Etheostoma spectabile (orangethroat darter): 116692588
Help
Entry
116692588 CDS
T08457
Symbol
rho
Name
(RefSeq) rhodopsin
KO
K04250
rhodopsin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
116692588 (rho)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
esp04030
]
116692588 (rho)
G protein-coupled receptors [BR:
esp04030
]
Rhodopsin family
Vision
Opsin
116692588 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srv
7TM_GPCR_Srsx
7TM_GPCR_Srw
7TM_GPCR_Sru
Motif
Other DBs
NCBI-GeneID:
116692588
NCBI-ProteinID:
XP_032376899
LinkDB
All DBs
Position
7:5535918..5547207
Genome browser
AA seq
354 aa
AA seq
DB search
MNGTEGPNFYVPMSNKTGLVRSPFEHPQYYLAEPWKYSLLAAYMLFLIITAFPINFLTLY
VTIKNKKLRTSLNYVLLNLAVADLFMVNGGFTVTLYTALNGYFVLGVTGCNIEGFFATLG
GEIGLWSLVVLAIERYIVVCKPMTNFRFGEKHAIAGLAFTWIMALTCAVPPLLGWSRYIP
EGMQCSCGIDYYTPKPEIHNTSFVIYMFILHFLIPLIIIFFCYSRLLCAVRAAAAQQQES
ETTQRAEKEVTRMVVIMVISYLVCWMPYASVAWYIFANQGTEFGPVFMTAPAFFAKSAAL
YNPVIYILLNRQFRNSMITTVCCGKNPFGDDEGGTAGTSKTQTSSVSSSQVAPA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcacagaagggcccaacttttatgtccccatgtctaacaagactgggttggtt
cgcagcccatttgagcaccctcagtactacctggctgagccctggaagtactctcttctg
gctgcgtacatgctgttcctcatcattactgccttccccatcaactttctcacactctat
gtcaccatcaaaaacaaaaagctgaggacgtctctgaactatgtcctgctcaacttggcg
gtggccgacctcttcatggtcaatgggggattcacagtcactctctacacagccctgaat
ggatacttcgtcttgggggtcaccggctgcaacatcgagggattctttgccaccttagga
ggagagattggtctctggtctctggtggttttggctattgagcgctacattgtagtctgt
aagccaatgaccaacttccgctttggggagaaacatgccatcgctgggctggcattcaca
tggatcatggccctgacttgtgctgttcccccgctgctcggatggtcccggtacatccca
gagggaatgcagtgttcctgtgggattgactactacactcctaagcctgagatccacaac
acctcatttgtcatctatatgttcatccttcatttccttatcccccttattatcattttt
ttctgctacagtcgtctactctgcgctgtgcgagcggccgcagcccagcagcaagagtct
gaaaccacccagagagcggagaaagaggtgacacgcatggttgtcatcatggtgatctcc
tacctggtgtgctggatgccctatgcatccgtggcttggtacatctttgccaatcaggga
actgagtttggaccagtgtttatgactgctccggctttcttcgccaagagtgctgctctg
tacaacccagtcatctacattctactaaacagacagttcagaaacagcatgatcaccact
gtgtgctgtggaaaaaacccttttggagatgatgagggcggcaccgctggcacctccaaa
actcagacttcgtctgtctcatccagccaagtggcccccgcttga
DBGET
integrated database retrieval system
