Etheostoma spectabile (orangethroat darter): 116701293
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Entry
116701293 CDS
T08457
Symbol
ahdc1
Name
(RefSeq) LOW QUALITY PROTEIN: AT-hook DNA-binding motif-containing protein 1
KO
K22592
AT-hook DNA-binding motif-containing protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116701293 (ahdc1)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116701293 (ahdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
Motif
Other DBs
NCBI-GeneID:
116701293
NCBI-ProteinID:
XP_032390804
LinkDB
All DBs
Position
14:3141529..3148574
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AA seq
1551 aa
AA seq
DB search
MSGLSDHLHSGKTGAPVGFGETQAREKVCVXGLEELTGPELWTRELRFQEGSQYPSNDGL
APVTSDRFPSSLSSLANGLYLQKRLGLSTCRRRQTETHTTAETHISAEKLRNMQTHIDPD
VHAQVVSHAHIDNCGHMDINPHTGSVVPEHSRTLTPEAIHTTSPQPLSLALGNHPASSNL
RAAPVLTAETDNPSTFCPVPIGPTPNTDSSPLPVEAEKKYALRSSGRPRFPCHLRKSSRL
RRSIEDGEKRAGRERGGEGDDDVLEKIWRVKEEEVAVGENEEHSSVEAVLPTSPCPTDIA
LALTVPKNAPKAIPKHGPRLGHKPGPKSRSRPTPKSVHKAAPKSVKQRQAAQSIVHRAPP
HLPFANTSTIAASLQTVKQEPVAELGVSPPNNRRRGRFVGVRKIVVKVARIPVSLSRRQK
SYKISNLETVTGTEKGNDGGLEGSEVVREPTALLRMKNNGKSVMVMFPPGEMPVILKRRR
GRPPKQAVPGIPGELPNAGSAGGNGDQPKKPQRRRRTKLPSPYPSYVNDTNDVKTEYGDV
LSKLAFLNRQPPATGRCSPPRCWTPSEPESFHTPLENPGISTMLHRLTGFRRPRGGRGGG
TGRGGGGAGGIGGSERNKSTFSDFFESIGKKRKPSPLSEHGLPRKRGKGVGGRGGGIVGT
EPGGEKIVRKRRVRRNGAFKGDGVSMGQEWPNGAGGWGQGGMDKEKGLTGYQLCGSPRGG
FSSCEVGRGGAYSSSGGSRGVGPAGEDSQGLFAGYFRSLLDSDDSSDLLDISSSQSDPRK
ASSNPGYEPSSPAAGHSWSPAIPKWSSKGASSGVEGSAQTHCSSARPPYSYGSLAQTSPT
TVSYPKSTPPSLSHSPSSPHPSSFGHYSSGYSSSSPAVPQRLSDCSFAYGSGPSSGKAPT
VGQMGYSSYQAVARRSYGGYSAAGHSSMVRGESTGPTSPGGGYMSVAKSSPFSSSSSPEG
YKQYNSNQWSYRHSFGSWTDNYGPQYHGYSEYGSSESKDILDISNYTPQKAKRQPFPESL
SESSSDSSHLGSAATGSGPSSTCGTYKLNEAASVSGEGVQSSLSSLEKLMMDWHESASGP
SYNWSQNVLFQGGGISKPGRGRRKRTEPQSEKEVCSALHSDSPSSPSPTPTHGPKRGGVG
GRGRGSRGGRGGLSPCQRERPSGAKGRGKAASISGGAVTAAGPEGSGLFQEGLDYYSGDS
SSLSPLATPNPAPSSSYLQDPCEYPSPYSAHPSTPSSEERYPALYPGESSSSLSPSVSSP
PYPPKPTPPPPQSYHPVPSRTFSPSCSPSPRITPHCATTLSPSHRPPPKDPQFSQYDSPS
YCSSPYWYGQTSHSGSPSPHSHSTHSNTAVHTHSNPHSSPHGNTHGNPLASPNVNTHTHM
NPTPHDPHHHNTQPHASLSSHTNTHSTSLLQSNPLSHSNPHTNNQPHHNTHTNPHLPSHT
HSNPSTSIHSHLTPGLYEECSPPSTVTPHKRDLTPHTMSTGHRQGPLPHSPYPKPPLDSS
PHQEDTGGFSLSHQSYQGMGHRYPSQATQGGGVLCQLLDTANDDSFSVTSL
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcttgtcagatcacctacattcaggcaaaactggggctccagtgggttttggt
