Enterococcus raffinosus: J9537_05025
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Entry
J9537_05025 CDS
T07517
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
eraf
Enterococcus raffinosus
Brite
KEGG Orthology (KO) [BR:
eraf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eraf03400
]
J9537_05025
DNA repair and recombination proteins [BR:
eraf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J9537_05025
Archaeal homologous recombinant proteins
J9537_05025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
AP5B1_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QXJ60142
LinkDB
All DBs
Position
1023614..1026736
Genome browser
AA seq
1040 aa
AA seq
DB search
MLPKKIIMENFGPFLHEEVDFEEMSDAPLFLISGKTGAGKTTIFDAITFALYGDASGGVR
SSNEIRSSFAEPTEETRVQFLFEHQGRQYSIERWPKQTLAKKNGKGETTKNQKVQLSIYN
DAGQEAEAYTKVDAVNEVIYQILHLQKDQFRQIVMLPQGEFRTFLNANSTEKETVLRSLF
GTNIYRNFTDSLKQQKSELEKSVSELTTRIDQLFQQVISEKGATYEESLIFAKDYLLEEE
QALQKSQKELAGKQAEQKALQQKFQHAQELCEKFNQAEETQQQLLELEEQLPEQAEKKSR
LVQAQKIEKLRPTYERVQELELLQKKKNQEADENQQQAEALETSYAEYQRITADFEKSKS
EWAAKEKELQSLESFRPLVEQREKLTTQKAEFVEQQTQQQTQLTLINEKIKACEEKQKTL
EAKRQTEKAWQERRYEELQYQQKILQLQELDKQIFDQQEEEEDQQIKLAQLVETASRTSN
QLTSETAIYKKLKSQWASAEIARLSMDLLPGEPCPVCGSKEHPNPAQHEEMSTENLGQLQ
VALETQEARIKQLELQKEQAEARYEVAMKAFDHLQNERLAAQESLEQQLQDCQKAFQEYY
QLEVAAEIAELKEFLKQQQAETTQALLEITEADHALQQMTTELTEDRTKKQEAEASLHTI
NGELQTLQGRIAGLEEQTAAWQLAELEFRIKELSESLSEYREQLLAHEKRMKETEQQRIR
LQENQKLLTKQQLETSESLQQYQEQLQQQFVEAGLDMTDLTAPALNLSVLEKEIATFDQE
LLVLRDRQERLKAVIKGREKPELAPLQQQLAEKEEELSQFQQQHYGKENQLRQQRELVEA
IEALQQQSKGQLDELSQMIQLYQTMNGDNPQKISLERYVLQWYLAEVLQSANQQLNQLTK
GRYRFELKQETGRSKGNTGLEINVYDDNAGATRSSHTLSGGESFIAALSLALGLAEVIQN
QAGGVTIEALFIDEGFGSLDEEALEMAMEALEGIENAGRMIGIISHVRELKERIPQQIIV
ETSGTGRSSIRYQLEGWSET
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgaagaaaataatcatggaaaatttcggtccgtttcttcatgaagaagtggac
tttgaagaaatgtctgatgcgccgctgtttttgatcagtggaaagacaggtgcgggcaag
actacgatttttgatgccatcacctttgctttatacggagatgcttccggtggggtccgc
tcatcaaatgaaattcgctcgtcctttgctgagcccacggaagaaacccgcgttcaattt
ctatttgaacatcaaggacggcaatattcgattgagcgctggcctaaacaaacattggct
aagaaaaacggtaaaggcgagacaacgaagaatcaaaaagttcaactgagtatttataat
gacgcaggtcaagaagcggaggcctatacaaaggttgatgcggtgaatgaagtgatctat
cagattctgcatttacaaaaggatcaatttcgtcagatcgtgatgctgccgcagggagag
tttcgaaccttcttaaatgccaacagtacagaaaaagaaacggtgttacgcagtttattc
ggaacgaatatttatcgtaattttaccgatagcctgaagcagcaaaagagcgaattggaa
aaatcagtcagcgagctgacgacccgcattgatcagctgtttcagcaggttatcagtgaa
aaaggagccacctatgaagaatctctgatttttgcgaaggattatcttttggaggaggaa
