Agathobacter rectalis ATCC 33656: EUBREC_1516
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Entry
EUBREC_1516 CDS
T00909
Name
(GenBank) putative ATP-dependent DNA-repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ere
Agathobacter rectalis ATCC 33656
Pathway
ere03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ere00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EUBREC_1516
09124 Replication and repair
03420 Nucleotide excision repair
EUBREC_1516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ere03021
]
EUBREC_1516
03400 DNA repair and recombination proteins [BR:
ere03400
]
EUBREC_1516
Enzymes [BR:
ere01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EUBREC_1516
Transcription machinery [BR:
ere03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EUBREC_1516
DNA repair and recombination proteins [BR:
ere03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EUBREC_1516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
PhoH
Rad4
Motif
Other DBs
NCBI-ProteinID:
ACR75270
UniProt:
C4Z948
LinkDB
All DBs
Position
1395144..1397612
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AA seq
822 aa
AA seq
DB search
MFSVLKMFGVRLKILPEHKTGNIIRNMQGEYMTEAGNNYSEKKTQLHISVRNLVEFIFRE
GDIDNRSSRAMSADAMMEGTRIHRKIQGSMGKEYQAEVPLSLVVEGDLYELTVEGRADGI
FTEDGKCFVDEIKGMYRKVELFEKPVFVHRAQAMCYAYIFALQNNMETIGIQMTYCNLET
EQTKYFREEFSFEEIKKWFDDLMEEYGKWATFQCEMKNQRQASIKELDFPYEYRPGQKKL
VSDVYRTIMRQKLLFMQAPTGVGKTISTIFPAVKAVGEELADRIFYLTAKTITATVAKET
FALLEKNGYRAKTIQITAKEKLCPCDEMECNPVTCPYAKGHFDRVNDAVFDLLHRCEMIE
RDDILSQADRYTVCPFELCLDTASWCDNVICDYNYVFDPNVYLKRFFQEGIKGDYIFLID
EAHNMVERSRQMYSAQIYKEDFLTVKRIMKEHSRSIEKALEKCNKILLGMKRECENYTVY
DTFGNMVFSFMRLMTLLDEFLQKANEFPGKKDVMDFYFELRNFLNIYDLVDEHYVMYSEL
EADGRFMLKLFCVDPSLNIQKRLDKGKSAVFFSATFLPVNYYKSLLSTKKDNYAIYADST
FDSKKRLLAMATDVSTRYTRRSRSEYERIAGYINAVVTQKTGNYMVFFPSYKMMNDVADI
YCEKYADETELMLQKNNMSEAEREEFLDRFSEESDRTLVAFGIMGGIFGEGIDLKNDRLI
GAIVVGTGLPQISNERTILKDYYDAENGCGFDYAFRYPGINKVLQAAGRVIRTTEDTGVI
LLLDERFWQREYDLLYPREWSDRKPCNIANVGKLVADFWEQI
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgtattaaaaatgtttggagttagactgaaaatattgccggaacacaaaacc
ggtaacataatccggaatatgcagggagagtacatgacagaagctggaaataactatagt
gaaaagaaaacacaattacatatttcggtcagaaaccttgtggaatttattttcagggag
ggtgacatagacaaccggtcatccagagctatgagtgctgatgccatgatggagggaaca
cgcattcacaggaaaatccagggcagcatggggaaggagtatcaggcggaggtgccgctt
tcacttgttgttgaaggtgatttgtatgagctgactgtcgagggcagggcagatggcatc
tttacggaggatggcaagtgttttgtcgatgagattaagggaatgtacagaaaggttgag
ctgtttgaaaagccggtttttgtgcaccgtgcgcaggctatgtgctatgcatatattttt
gctctgcaaaataatatggaaacgataggcattcagatgacctactgcaatctggaaacg
gagcagactaagtattttcgcgaggagttctcatttgaagagataaaaaaatggtttgat
gacctgatggaagagtatggcaaatgggcaacgtttcagtgtgaaatgaaaaatcaaaga
caggcttcaatcaaagaactcgattttccatatgagtacagaccggggcagaaaaagctt
gtttcggatgtctacaggacaattatgcgtcagaagcttctttttatgcaggctccgacc
ggtgtgggaaagactatctctactattttcccggcagtgaaggcggttggtgaggagctg
gcagacagaatcttttacctgacagcgaagaccatcaccgcaacagttgcaaaggaaacg
tttgcgctgcttgaaaaaaatggttacagggcaaaaactattcagataacggccaaggaa
aagctatgtccgtgtgatgagatggaatgcaatccggtaacctgtccgtatgcaaagggg
cattttgacagagtaaatgatgcggtttttgacctgcttcacagatgtgaaatgattgag
agggatgatattttatcacaggcggataggtataccgtttgtccgtttgagctttgtctt
gatacggctagctggtgtgataatgtcatctgcgattacaactatgtgtttgacccgaat
gtttatcttaagagattttttcaggaggggataaagggagattatatttttctcattgat
gaggctcacaatatggtcgaaagaagcaggcagatgtatagcgctcagatttataaggag
gatttccttactgtgaagcgcattatgaaggagcacagccgctctattgagaaagcgctt
gaaaagtgcaataagatactgcttgggatgaagcgggagtgtgagaattacacggtatat
gatacatttggcaatatggtattttcctttatgaggcttatgacacttctggatgagttt
ttgcagaaggctaatgagtttccggggaaaaaggatgttatggatttttattttgagctt
cgcaatttcctgaacatttatgatctggtggatgagcactacgtgatgtattccgagctt
gaggctgatggcaggttcatgctaaagcttttttgcgtggacccgtcgcttaatatacaa
aagaggctggataagggcaagtcagctgtgtttttttcggcgacatttttgcctgtaaac
tattacaagagcctgctaagcacaaaaaaagacaactatgccatatatgctgacagtacg
tttgacagcaaaaagaggctgcttgcgatggcaaccgatgtgagcacgaggtacacgagg
cgctcaaggagtgagtatgagcggattgcaggatatattaatgctgttgtcacgcaaaag
actggaaattatatggttttctttccgtcatataagatgatgaatgatgtggcagatatt
tactgtgaaaaatatgcagacgaaacagagcttatgctgcagaaaaataatatgtcagag
gctgagagggaggaatttctggacaggtttagtgaggaatcggacagaacacttgtggca
tttggtatcatgggaggcatattcggtgagggcattgatttgaaaaacgacagactgata
ggtgctattgttgtcggaacggggcttccgcagatcagcaatgagagaactatattaaag
gattattacgatgccgaaaacggctgtggctttgactatgctttcaggtatccgggcata
aataaagtcctccaggcggccggaagagtaatcaggacgacggaggacacaggtgtcatt
ttgctattagatgagagattctggcagagagaatatgatttgctctatccacgcgagtgg
agtgacagaaagccatgcaatatagcaaatgtcggaaaactagttgccgacttctgggag
cagatttaa
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