Eublepharis macularius (Leopard gecko): 129346029
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Entry
129346029 CDS
T09084
Symbol
CACNA1F
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04010
MAPK signaling pathway
emc04020
Calcium signaling pathway
emc04260
Cardiac muscle contraction
emc04261
Adrenergic signaling in cardiomyocytes
emc04270
Vascular smooth muscle contraction
emc04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129346029 (CACNA1F)
04020 Calcium signaling pathway
129346029 (CACNA1F)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
129346029 (CACNA1F)
09153 Circulatory system
04260 Cardiac muscle contraction
129346029 (CACNA1F)
04261 Adrenergic signaling in cardiomyocytes
129346029 (CACNA1F)
04270 Vascular smooth muscle contraction
129346029 (CACNA1F)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
emc04040
]
129346029 (CACNA1F)
Ion channels [BR:
emc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129346029 (CACNA1F)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
HemY_N
FAM176
Motif
Other DBs
NCBI-GeneID:
129346029
NCBI-ProteinID:
XP_054859253
UniProt:
A0AA97KLB6
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All DBs
Position
19:complement(24697112..24775863)
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AA seq
2020 aa
AA seq
DB search
MSECNGRPVGTPEALPRSAAEAFVEATGQALAWTLTNGGSDTLGSTGSGGQRKRLQHNKH
KTQGTNVVHRSPRALFCLRLNNPIRQAAINIVEWKPFDILILMTIFANCVALGVYIPFPE
DDSNVANHNLEQVEYIFLIIFTVETFLKILAYGLVMHPSAYIRNGWNLLDFVIVVVGLFS
VILEQFSHKPGDAHHMSGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKAMVPL
LHIALLVLFVIIIYAIIGLELFIGRMHKTCFIIGSELEAEEDPSPCAFSGHGRECTVNNS
ECRGKWEGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQDAMGHELPWLYFVSLVI
FGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEEDLKGYLDWITQAEDIEPD
EEGDEIDDKHTRMTVADLTGKKKGKKWFKHNNHSIDSHTSLPASETTSVNTENVGDEDHH
QNRCCEMCLGKLSKTKSGRRLRRMNRLFRKRCRLAVKSVTFYWMVLLLVFLNTLTIASEH
YNQPDWLTEIQAYANKVLLSLFTLEMLLKMYSLGLQAYFVSFFNRFDCFVVCGGILETVL
VEFEIMQPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIF
SLLGMQLFGGKFNFDETQTKRSTFDTFPQALLTVFQILTGEDWNAVMYDGIMAYGGPYFP
GMLVCVYFIILFICGNYILLNVFLAIAVDNLADADSINASKKKKGTPTEGEESSEKDEKS
VKVDCGEEEEEEGSAEEGEDEEDDEGDQESLAESRLDKLEDIPKEKVLPIPEGSSFFCLS
KTNPLRVWCHRLIHHHIFTNLILVFIILSSISLAAEDPIRAHSFRNNILGYFDYAFTAIF
TVEILLKMTAYGAFLHKGSFCRNWFNLLDLLVVSVSLISFGIHSSAISVVKILRVLRVLR
PLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYSCTDEAKH
TPEDCKGTFIVYKDGDVTHPMVRERIWLNSDFNFDNVPSGMMALFTVSTFEGWPSLLYKA
IDANEENKGPIYNYRVEISIFFIVYIIVIAFFMMNIFVGFVIITFRAQGEQEYKNCELDK
NQRQCVEYSLKAQPLRRYIPKNKYQYRVWYMVNSTGFEYIMFVLILLNTIALSVQHYEQS
TPFNYVMDLLNMVFTGLFTVEMVLKIIAFKPKHYFCDAWNTFDALIVVGSVVDIAVTEVN
NGGHVGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIA
MIFFIYAVIGMQTFGKVAMQDNTPINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPG
KRCDPESDYEPGEELTCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILG
PHHLDEFKRIWSEYDPAAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLVAMNMPL
NSDGTVTFNATLFALVRTSLKIKTEGELEVANKELRSVIKKIWKRTKPKLLNEVIPPPEE
EEVTVGKFYATFLIQDYFRKFRKRKERGLLGPDGPPSNSSALQAGLKSLQDLGPEIRRAM
SCDLEEEEEEETDEAMCEDETVTYKSSEALCGSTPPDHSTNASATATSPDQENKTLANGL
MGSGDPSSDSHSHMTNGPTHHEENIRDNEEPAELPNLPARRRMSRHSSNGSCNPTAKEEA
TPVEDYGEDTSAEQGYYSREEDSESLASHDRQPSLKNSQPRCHRWDNGYGGSLPLPSRHV