caggcgcttcaaaagagccaaaaggagttggcgggaaaacaggcggagcaaaaagcgctt
cagcagaaattccagcatgcgcaggagctttgtgagaaattcaatcaagcagaggaaacc
cagcagcagctactggaattagaggaacagcttcctgaacaggcggagaaaaaaagtcga
ctagttcaggcacaaaaaatcgaaaaattgcgaccgacctatgagcgggtccaagagttg
gaacttcttcaaaaaaagaaaaatcaagaagctgatgaaaatcaacaacaagcagaggcg
ttagagacaagctatgcggaataccaaagaattaccgctgattttgaaaaaagtaagtct
gaatgggcagcgaaagaaaaagaactgcaaagcttagaatcttttcggcctttagttgaa
caaagggagaagctaacgacgcaaaaagcggagttcgttgaacaacagacccagcagcaa
acccaactgacgttgatcaatgagaaaataaaggcttgtgaagaaaagcaaaaaacgttg
gaagccaagcggcagactgaaaaagcttggcaggagcgacggtatgaggaactgcaatat
cagcaaaaaattctgcaattgcaagagctggataagcagatctttgatcaacaggaagag
gaagaagatcagcagatcaagcttgctcaattagttgaaacagcgagtcgtactagcaat
caattgacgagtgaaacagcaatctataagaaattaaagagtcaatgggcatctgcggag
attgctcgcttgagtatggatcttctaccgggtgagccttgtccggtttgcggctcgaag
gagcatcctaatcctgcacagcatgaagaaatgtctacggaaaatctgggacaattgcag
gtagcactcgaaacacaagaagctcgtatcaaacagctggaactacaaaaggagcaagca
gaagctcgctatgaagtagcgatgaaggcatttgaccacctgcaaaatgaacgcttagcc
gcgcaggaatctctggagcagcaacttcaagattgccagaaggctttccaggagtattat
cagctagaggtagctgctgaaatagcggagcttaaagagtttctcaaacagcaacaggct
gaaacaacgcaggctttgcttgagatcactgaagccgatcacgcgttgcaacaaatgaca
acagaactcactgaggatcgaaccaaaaaacaggaggctgaagcaagtcttcatacaatc
aatggtgagctgcaaacgctccaaggcagaattgctggattagaagagcagacagctgct
tggcaattagcagagcttgaattccgtatcaaggaattatcagaaagcctgtcagagtac
cgtgaacaacttctagcacacgaaaagcggatgaaggaaacggagcagcagcggattcga
ttgcaagagaaccaaaagctgttgacgaagcagcagcttgaaacatcggagagtctgcag
cagtatcaggaacaattacagcaacaattcgttgaagcaggcttagacatgaccgattta
acagcgccagcgcttaatctttcagtattggaaaaagagattgcgactttcgatcaagag
ttattggttttaagagatcgacaggagcgtttaaaagcagtcatcaaagggcgagaaaaa
cccgagttggcgcctctacagcagcagttggcggaaaaagaagaagagctctcccaattc
cagcagcagcattatggaaaggaaaatcaattgcgtcagcagcgtgagctggtcgaagca
atcgaagcgctccagcagcaaagtaagggacagttggatgaattgagccaaatgatccag
ctgtatcagacgatgaacggggacaatccacaaaaaatcagtttggagcgttatgtgctg
caatggtatctagctgaggtgctgcaaagcgccaatcagcagctgaatcagctcacgaaa
ggtcgatatcgctttgaattaaagcaggagaccggacgttcgaagggcaatacaggcttg
gagatcaacgtatatgatgacaatgccggtgcgacccgcagttcccatacactgtcaggc
ggtgaaagctttattgctgcactttctctggcattagggctggcggaagtgattcaaaac
caagctggcggcgtgacgattgaagcactatttattgatgaaggcttcggctctttagat
gaagaagcgttagaaatggcgatggaggccttagaaggcatcgaaaatgcggggcggatg
attggtatcatcagtcacgtaagagagttgaaggaacgtatcccacaacaaattattgtg
gaaactagcggaacgggacgcagcagtattcgttaccagctagaaggatggagtgaaacg
taa
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