Erwinia sp. Ejp617: EJP617_23450
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Entry
EJP617_23450 CDS
T01935
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
erj
Erwinia sp. Ejp617
Pathway
erj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJP617_23450 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erj03019
]
EJP617_23450 (rhlE)
Enzymes [BR:
erj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EJP617_23450 (rhlE)
Messenger RNA biogenesis [BR:
erj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EJP617_23450 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADP12026
LinkDB
All DBs
Position
2563776..2565185
Genome browser
AA seq
469 aa
AA seq
DB search
MSFDSLGLNADILRAVAEQGYNEPTPIQRQAIPVVLAGRDLMASAQTGTGKTAGFTLPLL
QLLSSHNPHPKGRRPVRALILTPTRELAAQVGENVQDYSKYLDMRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNALDLSKVEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKILAEKLLHNPEQVEVARRNTASEQVTQHVHLVDKKRKRELLSLLI
GRGNWQQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALSDFKDGKIRVLV
ATDIAARGIDIEELPHVVNYELPNVPEDYVHRIGRTGRAAAVGEALSLVCVDEHKLLRDI
ERVLKREIPRMAIDGFEPDPSIKAEPIINGRQQQRGGGGGRGRGGQGQAPRGGSDRSASA
NRSGNGGERRQGNGNSAGAARGARPEGGTGGAPRVNKTRPRRANPANNG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctctcggcctcaatgccgatattttgcgcgctgttgcagaacagggc
tataacgagccaacgcctattcagcgtcaggcaatcccggtagtgcttgctggacgagac
ctgatggccagcgcccagacggggacgggtaaaaccgcaggttttactctgccattactg
caattgctgagcagtcacaacccgcacccgaaaggccgccgaccggtgcgcgccctgatc
ctgaccccgactcgtgaactggcggcccaggttggcgaaaacgtgcaggactacagcaaa
tatcttgatatgcggtcgctggtggtatttggcggcgtcagcattaacccgcagatgatg
aaactgcgcggcggtgtggacgtgctggtggcgacgcctggccgtctgctggacctggaa
catcagaacgcgctggatctgtcaaaagtggaaatcctggtactggacgaagcggaccgc
atgctggatatgggctttattcatgatatccgccgcgtgctggcaaaactgccggccaaa
cgtcagaacctgctgttctcggcgaccttctctgacgaaatcaaaatcctggcggaaaaa
ctgctgcacaacccagagcaggtcgaagttgcccgccgcaataccgcttccgagcaggtg
acccagcatgttcacctggtggacaaaaaacgcaagcgcgagctgctgtccttgctgatt
ggtcgcggcaactggcagcaggtgctggtgtttacccgtaccaaacatggtgctaaccat
ctggccgagcagctgaataaagacggcatcaccgccgccgccattcacggtaataagagc
cagggcgcacgtacccgcgcactgagtgattttaaagacggtaaaatccgcgtgctggtg
gcaacggacattgcagcgcgtgggatcgatatcgaagagctgccacacgttgtgaactac
gagctgcctaacgtgccggaagactatgtccaccgtatcggtcgtaccggtcgtgcggcg
gcggtcggtgaagcgctgtcgctggtgtgcgttgacgagcacaagctgttacgcgatatc
gaacgcgtgctgaagcgtgagatcccgcgtatggcgatcgacggttttgaaccggaccca
agcatcaaagccgagccgatcattaatggtcgtcagcagcagcgtggcggcggtggcgga
cgtgggcgcggcggccaggggcaagccccccgaggcggcagcgatcgtagcgccagcgca
aaccgtagcggtaacggcggcgaacgccgccagggtaacggcaacagtgccggtgccgcg
cgcggtgcacgtcccgaaggcggcaccggtggcgcaccacgcgtcaacaaaacccgtcca
cgccgcgccaacccggcgaataacggctaa
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