SNELTNGLPDSRQTKRRRLLPATPTGRKPTFNIQCLQRQGSCDDIPIPGTYHQNAPPCRA
RTQSWATPPKRSRLLYAPLILVEEDGLPGHDWEKNSSSLPPMSRAHWYMEDQELPYRTYG
HLRVPGPLKHGYSDKRGSADSLVEAVLISEGLGLYARDPKFVAFAKREIADACHMTIDEM
ESAATDLLIGSLGLVYSDEEPFRSREEEDLADEMACVTSY
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtgcaacggaagaccggttggcactcctgaggcactgccacgttcggcagcc
gaggcttttgtggaggcaacaggccaggccctggcatggacactcaccaacgggggctca
gatactctgggctcgacgggcagcggggggcagaggaagcgccttcagcacaacaagcac
aagacccagggcaccaatgtggtgcaccgttctccacgagccctcttctgcctcaggttg
aacaaccccatccgccaggctgccatcaacattgttgaatggaaaccatttgatatcctc
attctcatgaccatctttgctaactgcgtggccttaggggtctatatccctttcccagag
gacgactccaatgtcgccaaccacaacttggagcaagtggaatacatctttctcatcata
ttcacggtggagactttcctcaagatcctggcctacggtttggtcatgcatcccagcgcc
tatatccggaatggctggaaccttcttgactttgtcatcgttgtggtggggctcttcagt
gtgatcttggaacaattttcccacaagcctggggatgcgcatcatatgagtgggaagcct
ggtggatttgatgtcaaggctctgagagccttccgtgttctgcgacctctgcgcctcgta
tctggtgtccctagcctgcacattgtcttgaactccatcatgaaagccatggtgcccctc
ttgcacattgccctgttggttctttttgtcatcatcatctacgccatcatcggcttggag
ctgttcatcgggcgcatgcacaagacctgcttcatcattggctcagaactggaagctgag
gaggacccctccccttgtgccttttctggtcatggtcgggaatgcacagtgaacaacagc
gagtgccgtggcaagtgggaagggccaaatggtggcatcaccaactttgataacttcttc
tttgccatgctgactgtcttccagtgcatcaccatggaaggttggactgatgtgctctat
tggatgcaggacgcaatgggtcatgagctgccgtggctttactttgtcagccttgtcatc
tttggctccttcttcgtgctcaacctggttttgggtgtgctgagtggagaattctccaag
gagcgagagaaggcaaaagcccggggcgacttccaaaagctacgggagaagcagcaaatg
gaggaagatctgaaaggctacctggattggatcacgcaggccgaagacattgagcctgat
gaggaaggggatgagatagacgacaaacacacccgcatgactgtcgcagatttgacgggg
aagaagaaaggcaagaaatggttcaaacacaacaaccactccatcgacagtcacaccagt
ctgcctgccagcgaaaccacatctgtgaatacagagaatgtcggggatgaagaccatcat
cagaaccgctgctgtgaaatgtgcttaggcaagctctcaaagactaaatctggccgccga
ctgcgccgcatgaaccgcctcttccggaaaagatgccgcctggctgtcaaatctgtcact
ttctattggatggtcctgctcctcgtctttcttaacaccctcaccattgcctctgagcat
tacaaccagcccgactggctcacagagattcaagcttatgccaacaaagttcttctctca
ctgttcaccctggagatgcttctaaagatgtacagcctgggcctacaggcctactttgtc
agctttttcaaccgctttgactgctttgtggtgtgcggcggtatcctggagaccgtcttg
gtagagtttgaaatcatgcagcctcttggcatctccgtgcttcgctgtgtccgcctcttg
cggatcttcaaggttaccaggcactgggcctcgctaagcaaccttgtggcctccttgctg
aactccatgaagtccatcgcttctctgcttcttctgctcttcctcttcatcattatcttc
tccttgctgggcatgcagctctttgggggcaagttcaactttgacgagacccagaccaag
cgcagcacctttgatactttcccccaggccttgctgactgtcttccagatcctgacggga
gaggattggaatgcggtgatgtatgatggcatcatggcctacggtggcccctattttcca
ggcatgctggtctgcgtgtatttcatcatcctcttcatttgtggaaactatatcctcctc
aatgtcttcttggccattgctgtggacaatcttgcagatgcagacagtataaatgcctca
aaaaagaagaaagggaccccaacagaaggggaggaaagcagtgaaaaagacgagaaaagt
gtgaaggtggattgcggcgaggaagaagaggaggaaggcagtgcagaagaaggtgaagac
gaggaggacgatgaaggagatcaggagagcttggcagaatctcgcctggacaaactggag
gatattcccaaggagaaagtactgccaattcctgaaggaagctcttttttctgtctcagc
aagacgaacccgcttcgggtttggtgccacaggctgattcatcaccacatcttcaccaac
ctcatcctcgtcttcatcattctcagtagcatctccctggcagctgaggaccctatccgg
gcacactctttccgcaataatattctgggctacttcgactatgccttcactgctatcttc
actgttgagatcctgctcaagatgacagcttacggcgccttcctgcacaagggctcgttt
tgccggaactggttcaatcttctggatctgcttgtggtcagtgtgtcgctcatctctttc
ggcatccactccagtgccatctctgtggtgaagatcttgcgagtgctacgcgtgctccgt
ccactccgagccatcaaccgggcgaaggggctcaagcatgtggtgcagtgtgtgtttgta
