKGREGQGKRTVQVEIVEEPVECAADERT
EFPTPFEVEEAEDTLPGMAGHLYYGGEEKATTSAAQDLKRQQPSVIVSHVEEVSEGDDVV
DEGKYFVSTPEEHPLIHEKDDSSVYGQIHIEEESTIKYSWQDEFLQGAQKRVNEGMGSPE
LIYQVMGGEESAFVSKDEPPVEHIAHAESIVIEREIKIPHEFQTSIKSLFSEESKDPKHQ
LKEALEKLEDNLPESVKQELSALTKEGQAESSSLEVDIKKVEQTKKGGLVTIVAEVSLSE
TLDLDQFNSGYLGEGLAVERESPTQFSATYDTDEHMKPESESYHDGTRKLEIIEVASTPW
TTQAVSSSAKLSSSGGVKSPTSERVVSEGPVFKNLGLDSRSDPSHLQGPFDINRSVRQII
VGPTEIHRTEEVLHEGPFSKTLEFGSGDFEAGGASAGVSRSVQEFTLGPEETQTEEITYR
GPVRKTVGGPENPSQAQFSADSKSTKLVMLGSKQIIEETVFEGPASDFSLDDNSWVPSQT
KGLEETGRSVRHIRIDPKEVRTQQVVYEGPLSEVVEHSSAGDRISVNESVRHIKVGQKET
QAVYEESSTTETEPSHDLDWLLKEGMLDTNSTVRHIKVAPKESMTSEQIIFKGPISKQHL
EFSESGQMFSSEGSARHITSGQKDIWSNERVSYQGSVSESSGISSAGEDTLETEGPTEIS
RSVRHIRLGPVETHAEQIVFQGPIGTVELSPTDGPPENKSLGHIKIGPKETSFTFQMDVT
NVAGGGQEAKFLLSNTKDQPEDAAKGSEREAQTEERSEKSAFNRTVQLQRMVDQRSVVSD
EKKIALLYLNENEEEEEEDGPWF
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgccgagtgggacgagcagagcgagctgcgcgagctgaactgccgcctgcgc
gactacgtgctgcgggtgcgggcgctggaggaggagaacgggcgcctggcgcgggagctg
gcggcgctgcgcggagaggagcaccgcgcggagcgcctgcgggcgcgcgaggaggaggtg
gccgagctgcggcgggcggtggccgagctgcggcgggccggcggggaggccgagctggag
cgggaggcgctgcggcgggagcgggcgcgcttggaggcgctgggcgcgcaggtgcgggag
ctgcgcctccgccgcctggagcccgaggcgggcgagctgcggcgggagctggagcgcctg
gccgccgactgcgccgccctggaggcgctgctggagcgcctgcgggccgagcaccggcgc
ctgcgagaggagcagcggcagcagcagcagcagcaagtaaggcaccggcacccctcgagg
ctcctcgccctgccgccgccgcccgccccgagccagcgggagctggaggactccttcgcg
ctggtgctaagctggagctgcgagcagagcctggagcgctacgaggccgagctgcgggcg
ctgcaggagcttgaacagcgcctgggcgccgggaaggaggccgagcagctgcgccttcac
agcgagcggagccgccgccacctggaggagctctggcggcaggggcaggagctggccgcg
ctgggcgagcggctggagcaggagcggctggcgcaggtggagcgccacggcgcccagcgc
ggcgagtaccagatgataattgaagccctggaagaagaaaagcggttcctaactgtgtct
atcgcagagtacctaaaggactaccacgaactcctgcaggtgaaagcaggtctcagcctt
gaaattgcaacttacagaactctgttagaaggagaaagcagccaatggattcttttatgg
gaaaaagaacacggaagaaaagcgccccaaggtgtccgagatgtacttcatgagtatagc
aaccgctactcagcttatcgacaagagaaaggaaagagagcttttccagcaatccaaaat
gttgacacaagatataaaaccccgatcgcaaatatgagcagctctgcagtttattcatct
cgaacaaaacccagcagaattcagacagctgctcctgggaaaacattaaggaacgatgcc
ctctggttagaataccgtccttcaacagctattaaaaaggacacaactcatcagagaaca
gtgacagaccagagacaggtccgaacttttattccatcttctgttactagccgagaaagg
gaatttcggcagagaacattgccagaaagcaagaaagctgaagctgtaattacagcaaaa
gaatcaacagaagtccagaaaggtacaacaatcaccaatacttttgagaatgccaaacca
aaagtaatgggtgtttctacgacatcttacaatctgaattccagttctaaagaaactaaa
tatgagagaatccaagaaggaactgatgctcaagtgaatgaacaaatcagggaagtgaag
gtaatgaaagaggagaaaccatttttgttaccaggaagagatgaaaaggaaagatcagcc
aggaaagtgactgaacctgtcccagcaaagacggaaaagaaattggttggagctgaaaca
aaggttagctttgaaaagaagatggaagttaaacatgggacagaggaggaaaagtatacc
gtgaaagagccaaacctcaattatagtaaaaagaaagtcaaccttacagaagatgaatca
cccaaggatggaaaatatgtaaaatgggaagaacgcattagagttgatacatcaggaaaa
gatttgccatcggatataaagatggataaaagtagttcatttctgtgggaaaaaaatgtg
acaacacaaagccgagaagcagctgagatacccgtcctttctgatgtgcatagtcaagat
caactgtttaaaaataacaaaacagaaataacattacaagagtcaaaaccttctgtaggt
aaacaaaaagttgacgccacacctaagttgtccagaaatatcccagaaagagaattgaac
