Eremothecium cymbalariae: Ecym_2010
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Entry
Ecym_2010 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
erc
Eremothecium cymbalariae
Pathway
erc03082
ATP-dependent chromatin remodeling
erc03083
Polycomb repressive complex
erc04213
Longevity regulating pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Ecym_2010
03083 Polycomb repressive complex
Ecym_2010
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
Ecym_2010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
erc03036
]
Ecym_2010
Enzymes [BR:
erc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
Ecym_2010
Chromosome and associated proteins [BR:
erc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
Ecym_2010
HDAC complexes
Sin3A-HDAC complex
Ecym_2010
BRAF-HDAC complex
Ecym_2010
REST complex
Ecym_2010
SHIP complex
Ecym_2010
MiDAC complex
Ecym_2010
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
Ecym_2010
Heterochromatin formation proteins
Other heterochromatin formation proteins
Ecym_2010
Chromatin remodeling factors
NuRD complex
Ecym_2010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
11472983
NCBI-ProteinID:
XP_003644587
UniProt:
G8JNG0
LinkDB
All DBs
Position
2:complement(12699..14000)
Genome browser
AA seq
433 aa
AA seq
DB search
MVFVQKPFDDLTVNSSQKKRVAYFYDADVGNYAYGAGHPMKPHRIRMTHSLIMNYGLYKK
MEIYRAKPATKQEMCQFHTDEYIDFLSRVTPDNLDMFQKESVKFNVGDDCPVFDGLYEYC
SISGGGSMEGAARLNRGKCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRV
LYIDIDVHHGDGVEEAFYTTDRVMTCSFHKYGEFFPGTGELRDTGVGKGKYYSVNVPLRD
GIDDATYKSVFEPVIGKIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNYVKS
FGIPMMVVGGGGYTMRNVARTWAFETGLLNNIVLDEELPYNDYYEYYGPDYKLDVRPSNM
FNVNSPEYLDKVLMAIINNLEHTKYAPSVQLNHVPRDPEDLGDVEEDTHEAKDTLGGSQF
ARDQIVEKENEFY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggtatttgtacagaaaccttttgatgatcttactgttaactcctctcagaagaaaaga
gtcgcgtacttttatgacgctgatgtagggaactacgcttatggagcaggtcatcctatg
aagccccatagaataagaatgacacactcattaataatgaattatggcttgtataagaaa
atggaaatatacagggcaaagcctgctacaaagcaagagatgtgtcagtttcatacagat
gagtacattgattttctatctcgtgtaactccagataacctagacatgtttcaaaaagaa
agtgtaaaatttaacgttggtgatgattgtcccgtatttgatggtttatatgagtattgt
agcatatctggtggtggttctatggaaggtgcagctcgtttaaaccgcggcaaatgcgac
gttgctattaactatgcaggcggtctacatcatgctaaaaaatctgaagcttctggtttt
tgttacttgaacgacattgtcttaggtatcattgaattgttgagatatcatccaagagtt
ctttacatagatatcgatgtacatcatggtgatggtgttgaggaggctttttatactact
gatcgtgttatgacatgctctttccacaaatacggtgaatttttccccggtactggtgaa
ctgagggataccggtgttggaaaaggtaagtattattccgtgaatgtgccattgagggat
ggtattgatgacgcaacctataaatctgtttttgaacctgtcattggaaaaattatggaa
tggtatcaaccatctgcagtagttttgcagtgtggaggagattctctttctggtgatcgt
ttaggttgcttcaatttatccatgagagggcatgcgaactgtgtgaactatgtcaaatcc
tttggcattccaatgatggttgtcggtggaggtggttatacgatgagaaacgttgcccgt
acttgggcttttgaaacaggtttactaaacaatatcgtcttagatgaagagctaccatac
aatgattattacgagtactatgggccagattataaattggacgttaggccttctaatatg
ttcaatgtaaatagtccagaatatttggataaagtcctaatggctataataaacaatcta
gaacacacaaaatatgctcctagtgttcaattaaatcatgtgcctagagatcctgaagat
ctaggtgatgtcgaagaagatacgcatgaagctaaggacactcttggtggttcacaattc
gccagagatcaaattgtagaaaaagaaaatgaattctattga
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