Erwinia pyrifoliae DSM 12163: EPYR_03484
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Entry
EPYR_03484 CDS
T02121
Symbol
rhs
Name
(GenBank) Nematicidal protein
Organism
epr
Erwinia pyrifoliae DSM 12163
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
CAY75864
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All DBs
Position
complement(3519063..3524027)
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AA seq
1654 aa
AA seq
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MKSPSFYSHAGNFISATLGGVDPRTGLFNLSLPLVNLHSAKLAGPALSLSLQYSPLSSDN
EGFGRGFALNLTRYNLAARKLTLSSGEEYRVSSSGTTVKQKKLKNFIFENTGNSTCRVIH
KSGLIENLAQYGSLFLPTLITAPDGRSLNFVWSSSHSPSRLVRVTEDDGTVLCAISHADE
SVATVALDVLPDSVESAYRMVFKFTNAHLVRVTSTADAVPPTWNFLYEDVGPGNDYRVIT
SLTSPTGLTEKVAYFADRGMAFPDIAGLAALPCVHMHKISPGGGQPLIVTQWEWTENNYL
GRDSGQNQWQPDTDQMLDILLNDYQYGSTAKVLDMDGSTILSALTRRYNSYHLQVMESTL
RSGKTFLFCTQYHARPGATFAEQPAQYALPVLQTKSWDDGSDAPPRTRVTRWQFDEAGNP
LRQDGPDGTVTEYVYYPAEGEGEACPADPNAFTRYLKSKTLIPRQVKGDEPVTLWVNTWK
KQGVLNGKGFAVVPDTVTQTIGSVRIFITREYYGDVTDRLTFGREKARTTILMPDVQASD
SCTRRQSFGYKASPLGLTQSEAFIAHDGLSTNRSILRHVSLGYVLSETDAQGVTVSWTYD
KVGRVLTRSVMPGMRHERKTTWSYAIEDKGPVTLETDAAGNQMKTFYDGAGRESRCQRLD
WDGGQKWFEVSSRTWGALGEVAAGFCSDWLTDSSEQYRLGTFVSHDGWGCISEQDFSDGT
KSVQTTDPVRLTQTVSVHGSAGGESLNSGTFTTLLDEQSRLPLTITCKNTHGETQGERRH
EWDGLGRLRLDTDERNNKTARSYDAFGRVLVQILPDGSKVNRTYAPHLTGNQVAGISVTG
QDLQGNPHTWLLGTQKFDGLGRITERSSGGRTTAYFYEGAAPVPASITLPSGKILKYTYI
PELGNAVSSMTVDGASQTFSYYPATGRLKTAEGGLTRIHHTLNPSGSMKAETFTHGGSTR
DTAYTRTLAGKMVTYTDIAASKTTCERDASGRITAIKDAALTVELQYDALGRLNSQRVKD
IVTQATLLTRMTFDDFGRETVRSIVDSNGVTLEVVQTWLQNGLLAGRTTQQDRTVIRQER
YEYDVRNRLTSYTVSGTSLPQDAYGHQITAQAYRYDALNNLTTVTTPLIYGSIDVATYHY
GNSADPTQLTAVLHTQVGYPPVIRLEYDAEGRMTRDEAGRSLSYDAIGRLTGIGGESRYE
YDALNRLVGQNVSDTDSRQLYYRGAERVNEVLVQQEQVTRLVKNGHTCLGMSDGSNLTLM
ASDRHDSLIWSCDGSQKEGKPHFWLPYGKGDHVGLLPGFNGERSDPISGSYPLGNGYRAY
NPVLMRFNCPDSLSPFGAGGINPYAYCAGDPINHTDPSGHMSWQGVLGIVTGTLGLSFSV
FTAGASIAAASGCIAAFGAASTTSLVVGGLGMIADATAIAGGATENSNPRASTVLGWVSM
ATGMAGVVTGLAQMVKALTGAKTSVHLSRLEEMGIGSPKVIGTHDFGGYHPHPDVLSTPV
HSTYTAIDWDSGLPRLNIVAHGTPGFLLVDRDVWVNADALYHLLFEHGVINYNYYEIRML
VCHSAEPSFAGISVAERFAQITGRPVEGFHGVMTMHETLNMTGVPIAAAYMVNDAYRHGG
ALAATELMHRYRAYITIGPHPSPSTPNISQTFYP
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaccctctttttattctcatgcgggtaactttattagcgctactttggggggc
gtcgatccgcgcaccgggctttttaatcttagtctaccgttggttaatctccactctgcc
aagctggctggcccggcgctgtcgttgtccctgcaatattctccgctgtcatccgacaat
gaggggtttggcagggggttcgccctgaatctgactcgctataatctggccgcgcgaaag
