Agathobacter rectalis ATCC 33656: EUBREC_1484
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Entry
EUBREC_1484 CDS
T00909
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ere
Agathobacter rectalis ATCC 33656
Pathway
ere03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ere00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EUBREC_1484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ere03021
]
EUBREC_1484
03019 Messenger RNA biogenesis [BR:
ere03019
]
EUBREC_1484
Transcription machinery [BR:
ere03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EUBREC_1484
Messenger RNA biogenesis [BR:
ere03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EUBREC_1484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_14
Spore_III_AA
AAA_25
AAA_22
Mor
NACHT
AAA
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ACR75238
UniProt:
C4Z907
LinkDB
All DBs
Position
1365130..1366470
Genome browser
AA seq
446 aa
AA seq
DB search
MEQMREKYESLSAFVLKDLAKARGIKGVSSLKKGQIIERMLEEDAKEAEEAEKNGTAEER
ANSFKDDYAALDSGEEAEGILEVMPEGFGFIRCDNYMPGDHDIYVAPAQIRRFNLKTGDI
VKGNMKVKSEREKFQALLYLTTVNGYTPDVAQKRTSFEDLVPIFPNERLRLERPGASVAM
RVVDLISPIGKGQRGMIVSQPKAGKTTLLKEVAKSVTVNNPEMHLIILLIDERPEEVTDI
KEAIEGNNVEVIYSTFDELPEHHKRVSEMVIERAKRLVEHGNDVMILLDSITRLARAYNV
TVPPSGRTLSGGLDPVALHMPKRFFGAARNMRNGGSLTILATALVDTGSKMDDVVFEEFK
GTGNMELVLDRKLSEKRIFPAIDIVKSGTRREDLLLDEDEQAAVDNMRKAFNGMRSDEAV
ENVLNMFAHTKSNKEFVNLVKKNRIL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaacagatgagagaaaaatatgaaagtttgtcggcatttgtgcttaaggatctggcg
aaggcaagaggaattaagggcgtttcatcactgaaaaagggacagattattgaaagaatg
ctcgaggaggatgcaaaagaggctgaggaggctgagaaaaacggtacagccgaggagcgc
gccaactcttttaaagatgattatgcagcactcgacagtggagaagaggcagaaggcata
cttgaggtaatgccggagggctttggatttatccgctgtgataattatatgccgggagat
catgatatctatgtggcacctgcgcagatacgccgcttcaatttaaagacaggtgatatc
gtaaagggtaatatgaaggtgaagtctgagcgtgagaaattccaggctcttttatacctg
acaactgtcaacggatatacaccggatgtagcacagaagcgtacaagctttgaggatctt
gtgcctatattcccgaatgagagactgcgtctcgagagacctggagcaagtgttgcgatg
agggttgtagatctcatctctccaataggaaagggacagcgaggcatgatcgtttcacag
cctaaggccggaaagaccacattacttaaagaggttgcaaagtctgtcactgtaaacaat
cctgagatgcatcttattattctccttattgatgagagaccggaggaggttacagatatc
aaggaggctatagaggggaacaatgtcgaggtaatctactctacatttgatgaacttcct
gagcatcacaagagagtgtcagagatggtaatagagagagcaaagcgccttgtagagcat
ggtaatgatgtcatgatactccttgacagcataacaaggcttgcaagagcttacaatgtg
acagttccaccatcaggccgtacactttcaggaggacttgatcctgtagcgcttcatatg
ccaaagagatttttcggagcagcacgtaatatgagaaacggcggcagtctgacaatactt
gcaacagctcttgttgataccggaagcaagatggatgatgtagtatttgaggagttcaag
ggaacaggaaacatggagcttgtgctcgacagaaagctttccgagaagaggatcttccct
gctatagatatagtaaaatcaggaacaaggcgtgaggatctgctccttgatgaggatgag
caggcagcagtcgataatatgcgtaaagccttcaacggcatgcgctctgatgaggctgtt
gagaacgtactcaacatgtttgcacacacaaagagcaacaaggaatttgttaatcttgta
aagaaaaacagaattttataa
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