caagagagagtaagtaaagaaggaagccctacaatggataccttacttacagaaagcata
gcagaaaatattgtatctgacattcttaaaggttttgtgcagaaatctgattcgggtctt
ccccttgataccaaatttactttcttggaaaagaaagtttctgaggacggaaaagcaaag
tctgaggtcactgtgcagtctacagttcaggaagacctgagcatttcagacgaatttgat
ctgggacgtttcttaaagaaagatgttaagggagtgggagatactaaggaagttttatca
gacgctgtgttagaagacatcatcagtgctggattgaaaggacgggagggccaaggaaaa
agaactgttcaagttgagatagttgaggagccggtagaatgtgccgctgatgaaagaaca
gaatttccaacaccatttgaagtggaagaggcggaagatacattgcccggtatggcagga
catctttactacgggggtgaggagaaggctaccacaagcgctgctcaggatcttaaacga
caacaacccagtgtgattgtgtctcatgtagaagaagtttctgaaggggatgatgtcgtt
gatgaaggaaaatatttcgtatcaactccagaagaacaccccttgattcatgagaaagat
gacagctccgtatatggacaaatccacattgaagaggaatccacgattaagtattcgtgg
caagatgaatttcttcagggagctcagaaaagggtcaatgaaggcatgggttcaccagaa
cttatataccaggtgatggggggagaagaaagtgcctttgtttccaaggacgagccccca
gtggagcacatagcacatgctgaatccatcgttattgagagagaaattaaaataccacac
gaattccagacatcaataaagagtctgttttctgaggagtcgaaggaccctaaacatcag
ctgaaagaagcattggaaaagctggaagacaaccttccagaaagcgtcaaacaagagctc
tctgcactaaccaaagagggccaagcagaatcaagcagtttggaagtcgatattaaaaaa
gtggagcagaccaaaaaaggggggttggtcactatagttgccgaagtcagcctgtccgag
acactagaccttgaccagtttaactcaggatatcttggcgaaggccttgctgttgagaga
gagtcgccaacacagttctcggctacatatgatactgatgaacacatgaagccagagtca
gaaagctaccatgatggtacacgtaaacttgaaataatagaagttgcttccacaccgtgg
actacgcaagcggtttctagctcagctaaattaagcagcagtggcggagtgaaatctcct
accagtgaacgagttgtcagcgaaggcccggttttcaaaaatttgggacttgacagcaga
agcgacccgtctcacttgcaagggccattcgatattaacagatctgttcggcaaattata
gtcggcccgacagaaatccacagaacggaggaagtcctgcatgaaggtcctttttccaaa
actctggaatttggttcaggtgattttgaggcaggaggagcatcagcaggcgtcagccga
tctgtacaagaattcacacttggtcctgaagagactcaaacagaagaaataacgtataga
gggcctgttcgtaaaacagtgggaggtcctgaaaaccctagtcaggcacagttttcagct
gatagtaaatccactaagcttgtcatgttgggctcaaagcaaattattgaagaaacagtt
tttgaggggccggcttctgacttttcgctagatgataatagctgggtgccctctcaaacg
aaagggctggaggaaactggcagatcggtgagacacattcgaatagatccgaaagaggtc
cgtactcagcaagtagtttatgaaggtcctctttctgaagttgtagagcacagtagtgct
ggtgaccgtatttcagttaatgagtctgtgaggcacattaaggtgggacagaaagaaaca
caagccgtgtatgaagaatcttctactacggaaactgaacctagtcatgatctggactgg
cttctcaaggaagggatgctagatactaattccaccgtcagacatattaaggtcgctccc
aaagaatcaatgacatcggagcaaattattttcaaagggcccatttccaaacaacactta
gagtttagtgaatctggacaaatgttctcttctgaagggtcagcaaggcacattacatcg
gggcagaaggatatttggagcaatgaacgtgtttcatatcaaggttctgtttccgaatct
tctggtatcagctctgccggggaagatactttagaaacggaagggcctacagagatcagt
cggtcggtcagacatatcagactgggccctgtcgaaactcatgcagaacaaattgtattc
caaggccctattggaactgtggagctttcgccaacagatggaccaccagaaaacaaatct
cttgggcacatcaagataggacctaaagaaacatcctttacctttcagatggatgtaact
aatgtagcaggaggaggacaagaagctaaatttttgttatcaaatacaaaagatcagccg
gaggatgcagccaagggtagcgagagagaggcccaaactgaagaaagatcagagaagtca
gcattcaatcgcactgttcagctgcaaaggatggtagaccaaagatccgtggtttctgat
gaaaagaaaattgctcttctctacctgaatgagaatgaagaggaagaggaggaggatgga
ccttggttctga
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integrated database retrieval system