ttgacgctatcctcaggcgaggaatatcgtgtcagcagtagcgggactaccgtaaaacag
aaaaaactcaaaaattttatcttcgaaaatacggggaactccacctgccgggtgattcac
aaatccgggcttatcgagaacctggcgcaatacggttcgctgttcctcccgacccttatc
accgcccccgatggacgaagccttaattttgtgtggagctcatcgcattcgccatcccgt
ctggtgcgggtgacagaggatgacggaacggtgttgtgcgcgatatctcatgccgatgag
tcggtcgccaccgtggcgttagacgtgctgccggatagtgtggaatcggcgtacaggatg
gtttttaaattcaccaatgcgcatctggtccgcgtgaccagcactgccgacgctgtcccg
ccgacctggaattttctttatgaagatgtgggtcccggaaatgactaccgggtgattacc
agcttaacatcgccaacgggtctgacggagaaggtagcctactttgctgacaggggaatg
gcgttccccgatattgcaggcctggcggcactaccgtgcgtgcatatgcacaaaatttcc
cccggaggcgggcagccattgatcgtcacacagtgggagtggacggagaataattatctc
ggcagggattcaggccagaatcagtggcagcctgacactgaccagatgctggatatcctg
ctcaacgattaccagtacggctccacggcaaaagtgctggatatggatggcagcaccata
ttgagtgcgctgacccgacgctacaacagctatcatttgcaggtaatggaaagcacgctc
aggtcagggaaaacgttcctgttttgcacgcaataccatgccaggcctggcgcgaccttt
gctgaacagccggcccaatatgccttgccagttctgcaaactaaatcctgggatgatggc
agtgatgccccgccgcgtacgcgcgttacccgctggcagtttgatgaggcgggtaaccct
ctgcggcaggatggcccggacggcaccgtcacagaatatgtttattatccggctgaaggt
gaaggtgaagcctgtccagccgatccgaacgcttttacccgctatctgaaaagtaaaacg
ctcatcccccgccaggtgaagggcgatgagccagttaccctgtgggtcaatacctggaaa
aagcagggggtgctaaacggcaaaggctttgccgtcgtgccggatacggtaacgcaaacc
atcggcagcgtccgaatttttatcacccgcgagtactatggcgatgtgaccgacaggctg
acgttcggccgtgaaaaagcacgcaccactattctgatgccggacgtgcaggccagcgat
tcctgcactcgcaggcagtccttcggttataaagcctccccgctggggctaacacagtct
gaggcctttattgcccacgatggcctgtcgaccaaccgctcgattttgcggcatgtcagt
ctggggtatgttctgtctgaaacggatgcgcagggcgtgacggtgagctggacgtatgac
aaggtcggccgcgtattaacccgaagcgtgatgccaggaatgcgacatgagcgtaaaaca
acctggtcgtatgccattgaggataaaggcccggtcaccctcgaaaccgatgcggcaggc
aaccagatgaaaaccttttatgatggggccggccgggaatcacgctgccaacgtcttgat
tgggatggggggcagaagtggtttgaggtttcctcgcgcacctggggggcgttgggtgaa
gtggctgccggcttctgcagcgactggttgactgattcatcagagcagtatcggctgggt
actttcgtctcgcatgatggctggggctgcatcagcgaacaagatttcagtgacggtacg
aagagtgtgcagaccaccgacccggtgcgactgactcaaaccgtttcggtgcacggcagc
gcgggcggtgaaagccttaactccggcacgtttaccacgctgctggacgagcagagccgc
ttgccgctgacgataacctgtaagaacacccacggtgagacgcagggtgaacgccgccat
gagtgggacggtcttggccgcttgcggctggacacggatgaacggaataataaaacggca
aggagttacgacgcattcgggcgcgtgctggtgcagatcctgccagacggtagcaaggtg
aatagaacgtatgcccctcatctgaccggtaatcaggtggctggcattagcgtcaccggg
caggatctgcagggcaacccgcatacctggctgcttgggacgcagaaatttgatggtctg
ggccggattactgagcgctccagcggcggcagaaccaccgcgtacttttacgagggggcc
