Escherichia coli O104 H4 2011C-3493 (EAEC): O3K_06245
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Entry
O3K_06245 CDS
T02257
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
esl
Escherichia coli O104:H4 2011C-3493 (EAEC)
Pathway
esl00250
Alanine, aspartate and glutamate metabolism
esl00310
Lysine degradation
esl00350
Tyrosine metabolism
esl00650
Butanoate metabolism
esl00760
Nicotinate and nicotinamide metabolism
esl01100
Metabolic pathways
esl01120
Microbial metabolism in diverse environments
Module
esl_M00027
GABA (gamma-Aminobutyrate) shunt
esl_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
esl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
O3K_06245 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
O3K_06245 (gabD)
00310 Lysine degradation
O3K_06245 (gabD)
00350 Tyrosine metabolism
O3K_06245 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
O3K_06245 (gabD)
Enzymes [BR:
esl01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
O3K_06245 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
O3K_06245 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
O3K_06245 (gabD)
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Gene cluster
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AFS73160
UniProt:
A0A0E0XVT7
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All DBs
Position
complement(1279294..1280742)
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AA seq
482 aa
AA seq
DB search
MKLNASNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRA
LPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDRFAEKLQQAVSKLHIGDGLDKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
DERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaacgccagtaacttattccgccagcaggcattgattaacggggaatggctg
gacgccaacaatggcgaggtcatcgacgtcaccaatccggcgaacggcgacaagctgggt
agcgtacccaaaatgggcgctgatgaaacccgcgcggctatcgacgccgccaaccgcgcc
ctgcccgcctggcgcgcgctcaccgccaaagaacgcgccaccattctgcgcaactggttc
aatttgatgatggagcatcaggacgatttagcgcgcctgatgaccctcgaacagggtaaa
ccgctggctgaagcgaaaggcgaaatcagctacgccgcctcctttattgagtggtttgct
gaagaaggcaaacgtatttatggcgacaccattcccggtcatcaggccgataaacgcctg
attgttatcaagcagccgattggcgtcactgctgctatcacgccgtggaactttccggcg
gcgatgattacccgtaaagccggtccggcgctggcggcaggttgcaccatggtgctgaag
cccgccagtcagacgccgttctctgcgctggcgctggcagagctggcgatccgcgcgggc
attccggctggcgtgtttaacgtggtcaccggttcggcgggcgcggtgggtaatgaactg
accagcaacccgctggtacgcaaactgtcgtttaccggctcgaccgaaattggccgccag
ttaatggaacagtgcgcgaaagacatcaaaaaagtgtcgctggagctgggcggcaacgcg
ccgtttatcgtctttgacgatgccgatctcgataaagccgtggaaggcgcgctggcctcg
aaattccgcaacgccgggcaaacctgcgtctgcgccaaccgtttatacgtgcaggacggc
gtgtatgaccgctttgccgaaaaactacagcaggcggtgagcaaactgcacatcggcgac
gggctggataaaggcgtcaccatcgggccgctgatcgatgaaaaagcggtagcaaaagtg
gaagagcatattgccgatgcgctggagaaaggtgcgcgtgtggtttgcggcggtaaagcg
gatgaacgcggcggcaacttcttccagccgaccattctggtggacgtgccggccaacgcc
aaagtgtcgaaagaagagacgttcggccccctcgccccgctgttccgctttaaagatgaa
gccgatgtgattgcgcaagccaatgacaccgagtttggccttgccgcctatttctacgcc
cgtgatttaagccgcgtcttccgcgtgggcgaagcgctggagtacggcatcgtcggcatc
aataccggcattatttccaatgaagtggccccgttcggcggcatcaaagcctcgggtctg
ggtcgtgaaggttcgaagtatggcatcgaagattacttagaaatcaaatatatgtgcatc
ggtctttaa
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