Equus przewalskii (Przewalski's horse): 103557876
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Entry
103557876 CDS
T04644
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specific factor 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03015
mRNA surveillance pathway
epz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103557876 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103557876 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epz03019
]
103557876 (CPSF6)
Messenger RNA biogenesis [BR:
epz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
103557876 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
103557876
NCBI-ProteinID:
XP_008528867
LinkDB
All DBs
Position
Un
AA seq
537 aa
AA seq
DB search
MDTLPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEI
KFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSR
KTTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPG
NLIKHLVKGTRPLFLETRIPWHMGHSIEEIPIFGLKAGQTPPRPPLGPPGPPGPPGPPPP
GQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQG
PPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDS
RGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSD
ASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERS
RERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggatactctcccaccaaccgttggtgacgacgtgggtaaaggagcagcaccgaacgtt
gtgtatacgtacaccgggaagagaattgctttgtacattgggaacctaacgtggtggaca
acagatgaagatttaactgaagcagttcattctctgggagtaaatgatattttggagata
aaattttttgaaaatcgggcaaatggccagtcaaaggggtttgcccttgttggtgttgga
tctgaagcatcctcaaaaaagttaatggatctgttgcctaaaagagaacttcatggtcag
aatcctgttgtaactccatgcaataaacagttcctgagtcaatttgaaatgcagtccagg
aaaactacacaatcaggacaaatgtctggggaaggtaaagctggtcctccaggaggcagt
tcacgcgcagcatttccacaaggtggtagaggacggggccgttttccaggggctgttccc
ggtggggacagatttcctgggccagcaggaccaggagggccacccccaccttttccagga
aatttgatcaagcatcttgttaaaggaactcggcctttgttcctggaaactaggattcca
tggcatatggggcacagcatagaggaaatacccatttttggcctaaaagctggacagact
ccaccgcgtccacccttaggtcctccaggcccacctggtccaccaggtcctccacctcct
ggtcaggttctgccgcctcctttagctgggcctcctaatcgaggagatcgccctccacca
ccagttctttttcctggacaaccttttgggcagcctccattgggtccgcttcctcctggt
cctccacctccagttccaggctacggcccccctcctggtccaccacctccacaacaggga
ccacctccacctccaggcccctttccacctcgcccacctggccctcttgggccacccctt
acacttgctcctcctccgcatcttcctggaccacctccaggtgctccaccgccagctcca
catgtgaacccggctttctttcctccaccaaccaacagcggcatgcctacatcagatagc
cggggtccaccaccgacagatccctatggccggcctccgccatatgataggggtgactat
ggacctcctggaagggaaatggatactgcaagaacaccattgagtgaagctgagtttgaa
gaaatcatgaatagaaatagggcaatctcaagcagtgctatttcaagagctgtgtctgat
gccagtgctggtgattatgggagtgctattgagacactggtaactgcgatttctttaatt
aaacagtctaaagtatctgccgatgatcgttgcaaagtccttattagctctttgcaagat
tgccttcatggaattgaatccaagtcttacggttctggatcaagaagacgtgaacgatca
agagagagggaccatagtagatcacgagaaaagagtcgacgtcataagtcccgtagtaga
gatcgtcatgatgattattatagagagagaagcagagaacgagagagacaccgggaccgt
gatcgtgaccgagaccgagagcgtgaccgcgagcgcgagtatcgtcatcgctag
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