Escherichia coli O103 H2 12009 (EHEC): ECO103_3202
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Entry
ECO103_3202 CDS
T01096
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I, NADP-dependent
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Pathway
eoh00250
Alanine, aspartate and glutamate metabolism
eoh00310
Lysine degradation
eoh00350
Tyrosine metabolism
eoh00650
Butanoate metabolism
eoh00760
Nicotinate and nicotinamide metabolism
eoh01100
Metabolic pathways
eoh01120
Microbial metabolism in diverse environments
Module
eoh_M00027
GABA (gamma-Aminobutyrate) shunt
eoh_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
ECO103_3202 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
ECO103_3202 (gabD)
00310 Lysine degradation
ECO103_3202 (gabD)
00350 Tyrosine metabolism
ECO103_3202 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
ECO103_3202 (gabD)
Enzymes [BR:
eoh01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
ECO103_3202 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
ECO103_3202 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
ECO103_3202 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
BAI31953
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Position
3253798..3255246
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AA seq
482 aa
AA seq
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MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRA
LPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDRFAEKLQQAVSKLHIGDGLDKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
DERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaacgacagtaacttattccgccagcaggcgttgattaacggggaatggctg
gacgccaacaatggcgaggtcatcgacgtcaccaatccggcgaacggcgacaagctgggt
agcgtgccgaaaatgggcgcggatgaaacccgcgccgctatcgacgccgccaaccgcgcc
ctgccagcctggcgcgcgctcaccgccaaagaacgcgccaccattctgcgcaactggttc
aatttgatgatggagcatcaggacgatttagcgcgcctgatgaccctcgaacagggtaaa
ccgctggctgaagcgaaaggcgaaatcagctacgccgcttcctttattgagtggtttgcc
gaagaaggcaaacgcatttatggcgacaccattcccggtcatcaggccgataagcgcctg
attgttatcaagcagccgattggcgttaccgccgccatcacgccgtggaacttcccggcg
gcgatgattacccgtaaagccggtccggcgctggcggcaggctgcacgatggtgctgaaa
cccgccagtcagacgccgttctctgcgctggcgctggcggagctggcgattcgcgcgggc
attccggctggcgtatttaacgtggtcaccggttcggcgggcgcggtgggtaacgaactg
accagcaacccgctggtgcgcaaactgtcgtttaccggttcgaccgaaattggccgccag
ttaatggaacagtgcgcgaaagacatcaagaaagtgtcgctggagctgggcggcaacgcg
ccgtttatcgtctttgatgatgccgatctcgacaaagccgtggaaggcgcactggcctcg
aaattccgcaacgccgggcaaacctgcgtctgcgccaaccgtttatacgtgcaggacggc
gtgtatgaccgctttgccgaaaaattacagcaggcggtgagcaaactgcacatcggcgac
gggctggataaaggcgtcaccatcgggccgctgatcgatgaaaaagcggtagcaaaagtg
gaagagcatattgccgatgcgctggagaaaggtgcgcgtgtggtttgcggcggtaaagcg
gatgaacgcggcggcaacttcttccagccgaccattctggtggacgttccagccaacgcc
aaagtgtcgaaagaagagacgttcggccccctcgccccactgttccgttttaaagatgaa
gccgatgtgattgcgcaagccaatgacaccgagtttggccttgccgcctatttctacgcc
cgtgatttaagccgcgtcttccgcgtgggcgaagcgctggagtacggcatcgtcggcatc
aataccggcatcatttccaatgaagtggccccgttcggcggcattaaagcctcgggtctg
ggtcgtgaaggttcgaagtatggcatcgaagattacttagaaatcaaatatatgtgcatc
ggtctttaa
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