gagactcaagcaagggaaaaagtgtgtgtgncggggctggaggagctgacagggcctgag
ctctggaccagggagctcaggtttcaggaggggtcccagtatccctctaacgatggactg
gcaccggtgacctccgaccgctttccgtcctctctttcctccctggccaacggcctctat
ctacagaaaaggctggggctcagcacctgccggcgcaggcagacggagactcacactaca
gctgagacacatatatctgcagagaaacttagaaacatgcaaacgcacattgacccagat
gtgcatgcacaggttgtttcacacgcacacatagataattgtggacacatggatatcaac
ccacatacgggttctgtagtgcctgaacactccagaactcttacaccagaggccatacac
acaacctcacctcaacccctgtctttggcacttggcaatcatcctgcctcctctaacctg
cgggcagcaccagtgctcactgcagagacagacaatccctcaaccttttgtccagtccct
attggtccaaccccaaacacagactcctcccctctacctgtggaggcagagaagaagtat
gcactccgcagctctggtcgtccccgctttccctgtcacttgcgcaaatcctcccgcctc
cgccgaagtatagaggatggggagaagagagcagggagggagaggggaggagagggggat
gatgatgtattggagaagatctggagggttaaagaggaggaagtggccgttggagagaat
gaagagcattcgtctgtggaggctgttctccccacatctccctgccctacagacattgct
cttgccctaactgtacccaaaaatgctcctaaagctatccctaaacatggtcccagactt
gggcataaacctggacctaaatccaggtctagacccacaccgaaatctgttcataaagca
gctcctaaaagtgtgaaacagcgccaggcagcccagtccatagttcatcgtgccccacct
catctcccatttgccaacacatccaccatcgctgcatctctgcaaactgtgaagcaggaa
cctgttgcggagttgggggtatctcctcctaataaccggagacgtgggcgctttgtaggc
gtaaggaagattgttgtcaaggtagctcgcattcccgtcagccttagccgccgtcagaag
agctacaagatttccaatttggagacagttacagggacagagaaaggcaatgatggcggt
ctagagggctcagaagtagttcgagagccgaccgcacttctccgaatgaagaacaatggg
aagagtgttatggtgatgttccctcctggagaaatgcctgttattctcaaacgtaggcgg
ggacgaccacctaaacaggctgtgccaggaataccgggagagcttccgaatgcagggagt
gctggtggtaatggcgaccagcccaagaagccccagaggcggcgacggactaaactccct
tccccttatccatcctatgttaatgataccaatgatgtgaaaacagagtatggggatgtt
ctgtccaagctggcctttttaaaccgccagccccctgccactggccgctgttctccccca
cgttgctggacacccagtgagccagaaagctttcatactcccttggaaaaccctggaata
tccaccatgctccaccggctcactgggtttagacgcccccgaggtggcagaggtgggggc
actggaagaggtggaggaggagcaggggggattgggggcagtgagcgcaataagagcacc
ttcagtgacttctttgaatccattgggaagaagcggaaaccaagccccctgtcagagcat
ggattacctaggaaaaggggaaagggtgtgggtggtaggggagggggtattgtgggaact
gagcctgggggagagaaaatagtcaggaagagacgtgtaagaagaaatggtgcatttaaa
ggtgatggggtgtccatggggcaggagtggcccaatggggcaggtggctgggggcagggt
ggtatggacaaggagaaaggtttgactgggtatcagctctgtggatctccaagggggggc
ttttcctcctgtgaggttggaaggggaggtgcctacagcagttcaggaggaagcagaggg
gttgggccagctggggaggactcacaaggcctgtttgctggatatttccggtccctcctt
gactcagatgattcatcagacctgttggacatctcctcttcacagtcagacccccgaaaa
gcttcctcaaaccctggttatgagccatccagtccagctgcaggtcacagttggtcccct
