Eremothecium cymbalariae: Ecym_3275
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Entry
Ecym_3275 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K14799
pre-rRNA-processing protein TSR1
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
erc03009
]
Ecym_3275
Ribosome biogenesis [BR:
erc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
Ecym_3275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Motif
Other DBs
NCBI-GeneID:
11470976
NCBI-ProteinID:
XP_003645585
UniProt:
G8JRJ9
LinkDB
All DBs
Position
3:519806..522169
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AA seq
787 aa
AA seq
DB search
MAGHSHRSSVKNGHKSFKSKHASKGALKRMNKGKVERENNGTGKSVKVVSRLDRKNLTNQ
LRQKKLLDTARIRKLFEGLHGAPKVVTVIPLTPDVDAGDIVKKLINSGDLDPSGQFSGPW
NYSTPSVTNFKVDKFKTTLKLIVPDMSNFINIMDSAKVADFVVFGLSGTSEVDSVFGEQV
IRVLELQGIASYMGVVANLSKVHPKEKFQLDVKQSLESYFRHFFPSEDRIYNLEKSSEAT
NALRVLCQKYPRAVQWRDSRGYLIADSIDFEEGVQGSGDLIVEGVVRGVGLHSNRLIHLP
GLGDFMLSKIEKVASSSRASKASSDNSAVNNVFLPDQNRDTLEEFAPEDLEMEELSDNDE
FEYANLSSVRYDDHGFLPGREQPMKRVKVPKGTSEYQARWYLEDVVDVDEEDDDDERRLM
PEAVGEIDDEFMADVAEAQPVDPLEVNAESETLEDMHVDFPAEEEERQLRAYRELEKDDL
EFPDEIELDPSESAIERLKRYRGLKSLHNCVWDADEKDPHAPPEWKRLLRLGNYKNIKRQ
VNKEVGAGAQVVAGDRVRIYIQFPKHLLDKIVETNLLAFTVYGLLPHEHKQAMANLSIQR
WEGYEDPIPSNEPVVVQYGVRRYTIQPQFSSASNSPNNVHKYERFLHHNTVSIATCFLPL
DLTQSPALYFKPDAQDPKGLQLIGHGSFLNVDHNRILAKRIILTGHPFKFHKRVITVRYM
FFRPEDVEWFKSIPLFTKSGRTGFIKESLGTHGYFKATFDGKLSAQDTVAMPLFRRVWPS
TSIAWQY
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcactctcataggtcttccgtcaagaatgggcataagtcatttaagtccaaa
catgctagtaaaggagcacttaaaaggatgaacaaaggtaaagttgaaagagagaataac
ggcacagggaagtcagttaaagttgtttctaggttagatagaaagaatttaacgaaccaa
ttgaggcagaaaaagcttttggacactgctaggataaggaagttgtttgaagggttgcat
ggtgctcctaaggttgtgacggtgattccgttgacacctgatgtcgatgctggtgatatt
gtgaaaaaactaattaattctggagatttggatcccagtgggcagttttctggaccgtgg
aattattcgactccatctgtgaccaattttaaggtggataagttcaaaaccaccttgaaa
ctgattgttccggatatgtcaaattttattaacataatggattcggccaaagttgctgat
tttgttgtctttgggttaagcggtacatctgaagtagattctgtctttggagagcaggtc
attcgggtgctagaacttcagggtattgcttcttacatgggtgttgttgcaaacttatcg
aaagtccatcccaaagagaagtttcagttagatgtgaagcagtctttggaaagttatttt
agacattttttccccagtgaagaccgtatttacaatcttgagaagtcttcggaagcgacg
aatgcactaagggtgctgtgtcagaaatatccaagggcagtacagtggagggattccaga
gggtatttgattgcagattcaattgattttgaggagggcgttcaaggttctggggactta
attgtagaaggtgtagtacgtggtgttggcttacattcaaataggttgatccatctccca
gggttaggtgattttatgctttcaaaaattgagaaggttgcttccagttccagagctagt
aaagcatctagtgataactctgccgtaaacaatgtgtttttaccagatcagaaccgagac
actttggaagagtttgctccggaagatctcgagatggaagaattgtctgataatgatgag
ttcgaatatgcgaacttgtcttccgtgaggtacgatgaccatggttttttgcctggtagg
gaacagcctatgaagagggtaaaggtccctaaaggaacctccgaataccaagccagatgg
taccttgaagatgtagttgatgtcgatgaagaagatgatgatgatgaacgccggctgatg
cctgaagcagttggcgaaatagatgatgaatttatggcagatgttgctgaggctcaacct
gtcgatcctttagaagtaaatgctgaatccgaaacacttgaagatatgcatgtggacttt
cctgcagaagaagaagaacgccagctaagagcataccgtgaattagaaaaggacgacttg
gaatttccagatgaaattgagttggatccatcggaatctgcaatagaacgtttaaagagg
tatcgaggattaaaaagcttgcataactgtgtttgggatgctgacgaaaaagatccacat
gctccaccagaatggaagcgtctattgaggcttggaaattacaagaatattaagcggcag
gttaataaagaagtaggcgcaggagcgcaggtggtagcaggtgatagagtcagaatttat
atccagtttcctaagcatctgttggataagatcgttgaaacaaatttattggcttttact
gtctacggcttacttccgcacgaacataaacaagcaatggctaacttgtctatacagaga
tgggaagggtatgaagatccaattccatctaatgaacctgtagttgttcaatatggagtt
agaaggtatacaattcaacctcagttttcttctgcatcaaattcccccaacaacgttcat
aagtatgaaagattcctgcatcacaatactgtttctatagccacatgttttcttccattg
gatttgactcaatctcctgcactttacttcaaacctgatgcgcaagatcctaagggtcta
caactcatcggacatggctccttcttaaatgttgatcacaacagaatcctggcgaagaga
ataatattaacaggtcatccattcaagttccacaaaagagttatcacagtgcgttacatg
tttttccgaccagaagacgtggaatggttcaagtcaattccattgtttaccaaatcaggt
agaactggtttcattaaagaaagtcttggaactcatggttactttaaggccacatttgat
ggtaaattatcggctcaagacactgttgcaatgccattattcaggcgtgtttggccaagt
acatctattgcttggcaatattag
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