Escherichia coli O7 K1 CE10: CE10_3079
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Entry
CE10_3079 CDS
T01999
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I, NADP-dependent
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
eoc
Escherichia coli O7:K1 CE10
Pathway
eoc00250
Alanine, aspartate and glutamate metabolism
eoc00310
Lysine degradation
eoc00350
Tyrosine metabolism
eoc00650
Butanoate metabolism
eoc00760
Nicotinate and nicotinamide metabolism
eoc01100
Metabolic pathways
eoc01120
Microbial metabolism in diverse environments
Module
eoc_M00027
GABA (gamma-Aminobutyrate) shunt
eoc_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
eoc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CE10_3079 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CE10_3079 (gabD)
00310 Lysine degradation
CE10_3079 (gabD)
00350 Tyrosine metabolism
CE10_3079 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CE10_3079 (gabD)
Enzymes [BR:
eoc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CE10_3079 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CE10_3079 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CE10_3079 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AEQ13821
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All DBs
Position
3143230..3144678
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AA seq
482 aa
AA seq
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MKLNDSNLFRQQALINGEWLDANNGEVIEVTNPANGDKLGSVPKMGADETRAAIDAANRA
LPAWRALTAKERANILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
HERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaacgacagtaacttattccgccagcaggcgttaattaacggggagtggctg
gacgccaacaatggcgaagtcatcgaggtcactaatccggcaaacggcgacaagctgggt
agcgtacccaaaatgggcgcagatgaaacccgcgccgctatcgacgccgccaaccgcgcc
ctgcccgcctggcgtgcgctcaccgccaaagaacgcgccaacattctgcgcaactggttc
aatttgatgatggagcatcaggacgatttagcgcgcctgatgaccctcgaacagggcaaa
ccgctggcggaagcgaaaggcgaaatcagctacgcagcctcttttattgagtggtttgcc
gaagaaggcaaacgtatttatggcgataccattcccggtcatcaggccgacaaacgcctg
attgttatcaaacagccgattggcgttaccgccgccatcacgccgtggaacttcccggcg
gcgatgattacccgtaaagccggtccggcgctggcggcaggctgcacgatggtgctgaaa
cctgccagtcagacgccgttctctgcgctggcgctggcggaactggcgattcgcgcaggc
gttccggctggcgtatttaacgtggtcaccggttcggcgggcgcggtcggtaacgaactg
accagcaatccgctggtgcgcaagctgtcgtttaccggctcgaccgaaattggccgccag
ttaatggaacagtgcgcgaaagacatcaagaaagtgtcgctggagctgggcggcaacgcg
ccgtttatcgtctttgacgatgccgacctcgacaaagccgtggaaggcgcactggcctcg
aaattccgcaacgccgggcaaacctgcgtctgcgccaaccgtttatacgtgcaggacggc
gtgtatgaccgctttgccgaaaaattgcagcaggcggtgagcaaactgcacatcggcgac
gggctggataacggcgtcaccatcgggccgctgatcgatgaaaaagcggtagcaaaagtg
gaagagcatattgccgatgccctggagaaaggcgcgcgcgtggtttgcggtggtaaagca
cacgaacgcggcggcaacttcttccagccgaccattctggtggacgttccggccaacgcc
aaagtgtcgaaagaagagacgttcggccccctcgccccgctgttccgctttaaagatgaa
gccgatgtgattgcgcaagccaatgacaccgagtttggtcttgccgcctatttctacgcc
cgtgatttaagccgcgtcttccgcgtgggcgaagcgctggagtacggcatcgtcggcatc
aataccgggataatttccaatgaagtggccccgttcggcggcattaaagcctcgggtctg
ggtcgtgaaggttcgaagtatggcatcgaagattacttagaaatcaaatatatgtgcatc
ggtctttaa
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