Erysipelothrix larvae: AOC36_05025
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Entry
AOC36_05025 CDS
T04263
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
erl
Erysipelothrix larvae
Brite
KEGG Orthology (KO) [BR:
erl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erl03019
]
AOC36_05025
03009 Ribosome biogenesis [BR:
erl03009
]
AOC36_05025
Enzymes [BR:
erl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AOC36_05025
Messenger RNA biogenesis [BR:
erl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AOC36_05025
Ribosome biogenesis [BR:
erl03009
]
Prokaryotic type
rRNA helicases
AOC36_05025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrA_inter
Flavi_DEAD
Terminase_6N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMC93360
UniProt:
A0A109UGX5
LinkDB
All DBs
Position
complement(1089738..1091069)
Genome browser
AA seq
443 aa
AA seq
DB search
MNSLNKDIMRIAGFKSLTSVQSQVLEQINKNRDMIVRSATGTGKTHAFLFALCEKINFNV
QETQALILAPTRELAMQIFEFSKDLRKVDESITIDLAIGGMDNSRLKRKIEKQPHILIAT
PGKMLDILSWNTLRVDTIKMLILDEMDMIFDYGFSEEINSIASRLLDSTQFLLFSATLPR
SLEPFIKKYLNHPIEIHATEERMKPRIEFSLIHRKHWDLNEAVTEVLRSIEPLLAVVFAN
RKEEVSEIAQRLRENGFECLEIHGDISDRERKQTISRLRSGQVRYIVATDLAARGIDLPE
ISHVINANLPAHDISFFMHRAGRTGRSGREGYCITLVTDSDQNTISRIRNQNNVSFKFKR
IQQHVIVDARPFFNFERRHRRLDPEIQAKLKRKNVKVKPRYKKKHKNEIEKLMRHKRREI
IRDDIRRQKKERNKERQKSMQDL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaattcccttaataaggatattatgagaattgcgggttttaaaagcctcacttccgta
caatcacaagtattagaacaaattaataaaaacagagacatgatcgtccgttccgcaact
ggaacggggaagacacatgccttcctttttgcattgtgtgaaaagatcaattttaatgtg
caagaaacgcaagctttaatcttagcaccaacgcgagaactcgcaatgcaaatttttgag
ttctccaaagatttacgtaaagttgatgagagtattaccattgatttagcgattggtggt
atggacaacagtcgtttaaaacgtaaaatcgagaaacaacctcatatccttatcgcaaca
ccgggtaaaatgttagatattctttcttggaatacattgcgcgttgacaccattaagatg
cttattcttgatgaaatggatatgatttttgattatggattttctgaagaaatcaattca
attgcatcaagactgcttgatagcacacaattcctattgtttagtgctactttgccacga
tcacttgaaccgtttatcaagaaatatctaaaccaccccattgaaatccacgctaccgaa
gaacgcatgaaacctcgaattgagttctcattaatccatcgaaaacattgggatcttaat
gaagcagtcacagaggtgttacgttccattgaacctcttttagcggttgtatttgcgaat
cgtaaagaagaagtttccgaaattgcacaacgccttcgtgaaaatggctttgaatgtctt
gaaatccatggtgatattagcgatcgtgagcgtaaacaaacaatctcacggttacgttcg
ggtcaagttcgttacatcgttgcgacagacctcgctgcgcgaggcattgatttacctgag
atctctcacgtaatcaacgcaaaccttcctgcacatgacatttcatttttcatgcaccga
gcaggccgtacagggcgttcagggcgtgaagggtattgcattacacttgtaacggattcg
gatcaaaacacaatctcaagaattcgcaatcaaaacaatgtttcctttaagtttaaacgg
attcagcaacatgtgattgtggatgctcgtccattctttaactttgaacgacgccatcgt
cgtttagatcctgagattcaagcaaaacttaaacgcaaaaacgttaaagtaaaaccacgt
tacaagaaaaagcataaaaatgaaattgaaaaattgatgcgtcataaacgaagagaaatc
attcgtgatgatattcgtcgtcaaaagaaagaacgcaacaaagagcgtcaaaagagcatg
caagatttgtag
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