Escherichia coli O104 H4 2009EL-2050 (EAEC): O3M_24490
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Entry
O3M_24490 CDS
T02316
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
esm
Escherichia coli O104:H4 2009EL-2050 (EAEC)
Pathway
esm03030
DNA replication
esm03410
Base excision repair
esm03420
Nucleotide excision repair
esm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
esm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O3M_24490
03410 Base excision repair
O3M_24490
03420 Nucleotide excision repair
O3M_24490
03440 Homologous recombination
O3M_24490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esm03032
]
O3M_24490
03400 DNA repair and recombination proteins [BR:
esm03400
]
O3M_24490
Enzymes [BR:
esm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O3M_24490
DNA replication proteins [BR:
esm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
O3M_24490
DNA repair and recombination proteins [BR:
esm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
O3M_24490
NER (nucleotide excision repair)
GGR (global genome repair) factors
O3M_24490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH
HHH_5
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
AFS59542
LinkDB
All DBs
Position
complement(5078562..5081348)
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK
GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS
LDNISANLVGLSFAIEPSVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN
LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI
ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP
RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE
RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI
HQLMENCTRLDVPLLVEVGSGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccccaaaatccacttatccttgtagatggttcatcttatctttatcgc
gcatatcacgcgtttcccccgctgactaacagcgcaggcgagccgaccggtgcgatgtat
ggtgtcctcaacatgctgcgcagtctgatcatgcaatataaaccgacgcatgcagcggtg
gtctttgacgccaagggaaaaacctttcgtgatgaactgtttgaacattacaaatcacat
cgcccgccaatgccggacgatctgcgagcacaaatcgaacctctgcacgcgatggttaaa
gcgatgggactgccgctgctggcggtttctggcgtagaagcggacgacgttatcggtact
ctggcgcgcgaagccgaaaaagccgggcgtccggtgctgatcagcactggcgataaagat
atggcgcagctggtgacgccaaatattacgcttatcaataccatgacgaataccatcctc
ggaccggaagaggtggtgaataagtacggcgtgccgccagaactgatcatcgatttcctg
gcgctgatgggtgactcctccgataacatccctggcgtaccgggcgtcggtgaaaaaacc
gcgcaggcattgctgcaaggtctgggcgggctggatacgctgtatgccgagccagaaaaa
attgctgggttgagcttccgtggcgcgaaaacaatggcagcgaagctcgagcaaaacaaa
gaagttgcttatctctcataccagctggcgacgattaaaaccgacgttgaactggagctg
acctgtgaacaactggaagtgcagcaaccggcagcggaagagttgttggggctgttcaaa
aagtatgagttcaaacgctggactgctgatgtcgaagcgggcaaatggttacaggccaaa
ggggcaaaaccagccgcgaagccgcaggaaaccagtgttgcagacgaagcgccagaagtg
acggcaacggtgatttcttatgacaactacgtcaccatccttgatgaagaaacactgaaa
gcgtggattgcgaagctggaaaaagcgccggtatttgcatttgataccgaaaccgacagc
cttgataacatctctgctaacctggtcgggctttcttttgctatcgagccaagcgtagcg
gcatatattccggttgctcatgattatcttgatgcgcccgatcaaatctctcgcgagcgt
gcactcgagttgctaaaaccgctgctggaagatgaaaaggcgctgaaggtcgggcaaaac
ctgaaatacgatcgcggtattctggcgaattacggcattgagctgcgtgggattgcgttt
gataccatgctggagtcctacattctcaatagcgttgccgggcgtcacgatatggacagc
ctcgcggaacgttggttgaagcacaaaaccatcacttttgaagagattgcgggtaaaggc
aaaaatcaactgacctttaaccagattgccctcgaagaggccggacgttacgccgccgaa
gatgctgatgtcaccttgcagttgcatctgaaaatgtggccggacctgcaaaaacacaaa
gggccgttgaacgtcttcgagaatatcgaaatgccgctggtgccggtgctttcacgcatt
gaacgtaacggtgtgaagatcgatccgaaagtgctgcacaatcattctgaagagctcacc
ttgcgtctggctgagctggaaaagaaagcgcatgaaattgcaggtgaagaatttaacctt
tcttccaccaagcagttgcaaaccattctgtttgaaaaacagggtattaaaccgctgaag
aaaacgccgggtggcgcgccgtcaacgtcggaagaggtactggaagaactggcgctggac
tatccgttgccaaaagtgattctggagtatcgtggtctggcgaagctgaaatcgacctac
accgacaagctgccgctgatgatcaacccgaaaaccgggcgtgtgcatacctcttatcac
caggcagtaactgcaacgggacgtttatcgtcaaccgatcctaacctgcaaaacattccg
gtgcgtaacgaagaaggtcgtcgtatccgccaggcgtttattgcgccagaggattatgtg
attgtctcagcggactactcgcagattgaactgcgcattatggcgcatctctcgcgtgac
aaaggcttgctgaccgcattcgcggaaggaaaagatatccaccgggcaacggcggcagaa
gtgtttggtttgccactggaaaccgtcaccagcgagcaacgccgtagcgcgaaagcgatc
aactttggtctgatttatggcatgagtgctttcggtctggcgcggcaattgaacattcca
cgtaaagaagcgcagaagtacatggacctttacttcgaacgctaccctggcgtgctggag
tatatggaacgcacccgtgctcaggcgaaagagcagggctacgttgaaacgctggacgga
cgccgtctgtatctgccggatatcaaatccagcaatggtgctcgtcgtgcagcggctgaa
cgtgcagccattaacgcgccaatgcagggaaccgccgccgacattatcaaacgggcgatg
attgccgttgatgcgtggttacaggctgagcaaccgcgtgtacgtatgatcatgcaggta
cacgatgaactggtatttgaagttcataaagatgatgttgatgccgtcgcgaagcagatt
catcaactgatggaaaactgtacccgtctggatgtgccgttgctggtggaagtggggagt
ggcgaaaactgggatcaggcgcactaa
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