Equus przewalskii (Przewalski's horse): 103540322
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Entry
103540322 CDS
T04644
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103540322 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epz03400
]
103540322 (LIG4)
Enzymes [BR:
epz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103540322 (LIG4)
DNA repair and recombination proteins [BR:
epz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103540322 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
ATG17_like
SSPI
Motif
Other DBs
NCBI-GeneID:
103540322
NCBI-ProteinID:
XP_008505095
LinkDB
All DBs
Position
Un
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFKEFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTRG
DTGDFATIAYFVLKPRSLPKGSLTIQQVNDILDSVASNNSAKRKDLIKKSLLQLITQSSA
LEQKWLIRMIVKDLKLGVSEQTVFSAFHNDAAELHNVTTDLEKVCRQLHDPLIGLSDISI
TLFSAFKPMLAAIANIERIEKDMKHQSFYIETKLDGERMQMHKHGDVYQYFSRNGYDYTD
QFGDSPQEGSLTPFIHNAFQPDIQICILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGRETLRKRCEILSSIFMPIPGRIEIVQKMQAHTKQEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLTDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPAGEKPSVFHTLCRVGSGYTMKELYDLGLKLAQHWKPFHKKAPPSSILC
GIEKPEVYIEPCNSVIVQIKATEIVSSDMYKTGCTLRFPRIEKIREDKEWHECLTLDDLE
QLRGKASGKLASRHLYVGGDEEPQEKKRKSAPKIRKVIGIIEHLKAPNLSNINKVSNMFE
DVEFCVMSGIDNHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDV
VKPEWLLECFKTKSCVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVDTDVNHLKEVFSG
IKNCSEQTPNEMASVIADLEYRYSWDHSPLSMFRHHTIYLDLYTVIRDLSTKIEGTRLAV
TALELRFHGAKVVSRLAEGVSHVIIGEDYSRVAAFKAFRRTLKRKFKILQEGWVTDSIDK
CELQEENQYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacttcgcaaactgttgcatcccacgttccttttgcagatttgtgt
tcaactttagaacgaatacagaaaagtaaaggacgtgcagaaaaaatcagacactttaaa
gaatttttagattcctggagaaaatttcatgatgctcttcataagaaccaaaaagatgtc
acagactctttttatccagcaatgagactgattcttcctcagctagaaagagagagaatg
gcctatggaatcaaagaaacgatgcttgctaagctttatattgaattgcttaatttacct
agagatggaaaagatgcccttaaacttttaaattacagaacacctactggaactcgtgga
gatactggagactttgcaacgattgcatactttgtgttgaaaccaagatctttaccgaaa
ggaagtttaaccatacagcaagtaaacgacattttagactcagttgccagcaataattct
gccaaaagaaaggacctaataaagaagagtcttcttcagcttatcactcagagttcagca
cttgaacaaaagtggctcatacggatgattgtaaaggacctaaagcttggtgttagtgag
caaactgtattttctgcttttcacaatgatgctgctgagttgcataatgtcaccacagat
ctggagaaagtttgtaggcaactgcatgatcctttgataggactcagtgatatttctatc
actttattctcggcttttaaaccaatgctagctgctatcgcaaatattgagcgaattgag
aaggacatgaaacaccagagtttctacattgaaaccaagctagatggcgagcgtatgcaa
atgcacaagcatggggatgtataccagtacttctcccgaaatggctatgactatacggat
cagtttggtgattctccacaggaaggttctcttacaccattcattcataatgcattccaa
ccagatatacaaatctgtattcttgatggtgagatgatggcctacaaccctaatacacaa
acttttatgcaaaaggggaataagtttgatattaaaagaatggtagaagattctgatctg
cagacttgttattgtgtctttgatgtgttgatggttaataataaaaagctaggacgtgag
accctaagaaagaggtgtgaaattcttagtagtatttttatgccgataccaggtagaata
gaaatagtacaaaaaatgcaagctcatacaaagcaagaagtaattgatgctttgaatgaa
gcaatagataaaagagaagagggaatcatgataaaacatcctctatccatttataagcca
gacaaaagaggtgaaggatggttgaaaattaaaccagagtatgtaaatggactgacagat
gaactggacatcctaattgtcggaggctattggggtaaaggctctcggggtggaatgatg
tctcattttttgtgtgctgtagcagagaaaccccctgctggtgaaaaaccatcagtgttt
cataccctgtgtcgtgttggctcaggttacaccatgaaagaactgtatgatctgggtttg
aaattggcccaacattggaagccttttcataaaaaagctccaccaagtagcattttatgt
gggatagagaagcctgaagtgtacattgagccttgtaattctgtcattgttcagattaag
gcaacagagattgtttccagtgatatgtataaaaccggctgcacgttgcgttttccacga
attgagaagataagagaagacaaagagtggcatgaatgcctgactctggatgacttggaa
cagcttcgagggaaggcatctggaaagctggcgtccagacacctttatgtaggtggtgat
gaagaaccacaagaaaagaagcggaaatctgccccaaagattaggaaagttattggaatt
atcgagcacttaaaagcacctaacctttctaacataaacaaagtttctaatatgtttgaa
gatgtggagttttgtgttatgagtggaatagacaaccatccaaagcctgatctggagaat
agaattgcagaatttggtggttatatagtacaaaatcctggccctgacacatactgtgtg
atcgcaggatctgagaacatcagagtgaaaaacatcatttcttcaaataagcatgatgtt
gtcaagcctgagtggctgttagagtgttttaagaccaaaagctgtgtgccatggcagcct
cgctttatgattcatatgtgcccatcaacaaaagaacattttgcccgtgaatatgattgc
tatggtgatagttactttgttgatacagacgtgaaccacctgaaggaagtgttctcggga
atcaaaaattgtagtgaacagactcctaacgagatggcttctgtgattgctgatttagaa
tatcgatattcctgggaccactctcctctcagtatgtttcgacaccacaccatttatttg
gacttgtatactgttattagagacttgagtaccaaaatcgaaggaacaagattagctgtt
acagccttggagcttcgatttcatggagcaaaagtagtttctcgtttagctgagggtgtg
tctcatgtaatcattggggaggattatagtcgtgttgcagcttttaaagcttttcgaagg
actcttaagagaaagtttaaaatcctgcaagaaggttgggtaactgattcaatagacaag
tgtgagttacaggaggaaaatcaatatttggtttaa
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