Encephalitozoon romaleae: EROM_110090
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Entry
EROM_110090 CDS
T03458
Name
(RefSeq) RNA polymerase II transcription
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
ero
Encephalitozoon romaleae
Pathway
ero03022
Basal transcription factors
ero03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EROM_110090
09124 Replication and repair
03420 Nucleotide excision repair
EROM_110090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ero03021
]
EROM_110090
03400 DNA repair and recombination proteins [BR:
ero03400
]
EROM_110090
Transcription machinery [BR:
ero03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EROM_110090
DNA repair and recombination proteins [BR:
ero03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EROM_110090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
TF_Zn_Ribbon
zf-UDP
ZNF512_C2H2
zinc-ribbons_6
zf-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
20564608
NCBI-ProteinID:
XP_009265490
UniProt:
I6ZKZ6
LinkDB
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Position
XI:complement(8940..9611)
Genome browser
AA seq
223 aa
AA seq
DB search
MEERRCPVCKSDIYLNPDIVIYISPCFHKMCESCMLRIFNRGQAPCPECGTMLRKINYIK
PTFEDITVEKECKVRKVLMKVFGREEEEFADVAKYNDYLEKFEEFVFEVLNIKGESLVKE
RIKEIQDMGEGSILNPIPKTIPGKSVLQTRKRQSHDLKEERSKIQKIAITTDYFDPEELP
RIISNPAREIYLPKGFLNPSLPGGLSYDIIISFAISSLYNPSI
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaggcggtgtccagtatgtaaaagtgatatttatttgaatccggacatagtt
atatacataagtccttgcttccataagatgtgcgagtcatgcatgcttaggatatttaat
agagggcaggcaccttgtcctgaatgcgggacaatgctaaggaagataaactacattaag
ccaacctttgaagatataacagttgaaaaagaatgtaaggtacgaaaggttctgatgaag
gtcttcggaagggaagaagaagaatttgcagacgttgcaaaatacaatgattatcttgag
aaattcgaggagtttgttttcgaagttctaaacataaaaggtgaatccctcgtgaaggaa
agaataaaggagatccaggatatgggagaaggctccattcttaaccctataccaaaaact
attcctggaaagagcgtccttcaaaccagaaaaaggcaaagccacgatctgaaggaggaa
aggagcaaaatacaaaagatagccattactaccgattactttgacccagaagaactccca
agaataatatcaaatcctgctagagaaatctatctaccaaaaggctttcttaaccccagc
cttcccggtgggttatcctatgatataattatatcctttgctatctcatcgctgtataac
cctagtatatag
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