KEGG   Encephalitozoon romaleae: EROM_110090
Entry
EROM_110090       CDS       T03458                                 
Name
(RefSeq) RNA polymerase II transcription
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
ero  Encephalitozoon romaleae
Pathway
ero03022  Basal transcription factors
ero03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ero00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    EROM_110090
  09124 Replication and repair
   03420 Nucleotide excision repair
    EROM_110090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ero03021]
    EROM_110090
   03400 DNA repair and recombination proteins [BR:ero03400]
    EROM_110090
Transcription machinery [BR:ero03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     EROM_110090
DNA repair and recombination proteins [BR:ero03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     EROM_110090
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-C3HC4 zf-RING_5 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX TF_Zn_Ribbon zf-UDP ZNF512_C2H2 zinc-ribbons_6 zf-RING_4 zf-RING_16
Other DBs
NCBI-GeneID: 20564608
NCBI-ProteinID: XP_009265490
UniProt: I6ZKZ6
LinkDB
Position
XI:complement(8940..9611)
AA seq 223 aa
MEERRCPVCKSDIYLNPDIVIYISPCFHKMCESCMLRIFNRGQAPCPECGTMLRKINYIK
PTFEDITVEKECKVRKVLMKVFGREEEEFADVAKYNDYLEKFEEFVFEVLNIKGESLVKE
RIKEIQDMGEGSILNPIPKTIPGKSVLQTRKRQSHDLKEERSKIQKIAITTDYFDPEELP
RIISNPAREIYLPKGFLNPSLPGGLSYDIIISFAISSLYNPSI
NT seq 672 nt   +upstreamnt  +downstreamnt
atggaggagaggcggtgtccagtatgtaaaagtgatatttatttgaatccggacatagtt
atatacataagtccttgcttccataagatgtgcgagtcatgcatgcttaggatatttaat
agagggcaggcaccttgtcctgaatgcgggacaatgctaaggaagataaactacattaag
ccaacctttgaagatataacagttgaaaaagaatgtaaggtacgaaaggttctgatgaag
gtcttcggaagggaagaagaagaatttgcagacgttgcaaaatacaatgattatcttgag
aaattcgaggagtttgttttcgaagttctaaacataaaaggtgaatccctcgtgaaggaa
agaataaaggagatccaggatatgggagaaggctccattcttaaccctataccaaaaact
attcctggaaagagcgtccttcaaaccagaaaaaggcaaagccacgatctgaaggaggaa
aggagcaaaatacaaaagatagccattactaccgattactttgacccagaagaactccca
agaataatatcaaatcctgctagagaaatctatctaccaaaaggctttcttaaccccagc
cttcccggtgggttatcctatgatataattatatcctttgctatctcatcgctgtataac
cctagtatatag

DBGET integrated database retrieval system