Cronobacter sakazakii ATCC BAA-894: ESA_00189
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Entry
ESA_00189 CDS
T00586
Name
(GenBank) hypothetical protein
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
esa
Cronobacter sakazakii ATCC BAA-894
Pathway
esa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ESA_00189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esa03019
]
ESA_00189
03016 Transfer RNA biogenesis [BR:
esa03016
]
ESA_00189
Enzymes [BR:
esa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ESA_00189
Messenger RNA biogenesis [BR:
esa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ESA_00189
Transfer RNA biogenesis [BR:
esa03016
]
Prokaryotic type
tRNA degradation factors
ESA_00189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
HTH_12
RNase_II_C_S1
Rho_RNA_bind
OB_Dis3
TFIIE_beta
Motif
Other DBs
NCBI-ProteinID:
ABU75490
UniProt:
A7MM96
LinkDB
All DBs
Position
172235..174700
Genome browser
AA seq
821 aa
AA seq
DB search
MSHDPFQEREAEKYANPIPSREFILEHLTKREKPANRDELASELGIEGEEQLEALRRRLR
AMERDGQLVFTRRQCYALPERLDLQKGTVIGHRDGYGFLRVEGRKDDLYLSSEQMKTCIH
GDIVLAQPLGSDRKGRREARIVRVLVPKQSNIVGRYFTDAGVGFVVPDDSRLSFDILIPP
EEVMGARMGYVVVVELTQRPTRRTKAIGKIVEVLGDNMGTGMAVDMALRTHEIPYVWPKA
VEEQIAHLKEEVPEEAKVGRVDLRNLPLVTIDGEDARDFDDAVFCEKKRGGGWRLWVAIA
DVSYYVRPPTPLDNEARNRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTIS
AKGRLTGYKFYEAVMSSHARLTYTKVWHILQGDEDLRSQYQPLVKHLEELHTLYKALEEA
RTERGGISFESEEAKFIFNAERRIDRIEQTQRNDAHKLIEECMILANISAARFVEKHKEP
ALFRIHDRPTNEAITSFRSVLAELGLELPGGNKPEPRDYAELLDSIADRPDHEMLQTMLL
RSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLTLHRAIKYLIAKEQGHEGNTTESG
GWHYTMEEMLQLGQHCSMTERRADEATREVADWLKCDFMQDQVGQTFSGVISSVTGFGFF
VRLTDLFIDGLVHVSSLDNDYYRFDQVGQRLIGESGGQTYRLGDRVEVKVEAVNMDERKI
DFSLISSERGPRNVGKTAREREKRGGGAKNRSRRQVGKRQNFEPNEAFRSEKGRGKVKKD
GAARAEKSDKPAKSSKKPSAKTQKIAAATKAKRAAKKQRDN
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgatccttttcaggaacgagaagctgaaaagtacgccaatcccatcccgagc
cgggaattcatccttgaacatttaaccaaacgtgaaaaaccggctaaccgcgatgaactg
gcgtctgaactcggcattgaaggcgaggaacagctggaagcgctgcgtcgccgcctgcgc
gccatggagcgcgacggccagttagtctttacccgccgccagtgctatgcgctgccggaa
cgtcttgatctgcaaaaaggcaccgtcatcggccatcgcgacggttacgggtttttacgc
gtcgaaggacgcaaagacgatctttatctctcgtctgagcagatgaaaacctgcattcac
ggcgatatcgtgctggcgcagccgctcggttcagaccgcaaaggccgccgcgaagcgcgt
atcgtgcgcgtgctggtgccgaagcagagcaatatcgtcgggcgctatttcaccgacgcg
ggcgtcggcttcgtggtgccggacgacagccgcctgagctttgatatcctcattccgccg
gaagaggtgatgggcgcgcgcatgggctatgtcgtggtcgttgagctgacacagcgcccg
acgcgccgcaccaaagctatcggtaaaattgttgaagtgctcggcgacaacatgggcacc
ggcatggccgtcgatatggcgctgcgcacccatgaaatcccttacgtctggccgaaagcc
gtcgaagaacagattgcgcacctgaaagaagaagtgccggaagaggccaaagtggggcgc
gtcgatttgcgcaacctgccgctcgtcaccatcgacggcgaagacgcccgcgactttgac
gacgccgtattctgtgagaaaaaacgcggcggcggctggcgcctgtgggtggctatcgcc
gacgtcagctactatgtacgtccgccgactccgcttgataacgaagcgcgcaaccgcggc
acgtcggtttacttcccgtcgcaggttgtcccgatgctgccggaagtgctctccaacggc
ctgtgttcgctgaatccgcaggtggatcgcctctgtatggtctgtgagatgacgatctcc
gccaaaggccgtctcactggctataaattctatgaagcggtgatgagctcgcacgcccgt
ctgacctacaccaaggtgtggcatattctgcagggcgatgaagatctgcgcagccagtat
caaccgctggtgaagcatcttgaagagctgcacacgctgtataaagcgctggaagaggcg
cgcaccgagcgcggcggtatctcgtttgagagcgaagaggcgaagttcatcttcaacgcc
gagcgccgtatcgatcgcatcgagcagacccagcgtaacgacgcgcacaagcttatcgaa
gagtgcatgatcctcgccaacatttcggcggcgcgctttgtcgagaagcacaaagagccg
gcgctgttccgtattcacgatcgcccgacgaatgaagcgatcacctcgttccgctctgtg
ctcgcagagctgggtctggagctgccgggcggcaacaagccggaaccgcgcgactacgcc
gagctgctcgattctatcgccgatcgtcccgatcacgagatgctgcaaaccatgctgctg
cgctcgatgaagcaggcgatttacgatccggaaaaccgcggccactttggcctcgcgctg
caatcctacgcgcactttacctcgccgattcgccgctacccggatctcacgctgcaccgc
gcgattaagtacctgatcgccaaagagcagggccacgaaggcaacaccaccgagagcggt
ggctggcactacaccatggaagagatgctgcaactgggccagcactgttccatgacggaa
cgccgcgccgacgaagccacccgtgaagtagcggactggctgaagtgcgacttcatgcag
gatcaggtcggccagaccttctccggcgtgatatcaagcgtcaccggctttggtttcttc
gtgcgcctgaccgatctctttatcgatggcctggtgcatgtctcgtcactggataacgac
tactaccgctttgatcaggtcggtcagcggttgattggcgaatccggcggccagacgtac
cgtctgggcgaccgcgtcgaagtcaaagtcgaagcggttaacatggacgagcgcaaaatc
gatttctcgctcatctccagcgaacgcgggccacgtaacgtgggtaaaaccgcgcgcgag
cgcgagaagcgaggcggcggcgctaaaaaccgcagccgtcgtcaggtcggcaaacgtcag
aatttcgaacctaacgaggcatttcgcagtgagaaaggccgtggaaaggtgaagaaagac
ggcgcggcgcgggcagagaagagcgacaaaccggcgaaaagcagtaaaaaaccgtcggcc
aaaacgcagaaaatcgcggccgctactaaagcgaagcgcgcagcgaagaaacagcgcgac
aactaa
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