Erwinia rhapontici: LJN55_06395
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Entry
LJN55_06395 CDS
T08392
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
erp
Erwinia rhapontici
Pathway
erp00020
Citrate cycle (TCA cycle)
erp00785
Lipoic acid metabolism
erp01100
Metabolic pathways
erp01110
Biosynthesis of secondary metabolites
erp01120
Microbial metabolism in diverse environments
erp01200
Carbon metabolism
erp01210
2-Oxocarboxylic acid metabolism
Module
erp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
erp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LJN55_06395 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LJN55_06395 (sucA)
Enzymes [BR:
erp01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LJN55_06395 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
UDQ81472
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All DBs
Position
1349346..1352153
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AA seq
935 aa
AA seq
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MQNSAMKPWLDSSWLAGANQSYIEQLYEDFLTDPDSVDVAWKSLFQQLPGTGVRPEQFHS
TTREYFRRLAKDASRYTASVSDPETNAKQVKVLQLINAFRFRGHQQANLDPLGLWKQEAV
PDLDPAYHGLSEADFQESFNVGSFAIGKETLKLADLFAALQQTYCGSIGAEYMHMTNTEE
KRWIQQRLESVVGQASYSVEEKKGFLKQLTAAEGLERYLGAKFPGAKRFSLEGGDALVPM
LNEMIRHAGKSGTREVVLGMAHRGRLNVLINVLGKKPQDLFDEFSGKHKEHLGTGDVKYH
MGFSSDVETEGGMVHLALAFNPSHLEIVSPVVMGSVRARLDRLDEPASNKVLPITIHGDA
AVIGQGVVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPKDARSTQYCTDIGKMVLAP
IFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPVMYQKIK
KHPTPRKLYADKLEAEKVASLEDATEMVNLYRDALDAGECVVPEWRPMSLHSFTWSPYLN
HDWDEGYPESIELKRLQALAKRISTVPESVEMQSRVAKIYNDRAEMAAGNKPFDWGAAEN
LAYATLVDEGIPCRLSGEDMGRGTFFHRHAVIHNQANGSTYTPLQHVHNGQGIFKVWDSV
LSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSP
KSLLRHPQAVSSLEELASGAFLPAIGEIDNLDPKDVKRVVLCSGKVYYDLLDKRRKNEQT
DVAIVRIEQLYPFPHKAVQDVLQQYSHVHDFVWCQEEPLNQGAWYCSQHHFREVVPFGAS
LRYAGRPASASPAVGYMSVHQQQQQDLVNDALNVE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacagcgcgatgaaaccctggctggactcctcctggctggccggcgcgaaccag
tcctacatagagcagctctatgaggactttttaaccgatcctgactctgtcgatgtggcc
tggaagtctcttttccagcagcttcctggaactggggttagacctgagcaatttcactcc
accacccgcgagtatttccgccgtctggcgaaagatgcttcgcgctataccgcctccgtc
agcgatcctgaaaccaatgctaaacaggttaaggtactgcaactgatcaacgccttccgt
ttccgcggacatcagcaagcaaacctcgacccgttaggcctgtggaagcaggaagctgta
ccggatctcgacccagcctaccatggtctgagcgaagccgatttccaggaaagtttcaat
gtcggttcctttgccattggtaaagagacactgaagctggcggatctgtttgcggcgctg
cagcaaacctattgcggttcgatcggtgcggaatatatgcacatgaccaacaccgaagaa
aaacgctggatccaacagcgtctggaatcggtggtggggcaggcatcttactctgttgaa
gagaaaaagggcttcctcaagcagctgactgcagcagaaggtctggagcgctatctgggc
gcgaaattcccgggtgctaaacgcttctcactggaaggcggtgacgcgctggtgccgatg
ctgaatgagatgattcgtcatgccggtaagagcggtacgcgcgaagtggtgctgggtatg
gcacaccgcggccgtctgaacgtgctgatcaacgtgctgggcaaaaagccacaggacctg
ttcgacgaattctctggtaagcataaagagcatcttggcacgggtgacgtgaagtaccat
atgggcttctcatcggatgtggaaactgaaggcggcatggttcacctggcgctggcgttt
aacccatcacatctcgagattgtcagcccggtggtcatgggatctgtccgcgcccgtctt
gaccgtcttgatgaacctgccagcaacaaagtcttacctatcactattcacggtgatgct
gccgttatcgggcagggcgtggtgcaggaaaccctgaacatgtcgcaggcccggggttac
gaagtgggcggtacagtacgtatcgtgatcaacaaccagattggtttcaccacctcaaac
cctaaagatgcacgttcaactcagtactgtaccgatattggtaaaatggtgctggccccg
atcttccacgtcaacgcggatgacccggaagcggttgcctttgtcacccgtctggcgttg
gatttccgtaacacctttaaacgcgacgtgtttattgatctggtctgttatcgccgtcat
ggccataacgaagctgatgagccaagcgccacgcagcctgtgatgtaccagaaaatcaag
aaacacccgacgccgcgtaaactctatgctgacaagctggaagccgaaaaggtcgccagc
ctggaagatgccacggaaatggtcaacctgtaccgtgatgctctggatgcaggtgagtgc
gtggtaccggaatggcgcccaatgagcctccactctttcacctggtcgccgtatctaaac
catgactgggatgaaggctacccggaatctatcgaactgaagcgtttgcaggcactggca
aaacgcatcagcacggtaccggaatctgtcgaaatgcagtcccgtgtggccaagatttac
aacgatcgcgctgaaatggcggccggaaataagccgttcgactggggcgcagcagaaaac
ctcgcgtacgccacgctggtggatgaaggcattccatgccgtctttccggcgaggatatg
gggcgcggtacgttcttccatcgtcatgcggttatccataaccaggcgaatgggtcgacc
tacactccgttacagcatgtgcataacgggcagggcatcttcaaagtatgggactccgtg
ctgtcagaagaagccgtgctggcgtttgaatatggctatgccaccgcagaaccgcgcacc
ctgaccatctgggaagcacagttcggtgacttcgctaacggggcgcaggtcgttattgac
cagttcatcagctccggcgagcagaagtggggccgtatgtgtggcctggtgatgcttctg
ccacatggctatgaaggtcagggccctgagcactcctctgcgcgcctggagcgttacctg
caactttgtgcagagcagaacatgcaggtttgcgtgccgtctacacctgcgcaggtttac
cacatgctgcgtcgtcaggcgctgcgcggtatgcgccgtccgctggtggtgatgtcaccg
aagtcattgttacgtcatccgcaggcggtatcttcactggaagagttggccagcggagcg
ttcctgcctgccattggtgaaatcgacaatctcgaccctaaagacgtcaaacgtgtcgta
ctgtgttccggtaaggtgtattacgacctgctggataaacgtcgtaagaatgagcaaacc
gacgtcgctatcgtgcgtattgagcagctttatccgttcccacacaaagcggtgcaggat
gtgttgcagcagtattctcacgtgcatgattttgtctggtgtcaggaagagccactgaac
cagggtgcatggtattgcagtcagcatcacttccgcgaagtcgtgccgtttggggcttca
ttacgttatgccggtcgccctgcatctgcatctccggcagttggctatatgtccgttcac
cagcagcagcagcaagatctggttaatgacgcgctgaacgttgaataa
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