gcgccagtccctgcttcgattacgttgccatcggggaaaatactgaagtatacctatatc
cccgagctgggtaacgcggtcagcagcatgacggtggacggcgcatcgcagacgttcagc
tattaccccgcaacgggccgcctgaagacggcagagggaggccttaccaggattcatcat
acccttaacccatccggtagtatgaaggcggaaaccttcactcatggcgggagcacgcgt
gatacagcctatacccgtacgctggccgggaaaatggtcacgtacacggatattgctgcc
agcaaaacaacctgtgagcgggatgcgtccgggcggataacagcgataaaagatgcggcc
ctgacggtcgaactgcagtacgacgcactggggcggctgaacagtcagcgggttaaggac
atcgttacgcaggccaccttgctcacccggatgacatttgacgattttggccgggaaacc
gtccgctcgattgttgacagcaacggcgtcacattggaggtggtgcaaacctggttgcag
aacggcctgctggccggtcggactacgcagcaggatcggaccgtgatacgacaggagcgg
tacgagtacgatgtccgcaaccgtctgacgagctacacggtgagcggtaccagcctgccg
caggatgcttatggccatcagataaccgcgcaggcgtacagatatgatgcgctgaacaac
ctgacgacggtgaccaccccactgatatacggcagtattgatgtggcgacctaccattac
ggaaacagcgccgatcctacgcagctgactgccgtgttacacacccaggttggctaccca
ccggtcatccggcttgagtatgacgcagaagggcggatgacgcgggacgaggcagggcgc
tcgttgtcctatgacgccatcggcagactgaccggcatcggcggtgaaagccgctacgaa
tacgacgcgctgaaccgcctggtcggtcagaacgtcagcgatacggacagccgtcagctt
tactaccgtggtgcagaacgggtgaatgaggtgttggtacagcaggagcaggtcacccgt
ctggttaagaacgggcacacctgcctcgggatgagcgatggcagcaacctgacgctgatg
gccagcgatcgccacgacagtctgatttggtcatgtgacggtagccagaaagaagggaag
ccgcatttctggttaccgtacggtaaaggagatcacgttgggctgctgccgggcttcaac
ggcgaacgctctgacccaatcagcggcagctaccctctgggcaacggctatcgtgcttac
aaccccgtactgatgcgttttaactgcccggatagcctgagtccgtttggtgccgggggc
attaatccttacgcgtattgtgccggtgacccgatcaaccacacggatccgtcggggcac
atgagctggcaaggagtattaggcatcgtgacggggacgctggggctgtcattctctgta
tttacggcgggagcatcgatagcggccgccagcgggtgtatagcggcatttggcgcggca
tcgaccacatcgctggtcgtgggggggttgggcatgatagcagatgcgacggccattgct
gggggcgcaacggaaaatagcaatccacgggcttcaaccgtgctgggctgggtgtctatg
gcgacgggaatggccggggtggtgaccgggctggcgcagatggttaaagcccttaccgga
gcaaaaacaagcgtgcatttgtcaaggctcgaagagatgggtataggatcgccaaaggtg
attggaactcatgatttcggcggttaccacccgcatccggatgtcctgtcaacacccgtt
cattccacttacactgccattgactgggatagcggcttgccccgattaaacattgtggcg
cacggtactccggggtttttactcgttgatcgtgatgtatgggtaaatgccgatgcgctc
tatcacctgctgtttgagcatggcgttatcaactataactattatgaaatcagaatgctg
gtttgtcacagtgctgaaccatcttttgcgggaatcagcgtggcagagcgttttgcacag
ataacaggcaggccggttgaaggttttcatggcgttatgacgatgcatgagacgctgaat
atgaccggtgtccctatagcagcagcgtacatggtcaatgatgcttaccggcatggaggg
gcgttggccgccactgagcttatgcacaggtatcgagcctatatcaccatcgggccgcat
cccagtccgtcaacacccaatatttctcaaacattctatccatga
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