Sinorhizobium sojae: SJ05684_b44470
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Entry
SJ05684_b44470 CDS
T05052
Name
(GenBank) ATP-dependent DNA ligase clustered with Ku protein, LigD
Organism
esj
Sinorhizobium sojae
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Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DNA_primase_S
AA_synth
DUF5959
Motif
Other DBs
NCBI-ProteinID:
ASY65429
UniProt:
A0A249PJC5
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Position
pSJ05684b:complement(330578..333034)
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AA seq
818 aa
AA seq
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MATSKLEAYRKKRDFSKTPEPAGRLAGDGNRFVVHKHHATSDHYDLRLEVGGVLKSWAVP
KGPSLNPADKRLAVETEDHPLDYIDFEGVIPEGEYGGGPMIVWDTGVWAPMDDIDESLRK
GAFKFRLAGEKLKGGWMLARLKPKPGEEEKRNWLLFKERDPAADPSTDILAARPESVKSG
RRIEELVEKLKPPAKPVKLNPGALPGAAKGPMPARIGPQLATATATPPDSIATREIWLHE
IKFDGYRTMAYKAGDEVRLITRGGLDWTRRYGDLPEAFRRLPCREAIIDGEIVALDDQGV
SHFALLQEALSSGAENRLVFYAFDIVHLDGWNLMNVPLERRKELLKQLLEAHVSTSFAIQ
YSDHVTGEGRAFYAQASEMGLEGIISKRASAPYQSGRSKSWTKTKAPKADDFVIAGYTLS
EAAEGIGALALGEWVDGELKYRGKVGTGFDAAMLKQLRERLEPLREGAAKLEGAPKEIIW
VRPVLTARIHYGNRTTDNVLRHPVFKGLREVELSTPAATGRTRLISDADLAGISITNPTR
RLFGKSGPTKLDVAVYYAAVGDFMLPHILGRPVSLVRCPTGRPQDCFFQRHPFTGMPPSV
AGFEAMSSEGEPKTYLSVEDAKGYLALAQFGVVEFHSWGSTRKRLEKPDRVVFDLDPGEG
IGWREVVEAAVHIRQELEALNLIPFVKTSGGKGIHVVVPIKPKHEWKKVHQATGGIAARL
AATAPETFITTMSKGKRAKRIFIDIHRNARGHTAVAPYSLRARTNLPASTPLNWNDLETI
DAPEDLNYSSLPGLLATSGDPWGEIDAYARDLPLMSGK
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatcgaagctcgaggcctaccgcaagaagcgggatttttcgaagacgccggaa
ccggccggccgccttgccggcgacggcaaccgtttcgtcgtgcataagcaccatgcgaca
tccgatcactacgacctgaggcttgaggtcggcggcgtgctgaaaagctgggctgtgccc
aaagggccgtcgctcaaccctgccgacaaacggctggcggtcgagacggaggatcatccg
ctcgactatatcgacttcgagggcgtgatccccgagggggaatatggcggcgggccgatg
atcgtctgggacacgggtgtctgggcgccgatggacgacattgacgagagcctgcgcaaa
ggcgccttcaagtttcgccttgcgggcgaaaaactcaagggcggctggatgctggcgcgg
ctgaagccgaagcccggtgaagaggaaaagcgcaactggcttctcttcaaggagcgagac
ccggccgccgacccttccacggacattctcgccgcccggccggaaagcgtcaaatccggg
cggcggatcgaggaactggttgagaagcttaaaccgcctgcgaagcccgtcaagctcaac
cccggcgctcttccgggagcggcgaaagggccgatgccggcgaggatcgggccacagctt
gccacggccaccgccacccctccagacagcattgcgactcgcgagatctggctgcacgag
atcaaattcgacggttatcgcaccatggcgtacaaggccggagacgaggtgcggcttatc
acccgcgggggcctggattggacgaggcgctacggcgacctgccggaggcattccgccgc
ctgccgtgtcgcgaggccatcatcgacggcgagatcgtcgcgctcgacgaccaaggagtc
agccacttcgcgcttctgcaggaggcactctcgagcggggcagaaaacaggctggtcttc
tacgccttcgacatcgtccatctcgacggctggaacctcatgaacgtcccgctcgaacgg
cgaaaggaattgctgaagcaattgctcgaggcgcatgtatcgacaagctttgccatccag
tacagcgaccacgtcaccggcgaaggtcgcgctttctacgcgcaagcctccgagatgggc
ctggaagggatcatctcaaagcgcgcatcggcgccctatcagagcggacgctccaagagc
tggaccaagaccaaggcgcccaaggcggatgatttcgtcattgccggctataccctgtcg
gaagccgccgaaggcatcggcgcgctggcgctgggcgagtgggtggacggcgaactgaaa
tatcgcggcaaggtaggcaccggcttcgacgccgcgatgctcaagcagttgcgggagaga
ctggagccgctacgcgagggcgcggcaaagctcgaaggggcgccgaaggagatcatctgg
gtgcggcctgtgctgacggcacgcatccactacggcaaccgcacgacggacaacgtgctt
cgccacccggttttcaagggacttcgggaggtcgagctttcgacgcctgcggcgacgggc
cggacacgcctgatctccgacgccgacctcgccggcatctccatcaccaatccgacgcgc
cgcctgttcggcaagtccgggcccaccaagctcgatgtcgccgtctactacgccgccgtc
ggcgatttcatgctgccgcacatcctcggacgcccggtctcgctcgtgcgctgcccgacg
gggcggccgcaagactgcttcttccagcgccaccccttcaccggcatgccgccttcggtg
gcgggtttcgaggccatgagttcggagggcgagccgaaaacctatctgtcggtggaggac
gcaaagggctacttggcactggcgcaattcggtgtcgtcgaattccatagctgggggtcg
acgcgaaagcggttggaaaagcccgatcgcgtcgtcttcgacctcgatccgggcgaaggc
atcggctggcgcgaggtggtcgaggcggccgttcacatcaggcaggagcttgaagcgctc
aatctcatacccttcgtcaagacgtcgggcggcaagggtatccatgtggtcgtgccgatc
aaaccgaaacatgaatggaagaaagtgcaccaggcgaccggcggcatagccgcccggctc
gcggctaccgcgccggagaccttcatcaccacgatgagcaagggaaaacgtgcaaagcgg
atcttcatcgatatccatcgcaacgcccgcgggcataccgcggttgcgccctattcgctg
cgagcccgcacgaatctgcccgcgtccaccccactcaactggaacgatcttgaaactatc
gacgcccccgaggatttaaactattcttcgcttcccggccttctggccacgtccggcgat
ccctggggcgaaatcgacgcatatgccagggacttgccgctcatgtccgggaagtaa
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