gcgatccccaagtggagctccaagggtgcaagttctggggtagaaggttcagcccagaca
cattgctcctcagccagacctccttacagctatggcagccttgcccaaacctcccccacc
actgtctcctatcccaaatccactcctccatctctctcacactctcctagttctccccat
ccatcctcttttggccactactcctctggatactcatcttcttctcctgcagtgccacag
agattatcagattgcagctttgcatacggatctggacccagcagtggcaaggcccccact
gttggtcaaatgggttattctagctaccaggcagtagccaggcgaagctatggtggatat
tctgcagcaggtcattcctcaatggtacggggggagtcaacaggacccacatcaccagga
ggagggtacatgtctgtggccaaaagtagccccttcagctcctcctcttctccagaaggt
tacaaacagtacaactccaatcagtggagctacagacacagttttggtagctggacagac
aactatggaccgcagtaccatggctacagtgaatatggctccagtgagtccaaagacatc
ttggatatctcaaactacaccccccagaaggccaagcgacaaccttttcctgaaagtcta
tcagaatcctcctctgactcttcacatcttggctctgcagccactggtagtggacctagc
tccacatgcggcacgtacaaactaaatgaggctgcttctgtaagtggagagggtgttcaa
tcaagtctgtccagcttggagaagttgatgatggattggcatgagagtgcttcggggccc
tcgtataactggagccagaacgtcctcttccaaggcgggggaatcagcaaacccggtcgc
ggtcgaaggaaacgtactgaaccacaatcagaaaaagaagtgtgttctgctttacactct
gattccccatccagtccctcccctacacctactcatggacccaagcggggtggggttgga
gggcgagggagagggtctagaggaggtagagggggtttgtctccatgtcagagagagcgg
ccatcaggagccaaaggcaggggcaaggctgcctctatatctggaggagcagtgactgct
gcaggtccagaggggtctgggctgttccaggaggggctggactattacagtggagacagt
agtagtctctctcccctggccactcccaatcctgcaccatcttccagctacctccaggac
ccctgtgagtacccctccccctattctgcccacccatccacaccttcctctgaagagcga
tatccagccttataccctggagagtcctcttcttccctctcacccagtgtctcatctccc
ccttaccctcccaagcccacccctcctccaccccagtcttaccaccctgtcccctccagg
acattctccccctcctgctctccctcaccacggataacaccccactgtgccaccacactt
agtccctcacatcgcccccctcctaaagacccacagttctcgcagtatgactctcccagc
tattgcagctccccctattggtacggacaaacatcgcacagtggcagccccagcccgcac
tctcacagcacacactcaaatacagctgtgcacacacacagcaacccacactcaagtcct
catggaaatacacatggaaatccgctcgctagcccaaatgtgaacacacacacacatatg
aacccgactccccatgacccacaccatcacaatacacagccccacgcaagcctgagctca
cacaccaacacccattccacctccctcctccagagcaaccccctgtcccactcaaacccc
cacaccaacaatcaaccccaccacaatacacataccaaccctcaccttccctcccacaca
cactccaaccccagtaccagcatccactcccacttaacacctgggctttatgaggagtgc
agtcctccctcaaccgtaacaccccacaagcgggatctgaccccccacactatgagcaca
ggccatcgtcagggccccttgcctcactccccataccccaaacctcccctggactcttca
ccccatcaggaagacactggtggcttctccttgtcccaccaatcctaccagggtatggga
caccgctacccctcccaagcaactcagggaggtggggtgctgtgccagcttcttgacaca
gccaatgatgacagcttcagcgttaccagcctgtaa
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