gccatccgcaccattggcaacatcatgatagtcaccaccctcttgcagttcatgtttgct
tgcatcggagttcagctgttcaagggcaaattctacagctgcacagatgaggccaagcat
actccggaggattgcaagggcacattcattgtgtacaaggatggagatgtgactcaccca
atggtgcgagagcgcatctggctcaacagtgacttcaacttcgacaatgtgccctcgggc
atgatggcgctcttcactgtctccacttttgagggctggccatcgctgctgtacaaggcc
attgatgccaatgaggaaaacaagggccccatctacaactaccgggtcgagatctccatc
ttcttcatcgtctacatcatcgtgattgccttcttcatgatgaatatctttgtgggcttc
gttatcatcacattccgagcacagggagaacaggaatacaagaactgtgagctcgataag
aaccagcggcagtgtgtggaatattccttgaaggcccagccgttacggcgctacatcccc
aagaacaaataccagtacagagtctggtacatggtcaactccactggctttgagtacatc
atgtttgtgctcatcctgctcaacaccattgctctgtctgtacagcactacgaacagtcc
acaccctttaactacgtcatggacctgctcaacatggtcttcacaggcctcttcactgtt
gagatggtgctgaagatcattgccttcaagcctaagcactacttctgtgatgcatggaac
acttttgatgctctgattgtggtggggagtgtcgtggacatcgctgtcactgaagtcaac
aatggaggacatgttggagagagctcagaagacagctctcgcatctccattaccttcttc
cgcctcttccgcgtcatgcgcctggtcaagttgctcagcaaaggggagggcatccgcact
ctgctctggaccttcatcaaatccttccaggcattgccatatgttgcgcttctcattgcc
atgatcttcttcatctacgcagtcatcggcatgcagacctttgggaaagtggcaatgcag
gataacacaccgatcaaccgcaacaataacttccagacctttccgcaagctgtgctgttg
ttgttcaggtgtgccacaggggaagcctggcaggagatcatgctggccagcttgcctggc
aaacgttgtgatccagagtccgactacgagccaggagaggagctcacctgcggcagcaac
tttgccattgtttatttcatcagctttttcatgctctgtgccttcctgatcattaacctc
tttgtggctgtcatcatggacaattttgactatctgactcgagactggtccattctgggt
ccccaccatctcgatgagttcaagcggatctggtcagaatatgacccagctgccaagggt
cgcatcaagcaccttgatgtggtggccctactacgccggatacaaccacccttgggcttt
ggaaaactctgtccccaccgtgtagcctgcaagagactggtggcgatgaacatgcccctg
aactcagatggaaccgtcaccttcaacgctaccctctttgctctggtgcggacgtccctc
aaaatcaagacagaaggagaacttgaggtggcaaataaggagctccgctctgtcatcaaa
aagatctggaagcggaccaaacccaagctactgaatgaggtgatacccccaccggaagag
gaggaggtcaccgtggggaagttctatgccacattcctgatccaggactatttccggaaa
ttccgtaagcggaaggagagggggctgctggggccagacgggcctccaagcaactcttct
gctctgcaggctggattgaaaagtttgcaagacttggggcccgaaatccgccgggcgatg
tcctgtgacctggaagaggaagaagaggaggaaacagatgaggcaatgtgtgaggatgag
acggtgacctacaagagctctgaagcgttgtgtggcagcactcctcctgaccacagcacc
aatgcctcagctactgcaacatcaccagaccaggagaacaagacgttggcaaacggcctc
atgggctctggtgacccctcaagtgacagccattcacatatgaccaatgggccaacccat
catgaagaaaacatcagggacaacgaggaacctgctgaactgcctaatctccccgcccgc
cgcaggatgagcagacatagttccaatggtagctgcaacccaacggcgaaagaagaagcc
acacctgtggaggattatggagaagacacttcagctgagcaaggctattacagtcgagag
gaagactctgagagcttggcctcccatgacagacagcccagcctgaaaaactctcagccc
cgctgccatcgctgggacaatggctacggcggatcattgcccctcccctcccggcacgtc
agcaacgagctcaccaatggactgccagacagcaggcaaaccaagcgcaggcgcctcttg
cctgccacacccacaggccgcaaaccaaccttcaacatccagtgcctgcagcgtcaaggc
agctgtgatgatatccctatcccaggcacctatcaccagaatgcacccccctgccgagca
cgaacacagtcatgggcaacgccacccaaacggagccgcttgctgtatgcccccctgata
ctggtggaggaggacggcctgccaggccatgactgggagaagaacagcagcagcctccca
cccatgtcgcgagctcactggtacatggaggaccaggagctgccctaccgcacatatggc
catctccgtgtgcccggtccactcaagcacggctacagcgacaagcgtgggagtgcagat
agcctggtggaggcggtgctcatctctgagggcttgggcctctacgcccgggacccaaag
tttgtggcctttgccaagcgggagattgccgatgcttgccacatgaccattgacgagatg
gagagtgctgccacggaccttctgatcgggagcctgggccttgtttacagtgacgaggag
cccttccgttcccgtgaagaagaggacttagctgatgagatggcctgtgtcacctcttat
tga
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